- Transcript 'Phfumi.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S9036.g08244.01.t
Possible name(s)
HNF4A; HNF4G; RXRA
Gene model
Location
S9036 [28 / 3,857]
Amino acid sequence
Length: 313
>Phfumi.CG.MTP2014.S9036.g08244.01.p
DVIVMQTSAAVGGEPVDITIDNKKIASVNDVCDSMRQQLLVLVEWAKYIPAFSELPLDDQ
VALLRAHAGENLLMGVAKRSLPYQDILLLGNDFIIPRHCPEVEINRVAVRVLDELVRPLN
ELALDDTEFACLKAIVFFHPDARGLSNSAKIKTMRSQVMCNLEDYINDRQYDSRGRFGEI
LLLLPTLQSITWQMIEQIQFVRLFGVAHVDNLLQEMLLGSDNQTNMIPTTLPISSPAMPT
SPAHLHVSGPNGAGAGQSGVMGLGAQHHDIKPCLISPGGSPTMPQSAMLLRDVPIGMDID
GSIIGIQPKSEIA
Nucleotide sequence
Length: 942
>Phfumi.CG.MTP2014.S9036.g08244.01.t
GATGTCATTGTGATGCAGACATCTGCAGCAGTGGGGGGAGAACCGGTTGACATCACCATC
GACAACAAGAAAATCGCCTCGGTCAATGACGTATGCGACTCGATGCGTCAGCAACTGCTG
GTTCTGGTTGAGTGGGCAAAGTACATTCCCGCCTTTTCCGAGTTGCCCCTTGACGACCAG
GTGGCGCTGCTGCGTGCGCACGCGGGGGAGAATCTTCTCATGGGGGTCGCCAAACGGTCG
CTGCCCTATCAAGACATACTGTTGCTGGGCAACGACTTTATAATTCCAAGACACTGTCCC
GAAGTTGAAATTAATCGAGTCGCAGTACGAGTACTCGACGAACTCGTTCGGCCGCTCAAT
GAACTCGCACTCGACGACACAGAGTTTGCTTGTCTCAAGGCAATCGTCTTCTTTCATCCA
GATGCTCGTGGTTTGAGCAACTCGGCCAAGATCAAAACCATGCGTTCACAAGTCATGTGC
AATCTGGAAGATTACATCAACGACAGACAATACGACTCAAGGGGAAGGTTCGGTGAAATT
CTCCTTCTACTCCCGACCCTTCAGAGCATCACGTGGCAGATGATCGAGCAAATTCAATTC
GTCCGTTTGTTTGGAGTCGCCCATGTTGACAACCTGCTGCAAGAAATGCTGTTAGGAAGC
GACAACCAAACCAACATGATTCCCACCACGCTGCCCATATCGAGCCCTGCAATGCCTACC
AGCCCGGCCCACCTTCACGTTAGTGGGCCCAACGGTGCCGGGGCGGGACAGAGCGGCGTC
ATGGGCCTCGGGGCGCAACACCACGACATAAAACCGTGCCTGATAAGCCCCGGTGGGTCA
CCGACCATGCCCCAGTCGGCCATGCTGTTGCGAGATGTTCCTATAGGGATGGACATTGAT
GGATCCATCATTGGCATTCAGCCAAAGTCCGAGATTGCCTAA
| ProSiteProfiles |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[1-220] 54.489 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[17-218] 2.49E-62 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[24-204] 5.9E-40 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[33-191] 3.9E-48 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[34-55] 1.3E-22 - T[55-71] 1.3E-22 - T[122-137] 1.3E-22 - T[179-196] 1.3E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RXRA_HUMAN | 41.885 % | 157 | 1.23E-44 |
| HNF4A_HUMAN | 70 % | 317 | 4.6E-106 |
| HNF4G_HUMAN | 72.603 % | 318 | 1.57E-107 |