- Transcript 'KH2012:KH.C8.38.v6.A...' >
- Transcript 'Moocci.CG.ELv1_2.S62...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.C11.535.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S88.g00915.02.t
Possible name(s)
DSCAM; DSCAML1; NPHS1
Gene model
Location
S88 [60,494 / 68,731]
Amino acid sequence
Length: 1,412
>Phfumi.CG.MTP2014.S88.g00915.02.p
TGVQNLLIKNVTIADDAFYECQDPTLKIRSRKAYINVLVPPSQLVISPTDGENRITVREN
EPVTIHCRAVASKPAAGITWRVGINQVFRPVINETTPDPPGNPTLGNFEEQRLFIAGSNL
SLECVSHGGNPLASITWKVGEHTVPGEVKTFGDQAIGVLRYLLQPDDDGKTVTCTVNSPA
LSTPLVTDTKINVRYPPAEILVSQHPLGGVFENSSASLTCRTTQSNPRAALTWYRDGEPI
AGNTGEVIVTQFDLTSHSQSTLMMTRVNRFDAKSVFTCHSSIPELGYEKDTEARINVNYA
PLHVNLRVYHIAERKDQSRLHAGQTIQLKCTASGGNPAPTLKWYRDGRAISTDDETVTRI
DPNQVLDCNSESVTCSVIEIVLTANDNGHKFDCHADHVASNVPKHDSVVLEVLYAPKSVK
ISQFPQTLVSGERMSLVCETSPSYPASVITWLKDGELIEFNKGNTASGADSSVVNSNRPT
NNGIGFISRSQLYLTPSSKFDGSRITCRASNVEVRKYTDGFVILNVKFSPIISTTALTFN
TTLHNREFVIDIPVQANPSNVTFRWWKYIPLHQSRISSKPRDRLLVNGVTSLWGQKVALQ
SSERIHWLEDSGELRIHNVRNDDGGLYQVEVSNARGSVAANFTIDVLYSPTILALAGPTQ
VQVGGDAILTCGFKGHPLLKTEVHWTKVVVNPRRESFDIKTNINSSTLILRNVTSYDRGE
YRCVASNGIGSAAERLVFLTVKFGAVIDPLRSTTKVARPPASGEKTTVELVCTAKGNPRV
LFAWKAADGSDIVSGVSDSLETGYVIDEASYVNDVYTSKLFINTRVVHSDETLVAKFRCL
AINSLGRDETEVKLVPRGAPDAPSDVVVTNVTHDAIALSWRAGFDGGAPQTFLLQYKIVL
GSTTKCDFDDKTDDWSQINVSHSRTNYVIEGLRQSTSYAMCMLAFNSFGRSGVTRIQMIS
TKSKSNLLSGFAAVNHLPTNYLLIIAASSALILVILIILVVVIVRRLRQNNAHKSQSVRT
ESDSLPTPNASLTGSENAESMRVAQETSSFMHDSNMECDTSRGPRRFNGNGQSLERNSTS
RVAYSADGMSGGQSDISNYDLRHLPYHQAQRSSRDTSGSSLLHDEIAYTNEMYQRCGAMP
RNRYSDAGQLSPPASIPTSAERDRFMDRCSVDMLLCDNMQQSTPNCQHSMDWDTCVRCIK
ERSGAPVPSGRYCDILRHAGEIKNPAVQRYHTLSLNPKRQDPREHPLYPPVHDNIPTQNS
SAIDNPLQQDQFLNPTNCQTLPSMLRSYSSSSFLNSKRRYFFDDRCYQLQPLLSPELSSE
AKYESSRDALYAVNVHDAPKRLSPDLPNESGLYVLDVEHCAENGCEARGGLGASTPPYPV
QNGIPCVRNSWISSSSSTSDYGSQKSGTREKQ
Nucleotide sequence
Length: 4,236
>Phfumi.CG.MTP2014.S88.g00915.02.t
ACAGGTGTACAGAATTTGCTGATAAAAAATGTGACCATTGCTGATGATGCCTTTTATGAA
