Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S291234.g11669.01.t

Possible name(s)

RFC2; RFC4; RFC5

Gene model

Mooccu.CG.ELv1_2.S291234.g11669

Location

S291234 [1,505 / 4,210]

Sequences

Amino acid sequence

Length: 234

>Mooccu.CG.ELv1_2.S291234.g11669.01.p
MSFASTKTIFNRGFKLIILDEADAMTKDAQNALRRVMEKFTENTRFCLICNYLTKIIPAI
QSRCTRFRFGPLTTEQMVPRLQHVVNEEKLTIDDSGMQTIVKLARGDMRRALNVLQSTSM
AHDLVNEETVYQCTGQPNQKDIEHFIEVMLNRDFMNAYKDINTMKVDKGFALQDILTEVH
DFVHKIDFPTEIRILILDKMGIIEHSLASGTSEKLQTSALISAFQQAKNLVAK*

Nucleotide sequence

Length: 901

>Mooccu.CG.ELv1_2.S291234.g11669.01.t
TGACAGATTATGAGTTTTGCAAGTACGAAGACGATATTTAATCGTGGGTTTAAGTTGATT
ATCCTCGATGAAGCGGACGCAATGACAAAAGACGCACAAAATGCTCTTCGACGAGTCATG
GAAAAGTTTACAGAAAACACACGTTTCTGTCTCATCTGTAATTATCTTACAAAGATTATA
CCTGCCATTCAGTCCCGTTGTACACGATTTCGATTCGGTCCTTTGACAACAGAACAAATG
GTGCCACGTCTTCAACATGTTGTCAATGAGGAGAAATTAACCATCGATGATTCGGGGATG
CAAACGATTGTTAAATTAGCACGTGGGGACATGCGACGAGCTTTGAATGTTTTGCAAAGT
ACATCAATGGCGCATGATTTGGTAAATGAAGAAACTGTTTACCAGTGCACAGGACAACCG
AATCAAAAAGATATCGAACATTTTATTGAAGTGATGCTTAATCGAGATTTCATGAATGCA
TACAAAGATATCAATACAATGAAAGTTGATAAAGGTTTTGCGCTGCAAGATATTTTAACA
GAAGTTCACGATTTTGTACACAAAATAGACTTTCCAACAGAAATTCGTATTTTAATTCTG
GATAAAATGGGAATCATTGAACATAGTTTGGCATCTGGAACAAGTGAAAAACTTCAAACA
AGTGCTCTTATTTCTGCTTTTCAGCAAGCTAAAAATTTAGTTGCGAAATAATTGTTTATT
GATGCCATTTGTACAAAATTGGTTTCTTGTATTTTACTGCCCCTTCACCTCCATCATCTT
GTCCTGAATAATATCCAAATAATCCAATTATATAACACTCTACTGTTGCTCTGTGGGTCA
TGCCTACATGAGTGCGGTTACAGCACATCTGGTAAAATGGTATTTCAATACATAAAACCT
G

InterProScan

SUPERFAMILY	P-loop_NTPase (IPR027417) - T[2-124] 1.55E-33
SUPERFAMILY	DNA_pol3_clamp-load_cplx_C (IPR008921) - T[139-231] 7.23E-23
Pfam	Rep_factorC_C (IPR013748) - T[140-226] 7.4E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RFC2_HUMAN	34.667 %	139	8.7E-40
RFC4_HUMAN	33.953 %	135	5.11E-38
RFC5_HUMAN	65.801 %	331	1.09E-114