- Region 'REG00000402' >
- Transcript 'KH2012:KH.C2.725.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S8463.g08105.01.t
Possible name(s)
RNASEH1
Gene model
Location
S8463 [5,020 / 6,425]
Amino acid sequence
Length: 256
>Phfumi.CG.MTP2014.S8463.g08105.01.p
FGMGSFYAVHVGRKKGVFNTWSECESLVKGFKGAKYKKFATLAAAQYFSKFGNETKQSDC
AKKARATSTPCSITRGKRKMAPAASQHLNKRLKTSLDGEKGLNTMNDNNDLIVVYTDGAC
SGNGKMNCQAGYGVWWGPDHPLNLSCKLKGIQTNQRAEIAAINACIKQAKENKYKKILVR
TDSMFVINCITKWVPGWKKRNWIKADGKPVIHKPEFMEMLNNMKDVKVTFEHVYGHKGEV
GNEMADQLAVQGIGKT
Nucleotide sequence
Length: 768
>Phfumi.CG.MTP2014.S8463.g08105.01.t
TTTGGTATGGGATCATTTTACGCAGTACATGTTGGTAGAAAAAAAGGTGTTTTCAACACT
TGGTCTGAGTGCGAATCACTTGTAAAAGGATTTAAAGGAGCAAAATACAAGAAGTTCGCA
ACACTTGCCGCAGCGCAATATTTCTCGAAATTTGGCAATGAAACAAAACAATCGGATTGT
GCAAAGAAAGCAAGAGCAACCTCTACACCATGTTCAATTACTAGAGGAAAGCGAAAAATG
GCTCCTGCAGCCTCACAACACCTCAACAAGCGGCTAAAAACTTCACTTGATGGCGAAAAA
GGGTTGAACACAATGAATGACAACAATGACCTAATAGTTGTATACACAGATGGGGCATGT
TCTGGTAATGGAAAAATGAATTGCCAGGCTGGATACGGAGTGTGGTGGGGTCCTGATCAC
CCATTAAATCTATCCTGTAAATTGAAAGGAATTCAAACCAACCAGAGGGCAGAAATTGCT
GCTATCAATGCATGCATTAAGCAAGCGAAGGAGAATAAATACAAAAAAATACTGGTTCGC
ACTGACTCTATGTTTGTCATCAATTGTATAACAAAATGGGTTCCGGGTTGGAAAAAGCGA
AATTGGATCAAAGCAGATGGAAAACCAGTTATTCATAAGCCAGAGTTTATGGAAATGTTA
AACAACATGAAAGATGTAAAAGTGACATTTGAACATGTGTATGGCCATAAAGGTGAAGTT
GGAAATGAAATGGCTGATCAATTGGCAGTTCAGGGGATAGGAAAAACT
| PIRSF |
RNase_H1_euk (IPR017067) - T[1-256] 1.4E-72 |
| Gene3D |
RNase_H1_N_sf (IPR037056) - T[2-51] 1.7E-19 |
| SUPERFAMILY |
Ribosomal_L9/RNase_H1_N (IPR009027) - T[5-48] 1.31E-13 |
| Pfam |
RNase_H1_N (IPR011320) - T[6-48] 1.1E-18 |
| Gene3D |
RNaseH_sf (IPR036397) - T[106-255] 2.7E-52 |
| ProSiteProfiles |
RNaseH_domain (IPR002156) - T[108-254] 23.972 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[110-254] 4.55E-44 |
| Pfam |
RNaseH_domain (IPR002156) - T[112-253] 4.8E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNH1_HUMAN | 42.205 % | 192 | 1.01E-60 |