TGCCAAGACCCAACACTAAAAATTCGCTCCAGAAAAGCTTACATCAACGTGTTGGTTCCA
CCCAGTCAACTTGTCATTTCACCTACTGATGGGGAAAACAGAATTACAGTGAGAGAAAAC
GAACCGGTTACCATCCATTGCAGAGCAGTGGCAAGCAAACCAGCTGCTGGCATTACATGG
AGGGTTGGAATTAATCAAGTTTTTCGACCAGTGATTAATGAAACCACACCAGACCCACCC
GGCAATCCAACCCTGGGGAATTTCGAGGAGCAACGACTGTTCATTGCTGGTTCGAACTTG
TCGCTAGAGTGCGTGAGTCATGGTGGAAATCCCCTTGCTTCCATAACCTGGAAAGTGGGG
GAACACACTGTACCCGGAGAAGTCAAAACATTTGGTGATCAGGCTATAGGCGTCCTACGT
TATCTCTTGCAACCTGATGACGATGGAAAAACAGTCACGTGCACAGTAAATAGTCCTGCC
CTGTCCACCCCGCTCGTGACAGACACAAAGATAAACGTTCGTTATCCACCAGCAGAAATT
TTGGTTTCGCAACACCCGCTAGGTGGCGTGTTTGAAAACAGTTCCGCCTCACTGACATGC
AGAACTACACAAAGTAATCCAAGAGCGGCTTTAACATGGTATCGCGACGGTGAACCAATC
GCAGGCAACACTGGTGAAGTAATCGTGACGCAATTTGACCTGACGTCACACTCTCAAAGC
ACACTGATGATGACGCGCGTGAATCGTTTCGACGCGAAAAGTGTTTTTACCTGTCACTCA
TCGATTCCAGAACTTGGATACGAGAAAGATACGGAAGCTCGTATAAACGTCAACTACGCC
CCTCTTCATGTGAATCTGCGAGTGTACCACATCGCTGAAAGAAAAGATCAGTCAAGACTT
CACGCTGGACAAACGATACAGTTGAAATGTACTGCAAGCGGTGGAAACCCAGCACCGACT
TTAAAGTGGTACCGTGACGGTCGTGCAATTTCAACCGATGACGAAACCGTGACGCGGATC
GACCCTAATCAAGTGCTGGATTGTAACTCCGAAAGTGTCACGTGTAGCGTCATAGAAATC
GTACTTACCGCGAATGATAACGGACACAAGTTTGATTGTCACGCCGATCACGTGGCCTCG
AACGTTCCCAAGCATGACAGCGTTGTTCTCGAGGTTTTGTATGCGCCGAAGTCTGTGAAG
ATATCCCAATTTCCTCAGACCTTGGTTAGCGGGGAACGAATGAGTCTGGTTTGTGAAACG
TCACCAAGTTATCCAGCTTCAGTTATTACGTGGCTGAAGGACGGCGAACTGATCGAGTTT
AATAAAGGCAACACAGCAAGCGGTGCCGATTCTTCTGTTGTAAACAGTAACCGACCGACT
AACAACGGGATCGGATTTATCAGCAGAAGTCAACTTTATTTAACGCCTTCTTCTAAATTT
GACGGATCTAGAATAACTTGCAGGGCCAGCAACGTTGAAGTGAGAAAATATACCGATGGA
TTTGTTATTCTGAACGTCAAGTTTTCGCCGATCATATCTACCACGGCACTGACTTTTAAC
ACTACGCTACACAACCGAGAGTTTGTCATCGATATTCCCGTCCAAGCTAATCCGAGCAAT
GTCACCTTTCGTTGGTGGAAATACATCCCTTTGCACCAATCACGCATTTCTTCCAAACCA
CGTGACAGGCTGTTGGTCAATGGCGTGACTTCTTTGTGGGGACAAAAGGTAGCGCTCCAA
AGCAGTGAAAGAATCCATTGGTTGGAAGACAGTGGCGAACTTAGGATTCACAACGTTCGA
AACGATGATGGCGGGTTGTATCAGGTTGAAGTGAGCAACGCCAGAGGTTCAGTCGCAGCA
