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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R489...' > 
  2. Transcript 'KH2012:KH.C4.356.v1....' > 
  3. Clone 'cien97187' > 
  4. Transcript 'KH2012:KH.C3.246.v1....' > 
  5. Transcript 'Mooccu.CG.ELv1_2.S12...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S122044.g03654.02.t

Possible name(s)

LIN7C; MPDZ; PATJ

Gene model

Mooccu.CG.ELv1_2.S122044.g03654

Location

S122044 [193 / 10,952]

Sequences

Amino acid sequence

Length: 609

>Mooccu.CG.ELv1_2.S122044.g03654.02.p
MTTTDMQSESSSSSSSDTEVVESHQEEEEDGEEHPISYELPLSNDTEDRIRRDWSYRVGS
EYEIVVAQIHKFSESSGLGISLEGTVDMSDHPHHYVRSILHDGPVGINGTLRPGDELLEV
NGHPLLGLHHFEVVVVMKELPIGVVMVCARPLDALFKAQARDSVVLEEFDGEFHRVPESD
IAEETEGQTSQTQTSSSEDEDDAPTATDDHSTDDEFPATSEDVHETSVKETSMSEAAITS
MSEAVTSEASNSSTEEVEDEDTETEEIAKDAAWGDEIHYVELNKTEKGLGFSILDFQDPV
YPDKTALLIRSLVQGGESDVSGQINPGDKLVSVNQVSLEGSNLETAVTVLKALPRGIVVL
GLKKPKSMYQVEAAHKIEVQEQESSTSSEEEVNESHHIHEPSPAPSPHVSRTFNVEPTVS
SSSSSSSEEDELGDSSTTVPSVSSVIAAFNKGQQPATPQLTRQSPTEELSTTGSVSVSEA
STSDVSSHPPVQDTQMEPRIEPSSTTIDRKMEVKHIPMAGMTAIAITSSNIRPQPRQPSP
LPQQQQRVPSPTVTAAPPTMVPTRQSLSPRQKNSAPSWQDSGLIQSKPFPEEGYERIVHI
EKGNTSLV*

