- Transcript 'KH2012:KH.C1.334.v1....' >
- Transcript 'KH2012:KH.L153.20.v2...' >
- Transcript 'KH2012:KH.C1.263.v1....' >
- Clone 'AHC0AAA134YL04' >
- Transcript 'Phfumi.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S88.g00915.01.t
Possible name(s)
DSCAM; DSCAML1; NPHS1
Gene model
Location
S88 [60,494 / 68,710]
Amino acid sequence
Length: 1,451
>Phfumi.CG.MTP2014.S88.g00915.01.p
IKNVTIADDAFYECQDPTLKIRSRKAYINVLVPPSQLVISPTDGENRITVRENEPVTIHC
RAVASKPAAGITWRVGINQVFRPVINETTPGSKLTTSSSAMSMTPSRFHNGTTVQCLATH
PALHRMISATATFNVLYPPGNPTLGNFEEQRLFIAGSNLSLECVSHGGNPLASITWKVGE
HTVPGEVKTFGDQAIGVLRYLLQPDDDGKTVTCTVNSPALSTPLVTDTKINVRYPPAEIL
VSQHPLGGVFENSSASLTCRTTQSNPRAALTWYRDGEPIAGNTGEVIVTQFDLTSHSQST
LMMTRVNRFDAKSVFTCHSSIPELGYEKDTEARINVNYAPLHVNLRVYHIAERKDQSRLH
AGQTIQLKCTASGGNPAPTLKWYRDGRAISTDDETVTRIDPNQVLDCNSESVTCSVIEIV
LTANDNGHKFDCHADHVASNVPKHDSVVLEVLYAPKSVKISQFPQTLVSGERMSLVCETS
PSYPASVITWLKDGELIEFNKGNTASGADSSVVNSNRPTNNGIGFISRSQLYLTPSSKFD
GSRITCRASNVEVRKYTDGFVILNVKFSPIISTTALTFNTTLHNREFVIDIPVQANPSNV
TFRWWKYIPLHQSRISSKPRDRLLVNGVTSLWGQKVALQSSERIHWLEDSGELRIHNVRN
DDGGLYQVEVSNARGSVAANFTIDVLYSPTILALAGPTQVQVGGDAILTCGFKGHPLLKT
EVHWTKVVVNPRRESFDIKTNINSSTLILRNVTSYDRGEYRCVASNGIGSAAERLVFLTV
KFGAVIDPLRSTTKVARPPASGEKTTVELVCTAKGNPRVLFAWKAADGSDIVSGVSDSLE
TGYVIDEASYVNDVYTSKLFINTRVVHSDETLVAKFRCLAINSLGRDETEVKLVPRGAPD
APSDVVVTNVTHDAIALSWRAGFDGGAPQTFLLQYKIVLGSTTKCDFDDKTDDWSQINVS
HSRTNYVIEGLRQSTSYAMCMLAFNSFGRSGVTRIQMISTKSKSNLLSGFAAVNHLPTNY
LLIIAASSALILVILIILVVVIVRRLRQNNAHKSQSVRTESDSLPTPNASLTGSENAESM
RVAQETSSFMHDSNMECDTSRGPRRFNGNGQSLERNSTSRVAYSADGMSGGQSDISNYDL
RHLPYHQAQRSSRDTSGSSLLHDEIAYTNEMYQRCGAMPRNRYSDAGQLSPPASIPTSAE
RDRFMDRCSVDMLLCDNMQQSTPNCQHSMDWDTCVRCIKERSGAPVPSGRYCDILRHAGE
IKNPAVQRYHTLSLNPKRQDPREHPLYPPVHDNIPTQNSSAIDNPLQQDQFLNPTNCQTL
PSMLRSYSSSSFLNSKRRYFFDDRCYQLQPLLSPELSSEAKYESSRDALYAVNVHDAPKR
LSPDLPNESGLYVLDVEHCAENGCEARGGLGASTPPYPVQNGIPCVRNSWISSSSSTSDY
GSQKSGTREKQ
Nucleotide sequence
Length: 4,353
>Phfumi.CG.MTP2014.S88.g00915.01.t
ATAAAAAATGTGACCATTGCTGATGATGCCTTTTATGAATGCCAAGACCCAACACTAAAA