AACTTCACGATCGATGTATTATATTCACCGACAATTTTGGCATTGGCGGGACCAACTCAA
GTTCAAGTAGGAGGTGACGCAATACTTACTTGTGGATTTAAAGGTCACCCGCTTCTAAAA
ACGGAAGTCCATTGGACAAAAGTGGTCGTCAATCCACGTAGAGAATCTTTTGACATCAAA
ACCAATATAAATTCTAGCACCTTAATTTTGCGCAACGTGACGTCATACGACAGAGGGGAA
TACCGCTGTGTAGCATCAAACGGAATTGGATCGGCAGCCGAACGGCTCGTGTTTCTCACA
GTAAAATTTGGAGCCGTGATCGATCCACTTCGATCGACGACTAAAGTAGCTCGACCGCCC
GCTAGCGGCGAAAAAACAACTGTCGAGCTTGTGTGCACGGCCAAGGGGAATCCCCGGGTT
TTGTTCGCATGGAAGGCTGCTGACGGATCGGATATTGTTTCTGGAGTTAGCGACAGTTTG
GAAACTGGCTACGTCATCGATGAAGCAAGTTATGTTAACGACGTGTACACGAGTAAACTT
TTCATTAATACCCGAGTTGTGCACTCGGACGAAACTCTGGTTGCAAAGTTTCGTTGCCTA
GCGATCAACTCACTTGGTCGGGACGAAACAGAAGTAAAACTTGTTCCAAGAGGCGCCCCA
GATGCACCCAGTGACGTCGTAGTTACAAACGTGACGCATGATGCAATTGCTTTGTCATGG
CGAGCCGGTTTCGATGGAGGAGCCCCACAAACGTTTCTGTTGCAATACAAAATTGTTCTC
GGCTCAACAACTAAATGCGATTTCGATGACAAAACAGATGACTGGTCACAAATAAACGTA
TCACATAGTCGAACCAACTACGTCATCGAAGGATTGCGTCAGTCTACGTCATACGCAATG
TGCATGCTTGCGTTTAACAGCTTCGGAAGAAGCGGTGTCACTAGAATACAGATGATATCA
ACGAAAAGTAAGTCGAATCTTTTATCAGGGTTCGCTGCAGTGAATCATCTTCCAACTAAC
TACTTACTAATCATTGCCGCTTCCTCGGCACTTATCCTTGTCATCCTAATTATTTTGGTT
GTCGTCATTGTAAGAAGGCTTCGTCAAAATAACGCCCACAAATCCCAAAGTGTTCGCACA
GAAAGTGACAGTTTGCCGACACCCAACGCGAGCTTGACCGGTAGTGAGAACGCTGAATCC
ATGCGAGTCGCACAGGAAACATCGTCTTTCATGCATGATAGCAACATGGAATGCGACACC
TCCAGAGGACCTCGTCGCTTTAATGGCAACGGACAGTCACTAGAGCGGAACAGTACGTCA
CGTGTTGCTTACAGCGCTGATGGGATGAGTGGTGGGCAATCGGACATCTCCAATTATGAT
TTACGCCACTTGCCGTATCACCAAGCGCAAAGGTCGTCACGTGACACAAGCGGCAGCTCC
CTTCTTCACGACGAAATCGCCTACACCAATGAAATGTACCAACGATGTGGTGCAATGCCA
AGAAACAGATACAGTGACGCTGGTCAGCTTTCGCCCCCAGCTTCCATCCCGACCTCAGCA
GAACGTGACCGCTTCATGGACCGATGTAGTGTCGATATGCTTCTGTGCGACAACATGCAA
CAGTCAACCCCAAATTGCCAGCACTCGATGGACTGGGACACGTGTGTACGTTGCATAAAA
GAACGGAGTGGAGCACCTGTTCCGTCAGGGAGATATTGTGATATACTTCGGCATGCTGGG
GAAATAAAAAACCCTGCAGTTCAACGCTACCACACCTTATCCCTTAACCCAAAACGGCAA
GATCCACGAGAGCACCCACTGTACCCTCCCGTGCACGACAACATTCCGACGCAAAACTCC
