Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 654

>Phfumi.CG.MTP2014.S9920.g08486.01.p
SPSDTKSSAVHRLIAESPAPEFLTPVSDATSSHNLKRSSKLGEPILMKKPRLSSSFNEDV
IDLDTTPSPSKTVPSSDQENILVVNDSPATNRMRKHCKEMGINFAATTSMLKTKPALTRI
GNSNNNFTSLQRNKLIKNKTAASSEIESADVIRLIEQYFKESNLMRTLATLQEESTVSLN
TVDSIDGFVSDINNGHWDTVLQAIQSLKLPDKALVDLYEQIVLELIELRELGAARSLLRQ
TDPMTALKHAQPDRYLHLENLLARSYFDPREAYPDGSTKEKRRAAIAHSLSKEVSVVPPS
RLMALLGQSLKWQQHQGLLPPGTTIDLFRGKAATIREEEDERYPTQISKTIKFGQKSHVE
CARFSPDGQYLVTGSVDGFIEVWNFVTGKIRKDLSFQAQDKFMMMDDAVLCLGFSRDSEM
LASGDQEGKIKVWKTITGQCLRRFEKAHSKGVTTVSFSRDGSQVLSASFDQTIRIHGLKS
GKTLKEMRGHSSFVNEAVFVPDGHHIISASSDGNVKVWNLKSTECVNTFKSLGAGQQDVT
VNSVHLLAKNQEHFVVCNRSNFVAIMNMQGQIVRTFSSGKREGGDFVCATVSPRGDWIYC
VGEDKVLYCFSTTTGKLERTLTVHDGDVIGISHHPHNNLIATYSEDGLLRLWKP

Nucleotide sequence

Length: 1,965

>Phfumi.CG.MTP2014.S9920.g08486.01.t
TCACCTTCAGACACTAAATCATCAGCAGTGCATAGATTAATTGCTGAAAGTCCAGCTCCT
GAGTTTTTGACCCCAGTTTCTGATGCTACTAGTTCTCATAATCTGAAACGCAGCTCAAAA
CTAGGTGAACCAATTTTAATGAAAAAACCTAGACTTAGTTCATCATTTAATGAGGATGTG
ATCGATCTAGACACAACACCCAGTCCGTCTAAGACTGTTCCATCATCAGATCAAGAAAAT
ATATTGGTGGTAAATGATAGCCCTGCAACGAACCGGATGAGAAAGCATTGCAAGGAAATG
GGAATCAATTTCGCAGCAACTACCTCGATGTTGAAGACGAAACCTGCACTTACCAGAATT
GGAAATAGCAACAACAATTTTACTTCCCTGCAACGGAACAAACTGATCAAAAACAAAACA
GCAGCTAGTTCGGAAATAGAATCAGCAGATGTCATTCGGTTAATTGAGCAGTATTTTAAG
GAAAGTAATCTAATGCGAACACTGGCAACTTTACAGGAAGAGTCTACTGTTTCTCTTAAC
ACCGTTGACAGCATCGATGGCTTTGTATCGGATATTAACAACGGCCATTGGGACACAGTC
CTTCAGGCTATTCAGTCTTTGAAGCTACCAGACAAGGCACTTGTGGACTTATATGAGCAG
ATAGTCCTAGAACTAATTGAGCTCCGAGAACTGGGAGCTGCAAGGTCCTTGTTGCGGCAA
ACTGACCCAATGACAGCATTAAAACATGCACAACCAGATCGATACCTCCATTTGGAAAAT
CTTCTTGCAAGATCCTACTTTGATCCCAGGGAAGCCTACCCAGACGGCTCTACAAAGGAG
AAGCGGAGGGCTGCAATTGCCCATTCACTTTCAAAAGAAGTCAGTGTGGTACCACCGTCT
CGTCTAATGGCCCTGCTGGGTCAATCATTGAAATGGCAGCAGCACCAAGGCTTGCTTCCT
CCAGGCACCACCATCGATTTGTTCCGTGGAAAAGCAGCCACTATTCGTGAAGAAGAGGAT
GAAAGATATCCGACGCAAATCAGCAAAACTATTAAATTCGGACAAAAATCGCATGTAGAG
TGTGCAAGGTTCTCCCCAGACGGCCAGTACCTCGTTACTGGAAGCGTTGATGGTTTTATT
GAGGTGTGGAATTTTGTCACTGGAAAAATCCGCAAGGATTTAAGTTTTCAAGCACAGGAC
AAGTTTATGATGATGGACGATGCTGTGCTATGTCTTGGATTTAGCCGTGACAGTGAAATG
CTTGCAAGTGGTGACCAAGAGGGAAAAATAAAGGTTTGGAAAACCATCACAGGTCAATGC
CTTCGTCGCTTCGAAAAAGCCCACTCTAAAGGTGTCACCACAGTTTCATTTTCAAGAGAT
GGAAGCCAGGTGTTAAGTGCCTCCTTTGATCAAACCATCCGAATTCATGGCTTAAAATCA
GGCAAAACCCTCAAGGAAATGAGAGGTCACTCATCATTTGTAAATGAAGCTGTTTTTGTT
CCGGATGGCCACCACATTATTAGTGCTTCATCAGATGGCAATGTTAAGGTTTGGAATCTC
AAGTCCACTGAATGTGTGAACACCTTCAAATCACTTGGCGCTGGTCAACAGGATGTAACA
GTGAACAGCGTTCATCTTCTTGCCAAAAACCAGGAGCATTTTGTGGTTTGCAACCGTTCA
AACTTTGTGGCCATTATGAATATGCAGGGACAAATTGTGAGAACATTTAGTTCAGGAAAG
CGTGAAGGTGGTGACTTCGTTTGTGCTACTGTCTCACCAAGAGGAGATTGGATTTATTGC
GTTGGAGAGGACAAGGTGCTGTACTGTTTTTCGACGACCACCGGTAAACTTGAAAGAACC
CTTACAGTTCATGATGGCGACGTCATCGGCATATCTCACCACCCTCACAACAACTTGATT
GCCACTTACTCCGAGGACGGCCTTCTTAGGCTTTGGAAGCCTTGA

InterProScan

ProSiteProfiles	LisH (IPR006594) - T[147-179] 9.971
SMART	LisH (IPR006594) - T[147-179] 1.1E-4
SMART	CTLH_C (IPR006595) - T[181-233] 6.0E-8
ProSiteProfiles	CTLH_C (IPR006595) - T[181-233] 11.098
Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[338-654] 5.9E-71
SMART	WD40_repeat (IPR001680) - T[344-384] 5.7E-7 - T[395-434] 0.0032 - T[437-477] 2.0E-7 - T[480-519] 9.6E-9 - T[522-567] 160.0 - T[569-611] 3.4 - T[614-653] 6.6E-6
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[350-653] 2.45E-70
ProSiteProfiles	WD40_repeat (IPR001680) - T[352-393] 13.048 - T[402-443] 10.843 - T[445-486] 11.478 - T[487-528] 16.724 - T[621-654] 12.012
ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[352-654] 41.657
Pfam	WD40_repeat (IPR001680) - T[354-384] 2.0E-6 - T[409-434] 0.034 - T[438-475] 2.7E-5 - T[481-519] 4.1E-6 - T[615-653] 0.0026
PRINTS	G-protein_beta_WD-40_rep (IPR020472) - T[371-385] 9.9E-5 - T[421-435] 9.9E-5 - T[506-520] 9.9E-5
ProSitePatterns	WD40_repeat_CS (IPR019775) - T[371-385] . - T[506-520] .