ATTCGCTCCAGAAAAGCTTACATCAACGTGTTGGTTCCACCCAGTCAACTTGTCATTTCA
CCTACTGATGGGGAAAACAGAATTACAGTGAGAGAAAACGAACCGGTTACCATCCATTGC
AGAGCAGTGGCAAGCAAACCAGCTGCTGGCATTACATGGAGGGTTGGAATTAATCAAGTT
TTTCGACCAGTGATTAATGAAACCACACCAGGTAGCAAGTTGACAACAAGCAGCAGCGCC
ATGTCCATGACCCCGTCCCGGTTCCACAACGGCACGACGGTGCAATGCCTGGCCACTCAT
CCTGCTTTACACCGAATGATTTCTGCAACTGCAACATTCAACGTTTTGTACCCACCCGGC
AATCCAACCCTGGGGAATTTCGAGGAGCAACGACTGTTCATTGCTGGTTCGAACTTGTCG
CTAGAGTGCGTGAGTCATGGTGGAAATCCCCTTGCTTCCATAACCTGGAAAGTGGGGGAA
CACACTGTACCCGGAGAAGTCAAAACATTTGGTGATCAGGCTATAGGCGTCCTACGTTAT
CTCTTGCAACCTGATGACGATGGAAAAACAGTCACGTGCACAGTAAATAGTCCTGCCCTG
TCCACCCCGCTCGTGACAGACACAAAGATAAACGTTCGTTATCCACCAGCAGAAATTTTG
GTTTCGCAACACCCGCTAGGTGGCGTGTTTGAAAACAGTTCCGCCTCACTGACATGCAGA
ACTACACAAAGTAATCCAAGAGCGGCTTTAACATGGTATCGCGACGGTGAACCAATCGCA
GGCAACACTGGTGAAGTAATCGTGACGCAATTTGACCTGACGTCACACTCTCAAAGCACA
CTGATGATGACGCGCGTGAATCGTTTCGACGCGAAAAGTGTTTTTACCTGTCACTCATCG
ATTCCAGAACTTGGATACGAGAAAGATACGGAAGCTCGTATAAACGTCAACTACGCCCCT
CTTCATGTGAATCTGCGAGTGTACCACATCGCTGAAAGAAAAGATCAGTCAAGACTTCAC
GCTGGACAAACGATACAGTTGAAATGTACTGCAAGCGGTGGAAACCCAGCACCGACTTTA
AAGTGGTACCGTGACGGTCGTGCAATTTCAACCGATGACGAAACCGTGACGCGGATCGAC
CCTAATCAAGTGCTGGATTGTAACTCCGAAAGTGTCACGTGTAGCGTCATAGAAATCGTA
CTTACCGCGAATGATAACGGACACAAGTTTGATTGTCACGCCGATCACGTGGCCTCGAAC
GTTCCCAAGCATGACAGCGTTGTTCTCGAGGTTTTGTATGCGCCGAAGTCTGTGAAGATA
TCCCAATTTCCTCAGACCTTGGTTAGCGGGGAACGAATGAGTCTGGTTTGTGAAACGTCA
CCAAGTTATCCAGCTTCAGTTATTACGTGGCTGAAGGACGGCGAACTGATCGAGTTTAAT
AAAGGCAACACAGCAAGCGGTGCCGATTCTTCTGTTGTAAACAGTAACCGACCGACTAAC
AACGGGATCGGATTTATCAGCAGAAGTCAACTTTATTTAACGCCTTCTTCTAAATTTGAC
GGATCTAGAATAACTTGCAGGGCCAGCAACGTTGAAGTGAGAAAATATACCGATGGATTT
GTTATTCTGAACGTCAAGTTTTCGCCGATCATATCTACCACGGCACTGACTTTTAACACT
ACGCTACACAACCGAGAGTTTGTCATCGATATTCCCGTCCAAGCTAATCCGAGCAATGTC
ACCTTTCGTTGGTGGAAATACATCCCTTTGCACCAATCACGCATTTCTTCCAAACCACGT
GACAGGCTGTTGGTCAATGGCGTGACTTCTTTGTGGGGACAAAAGGTAGCGCTCCAAAGC
AGTGAAAGAATCCATTGGTTGGAAGACAGTGGCGAACTTAGGATTCACAACGTTCGAAAC