TCCGCGATCGACAACCCACTGCAGCAAGACCAATTTCTTAACCCTACCAACTGTCAGACA
CTTCCATCGATGCTTCGTTCATACTCTTCCTCTTCGTTTCTCAACTCAAAACGGCGATAT
TTCTTTGATGATCGCTGTTACCAGCTTCAGCCTCTTCTGTCGCCGGAGCTGAGTTCCGAG
GCTAAATACGAGAGCTCCCGCGACGCTTTGTATGCAGTTAACGTTCACGATGCGCCAAAG
CGGTTGTCGCCAGATTTGCCAAATGAGAGCGGTTTGTACGTTTTGGATGTTGAACATTGT
GCCGAGAACGGGTGCGAAGCCCGCGGGGGCTTGGGGGCCAGCACTCCACCGTATCCAGTT
CAAAACGGCATTCCATGCGTCAGAAACAGCTGGATATCCTCTTCTTCGTCGACATCTGAT
TATGGCTCGCAGAAATCCGGTACCCGGGAAAAACAG
| Gene3D |
Ig-like_fold (IPR013783) - T[39-107] 6.7E-6 - T[108-199] 5.5E-14 - T[201-303] 3.5E-14 - T[310-420] 1.7E-19 - T[421-532] 2.2E-14 - T[537-653] 3.5E-9 - T[655-748] 3.7E-14 - T[753-850] 3.7E-6 - T[851-965] 2.9E-16 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[41-80] 6.923 - T[103-192] 8.248 - T[196-296] 10.045 - T[301-409] 11.297 - T[416-518] 11.715 - T[650-740] 11.533 - T[749-855] 7.195 |
| SMART |
Ig_sub (IPR003599) - T[52-194] 11.0 - T[205-298] 0.29 - T[315-413] 19.0 - T[423-527] 0.11 - T[573-647] 0.22 - T[656-742] 1.5E-10 |
| SMART |
Ig_sub2 (IPR003598) - T[58-128] 4.0 - T[211-285] 0.7 - T[321-400] 0.65 - T[429-514] 0.88 - T[662-730] 3.4E-5 - T[763-846] 1.9 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[99-197] 6.49E-12 - T[201-301] 6.47E-12 - T[319-416] 6.55E-13 - T[416-530] 1.78E-12 - T[541-652] 2.98E-9 - T[643-742] 9.91E-16 - T[764-863] 6.25E-6 |
| Pfam |
CD80_C2-set (IPR013162) - T[117-183] 2.8E-4 - T[213-283] 3.4E-6 - T[319-401] 8.6E-9 - T[427-513] 6.5E-8 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[848-961] 3.97E-16 |
| CDD |
FN3_dom (IPR003961) - T[860-961] 1.03099E-10 |
| SMART |
FN3_dom (IPR003961) - T[860-951] 4.1E-9 |
| Pfam |
FN3_dom (IPR003961) - T[861-949] 3.8E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[862-964] 15.361 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DSCL1_HUMAN | 22.732 % | 114 | 2.71E-25 |
| DSCAM_HUMAN | 22.222 % | 113 | 4.67E-25 |
| NPHN_HUMAN | 28.571 % | 300 | 8.09E-84 |