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TRANSCRIPT CARD

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  1. Clone 'ma164d01'
  2. Clone 'ma128m03'
  3. Clone 'cidg832j23'
  4. Clone 'cima876482'
  5. Transcript 'Mooccu.CG.ELv1_2.S23...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S235076.g08681.01.t

Possible name(s)

CCNA1; CCNA2; CCNB1

Location

S235076 [11,162 / 12,936]

Sequences

Amino acid sequence

Length: 406

>Mooccu.CG.ELv1_2.S235076.g08681.01.p
MSLPMNENINTMDGHGHSQIQHPMKSGKTQRSTRPVLGVLNPNVNSGRVQPFRAAKQNAT
TEGYFSESMHPPQPFKIFEDGQQKQKTENENKMLQSLAALPSRVPLSNISHHETPTDSPM
VLDVSGVVEDSVVDIDHLSSLFHVSEYASEIFEHLREAEIRNRPKAKYMRKQQDITSGMR
AILVDWLVEVSEEYKLHTETTHLAVNYIDRFLSQMAVLRGKLQLVGTAAMFLAAKYEEIY
PPDVGEFVYITDDTYTKKQVLRMEHLVLKVLAFDVAVVTSHQFLPRFLKAAKADKKVEML
AMFLCELALVDYDCIGYIPSMVAASAVCLASYTINGKMWDKTMEHYMQYKLTDLSECITR
LNNLFVASESSPQQAVRDKYKDAKYENVSSLTPTESLPFDNMDEN*

Nucleotide sequence

Length: 1,373

>Mooccu.CG.ELv1_2.S235076.g08681.01.t
TTTTATATAAATACTGCAAGACATCCTCAAATAACTGCAATTCACAATCTTGCTTGCTGC
AGTTTGGGTCACATTTGATAAACTGTTAACTGTGTCCAGCTGCCTCCTGAAATTAACAAA
ATGTCACTTCCAATGAATGAAAATATAAATACCATGGATGGTCATGGTCATTCCCAAATT
CAACATCCAATGAAATCTGGAAAAACTCAAAGATCGACTAGACCTGTTTTGGGAGTATTA
AATCCAAATGTTAACTCTGGGAGAGTTCAGCCTTTCCGCGCTGCAAAACAAAATGCAACA
ACAGAAGGTTATTTTTCCGAATCAATGCATCCGCCACAACCGTTTAAAATTTTTGAGGAT
GGACAACAAAAGCAAAAAACTGAAAATGAAAATAAAATGTTACAAAGTTTGGCGGCGTTA
CCCAGTAGAGTGCCGCTTAGCAACATAAGTCACCATGAAACGCCAACTGATTCTCCAATG
GTTCTGGATGTTTCGGGGGTCGTAGAAGACAGCGTTGTCGACATCGATCATCTATCCAGT
TTATTCCATGTTTCTGAATATGCAAGTGAAATTTTCGAGCATCTACGTGAAGCTGAAATT
CGAAATCGGCCCAAAGCCAAATATATGCGCAAGCAACAAGATATCACGTCCGGCATGCGT
GCAATATTAGTGGATTGGCTTGTAGAAGTCTCCGAAGAATATAAATTACACACAGAAACC
ACCCATTTAGCGGTTAATTATATTGATCGGTTTTTATCACAAATGGCAGTTTTAAGAGGA
AAACTTCAATTGGTTGGAACTGCTGCGATGTTCTTGGCTGCCAAATATGAAGAAATTTAT
CCTCCAGATGTTGGTGAATTCGTTTATATCACCGATGACACCTACACGAAAAAACAAGTT
TTACGAATGGAACATTTGGTTCTAAAAGTTCTTGCATTTGATGTTGCTGTGGTCACTTCA
CATCAATTCCTACCAAGATTTTTGAAAGCGGCGAAGGCAGATAAAAAAGTTGAAATGCTA
GCAATGTTCCTATGTGAACTTGCTCTTGTGGACTACGACTGCATCGGTTATATCCCTTCC
ATGGTTGCGGCTTCCGCCGTTTGTCTTGCAAGCTACACCATCAACGGCAAAATGTGGGAC
AAGACCATGGAACATTACATGCAGTACAAATTAACCGATCTATCCGAATGTATAACTAGA
TTAAATAACCTGTTTGTCGCAAGCGAATCAAGTCCTCAACAAGCAGTCCGAGATAAATAC
AAAGATGCTAAATATGAAAATGTATCGAGCTTAACGCCAACCGAAAGTCTACCTTTTGAT
AATATGGATGAAAATTGATGCAGAAAGGATGTAAAAAAAAATAATGACTTCAC

InterProScan

SUPERFAMILY
Cyclin-like_sf (IPR036915) - T[180-315] 2.33E-50 - T[319-437] 1.7E-38
Pfam
Cyclin_N (IPR006671) - T[190-315] 3.2E-47
CDD
Cyclin-like (IPR013763) - T[219-308] 7.87009E-26 - T[317-389] 1.10538E-16
SMART
Cyclin-like (IPR013763) - T[225-309] 3.0E-29 - T[322-403] 1.5E-19
Pfam
Cyclin_C-dom (IPR004367) - T[318-433] 3.6E-34
SMART
Cyclin_C-dom (IPR004367) - T[318-434] 3.8E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CCNB1_HUMAN 35.099 % 188 2.37E-55
CCNA1_HUMAN 55.282 % 315 4.19E-104
CCNA2_HUMAN 46.683 % 312 2.05E-103