GATGATGGCGGGTTGTATCAGGTTGAAGTGAGCAACGCCAGAGGTTCAGTCGCAGCAAAC
TTCACGATCGATGTATTATATTCACCGACAATTTTGGCATTGGCGGGACCAACTCAAGTT
CAAGTAGGAGGTGACGCAATACTTACTTGTGGATTTAAAGGTCACCCGCTTCTAAAAACG
GAAGTCCATTGGACAAAAGTGGTCGTCAATCCACGTAGAGAATCTTTTGACATCAAAACC
AATATAAATTCTAGCACCTTAATTTTGCGCAACGTGACGTCATACGACAGAGGGGAATAC
CGCTGTGTAGCATCAAACGGAATTGGATCGGCAGCCGAACGGCTCGTGTTTCTCACAGTA
AAATTTGGAGCCGTGATCGATCCACTTCGATCGACGACTAAAGTAGCTCGACCGCCCGCT
AGCGGCGAAAAAACAACTGTCGAGCTTGTGTGCACGGCCAAGGGGAATCCCCGGGTTTTG
TTCGCATGGAAGGCTGCTGACGGATCGGATATTGTTTCTGGAGTTAGCGACAGTTTGGAA
ACTGGCTACGTCATCGATGAAGCAAGTTATGTTAACGACGTGTACACGAGTAAACTTTTC
ATTAATACCCGAGTTGTGCACTCGGACGAAACTCTGGTTGCAAAGTTTCGTTGCCTAGCG
ATCAACTCACTTGGTCGGGACGAAACAGAAGTAAAACTTGTTCCAAGAGGCGCCCCAGAT
GCACCCAGTGACGTCGTAGTTACAAACGTGACGCATGATGCAATTGCTTTGTCATGGCGA
GCCGGTTTCGATGGAGGAGCCCCACAAACGTTTCTGTTGCAATACAAAATTGTTCTCGGC
TCAACAACTAAATGCGATTTCGATGACAAAACAGATGACTGGTCACAAATAAACGTATCA
CATAGTCGAACCAACTACGTCATCGAAGGATTGCGTCAGTCTACGTCATACGCAATGTGC
ATGCTTGCGTTTAACAGCTTCGGAAGAAGCGGTGTCACTAGAATACAGATGATATCAACG
AAAAGTAAGTCGAATCTTTTATCAGGGTTCGCTGCAGTGAATCATCTTCCAACTAACTAC
TTACTAATCATTGCCGCTTCCTCGGCACTTATCCTTGTCATCCTAATTATTTTGGTTGTC
GTCATTGTAAGAAGGCTTCGTCAAAATAACGCCCACAAATCCCAAAGTGTTCGCACAGAA
AGTGACAGTTTGCCGACACCCAACGCGAGCTTGACCGGTAGTGAGAACGCTGAATCCATG
CGAGTCGCACAGGAAACATCGTCTTTCATGCATGATAGCAACATGGAATGCGACACCTCC
AGAGGACCTCGTCGCTTTAATGGCAACGGACAGTCACTAGAGCGGAACAGTACGTCACGT
GTTGCTTACAGCGCTGATGGGATGAGTGGTGGGCAATCGGACATCTCCAATTATGATTTA
CGCCACTTGCCGTATCACCAAGCGCAAAGGTCGTCACGTGACACAAGCGGCAGCTCCCTT
CTTCACGACGAAATCGCCTACACCAATGAAATGTACCAACGATGTGGTGCAATGCCAAGA
AACAGATACAGTGACGCTGGTCAGCTTTCGCCCCCAGCTTCCATCCCGACCTCAGCAGAA
CGTGACCGCTTCATGGACCGATGTAGTGTCGATATGCTTCTGTGCGACAACATGCAACAG
TCAACCCCAAATTGCCAGCACTCGATGGACTGGGACACGTGTGTACGTTGCATAAAAGAA
CGGAGTGGAGCACCTGTTCCGTCAGGGAGATATTGTGATATACTTCGGCATGCTGGGGAA
ATAAAAAACCCTGCAGTTCAACGCTACCACACCTTATCCCTTAACCCAAAACGGCAAGAT
CCACGAGAGCACCCACTGTACCCTCCCGTGCACGACAACATTCCGACGCAAAACTCCTCC
