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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R58....' > 
  2. Transcript 'Haaura.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C14.115.v1...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S9...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S9275.g08319.01.t

Possible name(s)

SMC1A; SMC1B; SMC4

Gene model

Phfumi.CG.MTP2014.S9275.g08319

Location

S9275 [871 / 4,847]

Sequences

Amino acid sequence

Length: 762

>Phfumi.CG.MTP2014.S9275.g08319.01.p
KGEVEQIALMKPKAVNEHGDGMLEFLEDIIGSSRYKDAIEKLSKEIEQLDEDRKDRLSRV
KVVEKDKEQLEPLRNEALEFLRKQNEVSRLNNKLLQLYILAVTKEAETFKEKLADIQEER
KGVDEKLAEFQNKKKEAVKHCTALAKSLEDANAKHLEKKEKMRELEKRNVTVFEDRKHRK
AKLKELMKKIEKETKKLDDLMKRPDDIEREIEDLTEDRSDMVKRKKETEASKQKVMESLQ
QDTKNLQEKKEELENILLTKMKYVNERKQLWEVSDEELQLFVTNVNKAQTALDQCKKKIN
DSSQSKKSSCEEVKLVQKDVPALEKRIKENTAKLASLRKQEAELEAKVDDEESVLAEAKH
SAHSNRSKGAVVKFLLQLKKSGKIPGIYGRLGDLGVIDEKYDIAISSCCFALENILVDNI
ETAQNCVKALKTNQVGQATFIALDKMSKYQQAVRENSSSPLPRLIDLVKLKEEKFRVAFY
HALRDTLVADDISTASKVAYSKTRRWRVVTVKGEVIDTSGTMSGGGNKVIKGRMGSNYAS
EEIDPTEIDKLQRQICEKKDMLKKIKASIVTCEEELSLDENKLNSLKSNMKMLEHKIKSD
EKRQKDLQQQLPDLEDELNRAQPDKEQLLKLKSKSASLKKDYDKVAKDAQDVEGKKDKIH
EEICEANNKRMKPIQDRLNNLTRDIDETSKKLTKLKVALTTSKRNQEKSKKTLESLECEI
TENKTSIENLEQQWKQLEVDGAKVLEEVHVSDTENKKLSEEL

