- Transcript 'Phfumi.CG.MTP2014.S7...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S7.g00147.01.t
Possible name(s)
ZIC2; ZIC3; ZIC4
Gene model
Location
S7 [37,841 / 43,950]
Amino acid sequence
Length: 602
>Phfumi.CG.MTP2014.S7.g00147.01.p
MHSTILADRPYAAYDPRASLTPHGGYLGHQGTIDSQHFAFAPPPTASYYSGYGVFPHLQH
QLQAQMQHPVYNREPQQPVNCLQEPVVCKWKTPNHDGGHVCGVIFHDLNDLVNHVTRDHV
GGIEQTDHTCYWGGCSRTGKAFKAKYKLVNHLRVHTGEKPFVCNFPGCGKMFGRSENLKI
HLRVHTGEKPFPCKFPGCDRRFANSSDRKKHSYMHNTEKLYACKIEKLLTKLVNIIMMQS
SIIADRPYAAYDPRAAFPAAHSSFLPHQQPHASFEPQLAFHGAPTASYYSGYGVFPQIPL
QFQHPTPVPVYNPIQSPTVSSLQEPVTCQWKSPNQNSGHVCGVVFHDLNDLVGHMTRDHV
GGIEQTDHTCYWDDCSRTGKAFKAKYKLVNHLRVHTGEKPFVCNFPGCGKTFGRSENLKI
HKRTHTGEKPFPCKFPGCDRRFANSSDRKKHSYMHNTEKLYSCNYEGCDRSYTHPSSLRK
HIRMHESNGDVITSSGSDTSPSTSPHSSRSLPASPQADPAPQTHYPQEIVTSATGMLPSP
TTSLMPNQNWESAGQQAFMTSSSELGQYPTTGYATYEGNTLPQQQQQPYFDFTSIASGFA
HC
Nucleotide sequence
Length: 1,806
>Phfumi.CG.MTP2014.S7.g00147.01.t
ATGCATTCGACTATCTTAGCCGATCGTCCTTACGCAGCTTACGACCCACGGGCCAGTTTA
ACCCCACATGGTGGGTATTTGGGCCACCAAGGGACCATTGACAGCCAGCACTTCGCCTTT
GCACCGCCGCCAACTGCTTCTTATTATTCTGGCTACGGGGTGTTTCCCCACTTGCAGCAC
CAGCTTCAAGCTCAGATGCAACACCCAGTTTACAACAGAGAGCCGCAGCAACCAGTCAAC
TGCCTTCAAGAACCCGTGGTCTGCAAATGGAAAACACCAAACCATGACGGCGGTCACGTG
TGCGGGGTAATCTTCCACGACCTTAATGACCTTGTTAACCACGTGACAAGAGATCACGTG
GGCGGCATCGAGCAAACCGACCACACCTGCTACTGGGGTGGTTGTTCGCGCACTGGCAAG
GCTTTCAAGGCCAAGTACAAGTTGGTGAATCACCTGCGCGTTCACACAGGGGAGAAACCG
TTCGTTTGCAACTTCCCTGGATGCGGAAAAATGTTTGGAAGAAGCGAGAACTTAAAGATC
CACCTTCGTGTTCATACAGGTGAAAAACCGTTTCCTTGCAAATTTCCCGGATGTGATAGA
CGATTCGCAAACAGCTCAGACCGCAAGAAGCACAGCTACATGCACAACACTGAGAAACTT
TACGCCTGCAAGATCGAAAAACTACTTACAAAACTTGTGAACATTATCATGATGCAATCA
TCGATCATCGCTGACCGTCCGTACGCTGCGTACGACCCACGTGCTGCATTCCCGGCTGCT
CACAGTTCTTTTTTGCCCCATCAGCAGCCCCATGCAAGTTTCGAGCCCCAGCTCGCCTTC
CACGGCGCCCCAACTGCTTCGTATTACTCGGGATACGGGGTATTTCCCCAAATCCCCCTT
CAATTCCAACACCCAACGCCAGTTCCCGTCTACAACCCCATCCAGTCACCCACAGTTTCA
TCTCTTCAAGAACCAGTAACCTGTCAATGGAAGTCGCCCAACCAGAACAGCGGTCACGTG
TGCGGAGTGGTTTTCCATGACCTCAATGACCTTGTGGGTCACATGACACGCGATCACGTG
GGCGGCATCGAGCAAACTGACCACACCTGCTACTGGGACGATTGTTCGCGCACTGGCAAG
GCTTTCAAAGCCAAGTACAAGTTGGTGAATCACCTGCGCGTTCACACAGGGGAGAAACCG
TTCGTTTGCAACTTCCCTGGATGCGGGAAGACGTTTGGAAGGAGCGAGAACTTAAAGATC
CACAAAAGAACCCATACCGGAGAAAAACCGTTTCCCTGCAAGTTTCCCGGTTGCGATAGA
CGATTCGCAAACAGCTCCGACCGCAAGAAGCACAGCTACATGCACAACACTGAGAAACTT
TACTCTTGCAACTATGAAGGTTGCGATCGCAGCTACACACATCCGAGCTCACTGCGAAAA
CATATTCGAATGCACGAAAGCAACGGTGACGTCATCACGAGCAGCGGAAGCGACACGTCA
CCATCTACGTCACCGCACTCGTCACGTAGCTTACCGGCGTCACCCCAGGCTGATCCAGCT
CCTCAGACCCACTACCCCCAAGAAATTGTGACGTCAGCCACCGGAATGCTGCCGTCGCCT
ACTACGTCACTAATGCCTAACCAGAACTGGGAATCTGCAGGACAGCAAGCTTTTATGACG
TCATCGAGTGAACTTGGTCAGTACCCAACAACAGGGTATGCAACGTATGAAGGAAATACC
CTGCCGCAGCAACAGCAGCAACCATATTTCGATTTTACCTCTATCGCCTCTGGTTTTGCT
CATTGT
| SMART |
Znf_C2H2_type (IPR013087) - T[99-119] 140.0 - T[128-155] 1.7 - T[161-185] 2.7E-4 - T[191-215] 0.019 - T[339-359] 91.0 - T[368-395] 3.4 - T[401-425] 2.6E-4 - T[431-455] 0.019 - T[461-485] 1.3E-4 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[133-160] 12.653 - T[161-190] 16.311 - T[191-220] 10.533 - T[373-400] 12.986 - T[401-430] 16.623 - T[431-460] 10.533 - T[461-490] 11.344 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[141-196] 1.87E-19 - T[185-221] 3.41E-8 - T[381-437] 1.08E-19 - T[425-481] 1.06E-9 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[161-185] 7.5E-5 - T[401-425] 4.9E-5 - T[461-485] 2.8E-5 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[163-185] . - T[193-215] . - T[403-425] . - T[433-455] . - T[463-485] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZIC4_HUMAN | 61.212 % | 229 | 3.3E-70 |
| ZIC2_HUMAN | 57.143 % | 238 | 3.29E-71 |
| ZIC3_HUMAN | 55.556 % | 240 | 1.35E-72 |