Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S8231.g08035.01.t

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

Phfumi.CG.MTP2014.S8231.g08035

Location

S8231 [5,958 / 7,068]

Sequences

Amino acid sequence

Length: 369

>Phfumi.CG.MTP2014.S8231.g08035.01.p
MASKLFRSLAPRLPMLGSKTTFASQSSAASATEEARVCTLIPGDGIGPEISDAVMKIFDA
AGAPISWEERNVTAMKGPGGKWIIPVEAQESVNKNKVGLKGPLGTPIAAGHPSMNLLLRK
TFDLYANVRPCVSLEGYKTPYDGVNLVTIRENTEGEYSGIEHLIVDGVVQSIKLITESAS
RKVAEFAFDYARKNGRETVTVVHKANIMRMTDGLFLRCCRETAEKNRDIKFNEMYLDTVC
LNIVQDPTQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGTALFESVHGTAPDI
AGKDLANPTALLLSAIMMLRHLGKMNYAGRIEQACFDAIKEKKSRTKDLGGDATCSQFTN
EVCRRVKDL

Nucleotide sequence

Length: 1,110

>Phfumi.CG.MTP2014.S8231.g08035.01.t
ATGGCCTCAAAACTTTTCCGTTCCCTTGCCCCTCGACTGCCCATGCTTGGAAGCAAAACT
ACCTTCGCCAGCCAGTCCTCTGCAGCGTCTGCCACAGAAGAAGCTCGTGTCTGCACTTTG
ATTCCTGGAGACGGCATTGGCCCAGAAATTTCAGATGCTGTGATGAAGATCTTTGATGCT
GCTGGTGCACCCATCAGCTGGGAGGAAAGGAATGTCACTGCCATGAAAGGACCTGGTGGA
AAGTGGATTATCCCAGTTGAAGCACAAGAGTCCGTCAATAAAAACAAAGTTGGTTTAAAA
GGACCTCTTGGCACACCAATTGCCGCTGGTCATCCATCAATGAACCTTCTTTTGAGAAAG
ACGTTCGATTTGTATGCTAATGTACGACCTTGTGTTTCTCTGGAGGGCTACAAGACACCA
TATGATGGCGTTAACCTTGTCACAATCCGAGAAAACACTGAAGGTGAATATTCAGGAATT
GAGCATTTAATTGTTGACGGTGTGGTGCAGAGCATTAAGCTCATTACAGAATCTGCCTCT
CGCAAAGTAGCAGAGTTTGCCTTTGATTATGCAAGAAAGAATGGTCGGGAAACTGTCACT
GTGGTACACAAAGCAAACATCATGCGCATGACTGACGGCCTCTTTCTGCGATGCTGTCGT
GAAACTGCCGAAAAGAACCGTGATATTAAATTCAATGAGATGTATCTTGATACGGTCTGT
CTAAATATTGTTCAAGATCCAACTCAGTTTGATGTCCTGGTGATGCCGAATCTGTATGGT
GATATTTTAAGCGACTTGTGTGCTGGTTTAATCGGAGGGCTAGGTGTTACCCCCAGTGGC
AACATTGGTGCTAATGGAACTGCGCTTTTTGAGTCTGTTCATGGTACAGCACCTGATATT
GCGGGCAAAGATTTAGCTAACCCCACAGCACTTCTACTGTCTGCAATAATGATGCTGCGA
CATCTGGGCAAAATGAATTACGCTGGTCGGATTGAGCAAGCCTGCTTTGATGCCATCAAA
GAAAAGAAATCTCGCACAAAAGATCTTGGAGGTGATGCCACTTGCTCCCAATTTACTAAT
GAGGTCTGTCGCCGGGTTAAAGATCTATGA

InterProScan

SMART	IsoPropMal-DH-like_dom (IPR024084) - T[36-362] 2.4E-166
TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[37-366] 2.3E-148
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[39-362] 1.5E-104
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[257-276] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	42.373 %	281	4.21E-92
IDH3B_HUMAN	44.248 %	279	2.12E-91
IDH3A_HUMAN	82.036 %	583	0