GCGATCGACAACCCACTGCAGCAAGACCAATTTCTTAACCCTACCAACTGTCAGACACTT
CCATCGATGCTTCGTTCATACTCTTCCTCTTCGTTTCTCAACTCAAAACGGCGATATTTC
TTTGATGATCGCTGTTACCAGCTTCAGCCTCTTCTGTCGCCGGAGCTGAGTTCCGAGGCT
AAATACGAGAGCTCCCGCGACGCTTTGTATGCAGTTAACGTTCACGATGCGCCAAAGCGG
TTGTCGCCAGATTTGCCAAATGAGAGCGGTTTGTACGTTTTGGATGTTGAACATTGTGCC
GAGAACGGGTGCGAAGCCCGCGGGGGCTTGGGGGCCAGCACTCCACCGTATCCAGTTCAA
AACGGCATTCCATGCGTCAGAAACAGCTGGATATCCTCTTCTTCGTCGACATCTGATTAT
GGCTCGCAGAAATCCGGTACCCGGGAAAAACAG
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[33-139] 4.22E-13 - T[138-236] 6.95E-12 - T[236-340] 5.49E-12 - T[358-455] 6.83E-13 - T[455-569] 1.86E-12 - T[580-691] 3.23E-9 - T[682-781] 1.03E-15 - T[803-902] 6.55E-6 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[34-128] 9.174 - T[142-231] 8.248 - T[235-335] 10.045 - T[340-448] 11.297 - T[455-557] 11.715 - T[689-779] 11.533 - T[788-894] 7.195 |
| Gene3D |
Ig-like_fold (IPR013783) - T[41-141] 5.5E-19 - T[145-238] 5.4E-14 - T[240-342] 3.6E-14 - T[349-459] 1.8E-19 - T[460-571] 2.2E-14 - T[576-692] 3.7E-9 - T[694-787] 3.8E-14 - T[792-889] 3.9E-6 - T[890-1004] 3.0E-16 |
| SMART |
Ig_sub (IPR003599) - T[45-136] 0.2 - T[148-233] 44.0 - T[244-337] 0.29 - T[354-452] 19.0 - T[462-566] 0.11 - T[612-686] 0.22 - T[695-781] 1.5E-10 |
| Pfam |
CD80_C2-set (IPR013162) - T[46-125] 6.1E-8 - T[252-322] 3.5E-6 - T[358-440] 8.9E-9 - T[466-552] 6.7E-8 |
| SMART |
Ig_sub2 (IPR003598) - T[51-123] 0.14 - T[250-324] 0.7 - T[360-439] 0.65 - T[468-553] 0.88 - T[701-769] 3.4E-5 - T[802-885] 1.9 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[887-1000] 4.13E-16 |
| SMART |
FN3_dom (IPR003961) - T[899-990] 4.1E-9 |
| CDD |
FN3_dom (IPR003961) - T[899-1000] 1.13521E-10 |
| Pfam |
FN3_dom (IPR003961) - T[900-988] 3.9E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[901-1003] 15.361 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DSCL1_HUMAN | 22.732 % | 114 | 2.18E-25 |
| DSCAM_HUMAN | 22.012 % | 118 | 2.1E-26 |
| NPHN_HUMAN | 28.782 % | 350 | 1.78E-100 |