Nucleotide sequence

Length: 2,254

>Mooccu.CG.ELv1_2.S122044.g03654.02.t
AGATGATGAAACTGATGATGAATCAACCACATCGAAGATTTATATCAAGAGTGTTCTTCC
CGGATCCGCAGCAAGTAAAGATGGAAGAATACGTCCAAGAGATCAAATTGTTGCTGTGAT
GGCCGGTCACTTTTGGATCCACATATAACAAGTGATGATGCGGTCAATGTCCTTCGATCA
ACTGGTCAAGTTGTTAAACTGACCATCTCAAGACCAAGAAAACCACAGGACATGACCACT
ACGGACATGCAGTCGGAGTCTTCTTCTAGCAGCAGTTCGGACACAGAAGTTGTTGAATCT
CACCAAGAGGAGGAGGAAGATGGTGAAGAACATCCAATAAGTTATGAGCTTCCTCTAAGT
AACGATACGGAAGACCGAATCAGACGTGATTGGTCGTATCGCGTTGGTTCCGAGTATGAG
ATCGTGGTTGCACAAATCCATAAATTCAGCGAATCGAGTGGACTTGGTATAAGTTTGGAA
GGAACAGTGGACATGAGTGACCATCCACATCATTATGTCCGTTCGATTCTTCATGATGGA
CCTGTTGGAATCAACGGTACTTTACGGCCAGGAGATGAATTGCTTGAAGTCAACGGTCAT
CCTTTGTTGGGATTGCATCATTTTGAGGTTGTTGTCGTGATGAAGGAACTTCCTATCGGC
GTGGTGATGGTTTGTGCACGCCCACTCGACGCCCTCTTCAAAGCGCAGGCTCGTGACTCT
GTCGTACTCGAAGAATTTGACGGGGAGTTCCACAGAGTACCAGAAAGTGACATTGCGGAG
GAAACTGAAGGTCAAACCTCGCAAACGCAAACATCATCAAGTGAAGATGAAGATGATGCC
CCAACTGCTACGGATGACCATAGCACGGATGACGAGTTTCCTGCAACTTCCGAGGATGTT
CACGAGACAAGCGTGAAGGAGACATCGATGTCGGAAGCTGCTATAACATCCATGTCGGAA
GCTGTCACCTCCGAAGCATCCAATTCAAGCACAGAAGAAGTAGAGGATGAAGACACAGAG
ACGGAGGAAATTGCTAAAGACGCTGCGTGGGGTGATGAAATACATTACGTGGAACTCAAC
AAAACAGAAAAAGGTCTTGGATTCAGTATATTGGATTTTCAGGACCCAGTGTACCCGGAC
AAAACTGCCCTGTTAATAAGGTCATTAGTCCAAGGTGGCGAATCAGATGTGTCGGGGCAG
ATTAATCCTGGCGATAAATTGGTGTCTGTCAACCAAGTATCGTTGGAAGGATCAAATCTC
GAAACTGCTGTTACGGTTTTGAAGGCTTTACCGAGAGGAATCGTCGTGTTGGGTTTAAAG
AAACCAAAATCAATGTATCAAGTCGAAGCTGCTCATAAAATTGAAGTTCAAGAACAAGAG
TCTTCAACTTCGTCTGAAGAAGAAGTGAATGAAAGTCATCACATTCATGAACCTTCTCCT
GCTCCGTCTCCACATGTTTCACGGACATTCAACGTGGAACCGACAGTATCCTCCTCTTCA
TCATCATCAAGTGAAGAAGATGAGCTTGGCGATAGCAGCACAACTGTACCATCAGTTTCA
TCGGTCATTGCTGCTTTTAATAAAGGTCAACAACCGGCCACTCCTCAACTGACCCGACAA
TCACCAACTGAAGAACTCTCTACTACCGGTTCTGTATCAGTATCAGAAGCCTCAACCTCT
GATGTGAGTTCTCATCCTCCTGTTCAAGACACACAAATGGAACCAAGGATTGAACCTTCA
TCAACAACCATTGACAGGAAAATGGAGGTGAAACACATCCCGATGGCCGGTATGACGGCG
ATCGCTATCACGTCATCGAACATACGTCCGCAACCACGACAACCATCCCCGTTACCGCAG
CAACAACAACGTGTACCATCACCAACGGTTACTGCAGCACCGCCTACCATGGTGCCGACC
AGGCAATCTCTTTCACCTCGACAGAAGAACTCTGCTCCATCATGGCAAGATTCTGGCTTG
ATTCAATCGAAACCTTTCCCTGAGGAAGGCTATGAGAGAATCGTCCACATTGAGAAGGGA
AATACAAGTCTGGTGTGACCGTCAGTCCGGACAAAGATGGTGATGGTTTGGTCATCCGCT
CGATATTAACTGGAGGTGCGATATCACGTACGGGAGAACCACAAGTAGGCGATATAATTC
GCCGAGTCAACAGTGACTCAGCAGTTGGTCTCGGAGCCATGCAAGCACGATCACTCATCC
GGAACCATTCAATGCATAGCACCAAAGTGAAGTA

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[137-230] 3.29E-20 - T[349-443] 5.52E-17
ProSiteProfiles
PDZ (IPR001478) - T[143-229] 15.199 - T[356-442] 16.024
Pfam
PDZ (IPR001478) - T[148-217] 4.7E-8 - T[358-431] 2.9E-8
SMART
PDZ (IPR001478) - T[153-229] 1.8E-14 - T[364-443] 3.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MPDZ_HUMAN 41.346 % 194 1.41E-52
INADL_HUMAN 40.244 % 107 4.63E-24