- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phfumi.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S8376.g08070.01.t
Possible name(s)
CIRBP; NCL; RBM3
Gene model
Location
S8376 [13 / 7,813]
Amino acid sequence
Length: 504
>Phfumi.CG.MTP2014.S8376.g08070.01.p
MVQLKAKGKKGKTAIVKPVKIAKVVEEPAQENLKKKKKAKKVVEPVKEESSSEEEEESEE
EEEEVNKVEEDSDDDDDEESEDEKPATKKQKAAGKKKTPAKKEEDSDEEEEEEDDEDDEE
DDDDDEEEEMQTDTNLKRKKKADDEGPAKKQKVDENEETVTMMFTELPEGLDDSSFNKFL
KSKGIQCVSCRANYGRQKAFVDVRKSDMGKALGLHQVEFQGQEIHVKQDMPRQDRGQRAS
GGGDFGGRNRGDRSERDERTLFAKNLPFSADENAVADLFEGVREVRLLTDRDSGRPKGMG
FIEFNSKEEKDSAYERKDDVELEGRSVYLDTITGGGRGGGGGRGRDSFGRGRGGGRGRDS
FGRGGRGGGRGPSTPSKTLFVKGVTEDMTKDSLFGHFDGATDVRIPQDRETGRNKFFAYV
EFNSESDATSIYRNAKGGINVDGNKLYVDYAAERSNDRGGGRGGGRGRGGGRGRGGGRGG
FSAAKNRGSIQSFEGKRTTFDDSD
Nucleotide sequence
Length: 1,512
>Phfumi.CG.MTP2014.S8376.g08070.01.t
ATGGTTCAACTTAAAGCAAAGGGTAAAAAGGGAAAAACTGCAATTGTGAAACCAGTCAAA
ATCGCCAAAGTTGTGGAAGAACCAGCACAAGAAAACCTAAAGAAAAAAAAGAAGGCTAAA
AAGGTTGTAGAACCAGTGAAGGAGGAAAGCTCTTCAGAAGAGGAAGAGGAATCTGAAGAA
GAGGAGGAAGAGGTAAATAAAGTAGAAGAAGATTCAGACGATGACGATGATGAGGAATCC
GAAGATGAAAAGCCTGCAACAAAAAAGCAAAAAGCTGCTGGAAAGAAAAAGACTCCAGCT
AAGAAAGAAGAGGATTCTGATGAGGAAGAAGAGGAGGAGGATGATGAAGACGATGAGGAA
GATGATGACGATGATGAGGAGGAGGAAATGCAAACTGACACAAATCTTAAAAGGAAAAAG
AAAGCAGACGATGAAGGACCAGCCAAAAAACAAAAGGTTGATGAAAATGAAGAAACCGTT
ACTATGATGTTCACGGAACTGCCAGAGGGCCTTGATGATTCTTCATTTAACAAATTCCTA
AAAAGCAAAGGCATTCAGTGTGTGTCATGCAGAGCCAACTATGGGAGACAGAAAGCGTTT
GTCGATGTACGCAAATCGGACATGGGAAAAGCACTGGGATTACACCAAGTCGAATTTCAG
GGTCAGGAAATTCATGTGAAGCAAGATATGCCACGACAGGACAGGGGCCAGAGAGCAAGT
GGAGGTGGCGACTTTGGTGGACGAAACCGGGGTGATCGCAGCGAACGTGACGAGCGCACT
TTGTTTGCTAAAAACTTGCCCTTCAGTGCTGATGAAAACGCGGTTGCCGATCTTTTTGAG
GGAGTACGGGAGGTTCGACTTCTTACAGATCGTGACAGTGGAAGACCCAAGGGAATGGGT
TTCATCGAGTTCAACTCGAAAGAGGAGAAAGATTCCGCGTACGAACGCAAGGACGACGTA
GAGCTGGAAGGAAGATCGGTTTACCTGGATACCATCACCGGCGGTGGGCGTGGAGGAGGC
GGTGGCCGTGGACGGGACAGCTTCGGTCGGGGACGAGGCGGTGGTCGAGGACGGGACAGT
TTTGGACGTGGTGGTCGTGGTGGCGGTAGAGGGCCATCCACGCCAAGCAAAACGTTGTTC
GTGAAAGGAGTGACTGAAGATATGACGAAAGATTCACTTTTCGGACATTTCGATGGTGCC
ACTGACGTGAGAATACCCCAGGATCGCGAAACCGGCAGAAACAAATTTTTCGCTTATGTT
GAGTTCAATTCAGAGAGCGACGCGACTTCAATTTACAGGAACGCTAAGGGTGGAATCAAC
GTGGATGGCAACAAACTGTACGTCGACTACGCTGCAGAACGTAGCAACGACCGAGGCGGA
GGTCGAGGTGGTGGGCGTGGTCGCGGCGGGGGGCGTGGCAGAGGCGGCGGCCGTGGAGGT
TTCAGCGCAGCTAAGAACCGTGGTAGCATCCAGAGCTTTGAAGGCAAAAGAACCACCTTC
GACGACTCCGAC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[157-327] 9.2E-20 - T[239-307] 9.2E-20 - T[369-480] 5.3E-20 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[160-254] 3.8E-5 - T[255-364] 4.57E-21 - T[373-481] 1.2E-21 |
| SMART |
RRM_dom (IPR000504) - T[161-227] 2.8 - T[260-330] 4.5E-14 - T[378-449] 5.1E-14 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[259-334] 14.914 - T[377-453] 13.754 |
| Pfam |
RRM_dom (IPR000504) - T[261-327] 1.3E-9 - T[379-446] 2.4E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUCL_HUMAN | 30.241 % | 106 | 3.03E-24 |