Nucleotide sequence

Length: 2,286

>Phfumi.CG.MTP2014.S9275.g08319.01.t
AAGGGTGAAGTTGAACAAATAGCACTGATGAAGCCGAAAGCCGTAAACGAACACGGCGAT
GGAATGCTGGAGTTTTTGGAAGACATCATCGGATCCTCTCGCTACAAAGATGCCATTGAA
AAACTTAGCAAGGAAATTGAACAACTGGATGAAGACAGAAAAGACAGATTGTCCAGAGTC
AAAGTTGTTGAGAAAGATAAAGAACAACTTGAACCTTTGCGAAACGAAGCTTTAGAGTTT
TTGAGAAAGCAAAATGAAGTTTCTCGACTTAACAACAAACTGCTACAATTGTATATACTT
GCTGTGACTAAAGAGGCTGAAACATTCAAGGAAAAGTTGGCAGACATTCAAGAGGAAAGA
AAAGGTGTTGATGAAAAATTAGCGGAATTTCAAAACAAGAAAAAGGAAGCTGTTAAACAT
TGTACTGCTCTTGCCAAATCTTTGGAGGACGCAAATGCAAAACATTTGGAAAAAAAGGAG
AAGATGAGAGAACTTGAAAAGCGAAATGTAACTGTGTTTGAGGATAGAAAACATAGAAAA
GCAAAACTCAAGGAACTAATGAAAAAAATTGAAAAGGAAACTAAGAAATTGGATGACTTA
ATGAAACGTCCTGATGATATCGAACGAGAAATTGAAGATCTTACAGAGGATCGATCTGAC
ATGGTAAAAAGAAAAAAAGAAACTGAAGCTTCAAAACAAAAAGTGATGGAAAGTTTGCAA
CAAGATACAAAGAACCTGCAAGAAAAAAAGGAGGAGCTGGAAAACATATTGTTGACCAAA
ATGAAATACGTCAACGAAAGGAAACAACTATGGGAAGTAAGTGATGAGGAATTGCAACTT
TTTGTTACAAATGTGAATAAAGCTCAAACCGCTTTGGATCAATGCAAGAAAAAGATCAAT
GACTCATCACAGTCAAAAAAATCATCTTGCGAGGAAGTCAAGTTAGTACAGAAAGATGTA
CCAGCTCTAGAAAAAAGGATTAAAGAGAACACTGCCAAGCTTGCTTCACTAAGAAAACAA
GAAGCCGAACTGGAAGCTAAAGTGGATGATGAAGAATCTGTATTAGCTGAAGCAAAACAC
AGTGCTCATTCCAATCGATCCAAGGGTGCCGTTGTCAAATTTCTTTTACAGCTCAAGAAA
AGTGGAAAGATACCTGGAATATATGGACGCTTGGGAGATCTTGGTGTGATTGATGAAAAA
TATGACATTGCAATTTCATCTTGTTGTTTTGCCTTGGAAAACATTCTAGTTGACAACATA
GAAACTGCTCAAAATTGTGTAAAAGCTCTGAAAACTAATCAAGTCGGCCAGGCTACATTT
ATAGCTTTGGACAAGATGTCAAAATATCAACAAGCTGTAAGAGAGAATTCATCTTCCCCA
TTGCCCAGATTAATTGATTTGGTAAAGCTAAAGGAAGAGAAGTTCCGAGTTGCTTTTTAT
CATGCGTTAAGGGACACTTTAGTTGCTGATGACATTAGCACTGCAAGTAAAGTGGCTTAC
AGTAAAACCAGGCGTTGGAGGGTTGTCACTGTCAAGGGAGAGGTGATCGACACATCTGGA
ACGATGTCTGGCGGAGGAAACAAAGTAATAAAAGGTCGGATGGGTTCAAATTATGCATCT
GAAGAAATCGACCCCACAGAAATTGACAAACTGCAACGTCAAATCTGTGAAAAGAAGGAT
ATGTTGAAAAAGATCAAAGCAAGTATTGTGACATGCGAGGAGGAGTTGTCACTTGATGAG
AATAAACTTAATTCCCTGAAATCCAACATGAAAATGCTGGAACACAAAATTAAGAGTGAC
GAAAAAAGGCAAAAAGATTTGCAACAACAATTACCGGATTTGGAGGATGAGTTAAATCGG
GCACAGCCTGATAAGGAACAACTTTTAAAACTCAAGTCAAAATCTGCATCTTTGAAAAAG
GACTATGATAAAGTTGCTAAAGATGCTCAAGATGTCGAAGGGAAAAAAGACAAAATTCAT
GAGGAGATTTGTGAAGCAAACAATAAACGCATGAAACCAATTCAAGATAGATTGAACAAC
TTAACTCGTGATATTGATGAAACTTCTAAAAAGTTAACCAAGCTAAAGGTTGCGTTAACA
ACATCGAAACGCAATCAAGAAAAGTCAAAGAAAACCCTGGAAAGCCTTGAATGTGAAATT
ACTGAAAACAAAACGAGCATTGAAAATTTAGAACAACAATGGAAACAATTGGAGGTTGAT
GGAGCCAAGGTTTTGGAGGAAGTTCATGTTTCTGATACTGAAAATAAAAAGTTAAGTGAA
GAACTT

InterProScan

SUPERFAMILY
SMC_hinge_sf (IPR036277) - T[345-554] 1.44E-45
SMART
SMC_hinge (IPR010935) - T[385-499] 1.8E-29
Pfam
SMC_hinge (IPR010935) - T[385-498] 8.8E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMC4_HUMAN 38.492 % 448 1.14E-141