- Transcript 'KH2012:KH.C1.263.v1....' >
- Transcript 'KH2012:KH.C7.105.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C3.99.v1.A...' >
- Transcript 'Mooccu.CG.ELv1_2.S28...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S284158.g11207.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
S284158 [867 / 2,586]
Amino acid sequence
Length: 229
>Mooccu.CG.ELv1_2.S284158.g11207.01.p
MSSFVGAIAIGDLVKSTLGPKGMDKILLSAGDGGRQAGITVTNDGATILKSIGIDNPAAK
VLINMSKVQDDEVGDGTTSVTILAAELLREAEKLIAQKLHPQTIISGWRRATEVARDALE
AAAMDNGKDEAKFYEDLMNISRTTLSSKLLTQHKDFFAKMAVDAVLRLKGSGNLEAIQII
KKLGATMTDSKLDEGFLLDKKIGVNQPKRMENAKILIANTAMDTDKIKV
Nucleotide sequence
Length: 760
>Mooccu.CG.ELv1_2.S284158.g11207.01.t
TAGAGTGCTGCATTAAATCCTGTCGCGATCTATAATCAAGGAGCCGATGAAGAAAAAGCG
GAAACCGCTCGAATGTCTTCATTTGTTGGTGCTATTGCAATCGGCGACCTTGTCAAAAGC
ACACTTGGTCCAAAAGGAATGGATAAAATATTGTTATCTGCGGGAGATGGAGGCAGACAG
GCTGGTATCACTGTGACAAATGATGGAGCTACAATTCTTAAATCAATTGGAATTGATAAC
CCCGCAGCAAAGGTTCTTATAAACATGTCCAAAGTACAAGACGACGAAGTTGGTGATGGA
ACAACATCTGTAACTATCCTTGCAGCTGAGCTCTTGAGGGAAGCAGAAAAACTAATTGCA
CAGAAACTTCATCCACAGACAATAATCTCCGGTTGGAGGCGAGCTACTGAGGTTGCAAGG
GATGCGCTTGAGGCAGCTGCAATGGATAACGGAAAAGATGAAGCCAAATTTTATGAGGAT
TTAATGAACATCTCTCGCACTACACTCAGTTCAAAACTTTTAACACAACACAAAGACTTC
TTTGCAAAGATGGCCGTTGATGCTGTGTTAAGACTGAAGGGAAGCGGTAATCTAGAAGCT
ATACAAATAATTAAAAAATTGGGTGCAACTATGACAGATTCAAAATTGGACGAAGGATTC
TTATTGGATAAAAAGATTGGAGTAAATCAACCAAAACGTATGGAGAATGCGAAAATTTTG
ATTGCGAATACTGCAATGGACACCGATAAAATAAAGGTAA
| PANTHER |
Chap_CCT_beta (IPR012716) - T[5-253] 3.1E-128 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[5-253] 3.1E-128 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[16-149] 2.49E-43 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[33-148] 1.4E-83 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[35-252] 5.5E-62 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[36-52] 7.5E-14 - T[93-112] 7.5E-14 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[39-51] . - T[65-81] . - T[93-101] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[149-217] 1.4E-83 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[158-217] 7.32E-12 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[213-252] 2.51E-5 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[218-253] 1.4E-83 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 39.831 % | 159 | 7.2E-46 |
| TCPH_HUMAN | 41.667 % | 157 | 5.41E-45 |
| TCPB_HUMAN | 78.166 % | 367 | 3.69E-126 |