- Transcript 'Cisavi.CG.ENS81.R9.1...' >
- Clone 'cicl057p10' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S454...' >
- Transcript 'Mooccu.CG.ELv1_2.S39...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S394367.g17980.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S394367 [15,271 / 18,908]
Amino acid sequence
Length: 659
>Mooccu.CG.ELv1_2.S394367.g17980.01.p
MSCLADNKCLTSGCSHLCLPKPSGFTCDCETGFTLVNETHCSDEIKEFLIFTKKEEIRRI
SFDAADRTDTVLPLKKLQNTMAIDWDSKYPGHIYWTDLTNDTINKAQWDGSQQKTIISSS
LDSPTGIAVDWITGKLYWADDGMDRIEVALLDGSMRAVLVYKDLDHPRDIAVLPSKGMMF
WTDWGHKAKIERAGMDGSGRMEIITDHLSLPNGLAIDTELERVYWVDAGLGYISSCSLDG
GHRHAVIPSNLPYPFGITLHGDTLYWTDVVNETIFSANKFDGSNVRVVRDKLTDLMDIHY
YHRNRTQSYNPCQDKNGGCSHLCLLSPATVEHSFINPAQVAHSCHCPTGFALDNNKKTCN
TIMNKFLVIARRSDVRVISLDVSYAADVKLSLQANLANVIDIAVDPVDAMLYWSDIGTQQ
IMRSNLSDLRTSEVVLKAGINNVDGLTIDPNTRKIYWTDAERKIVAVSELNGKKWKILIA
DNLDSPRAIITHYESGYLYWTDWGRTPNIARSGMDGSNPTQIITENLMWPNGVTIDTVGN
RLIWGDAHTELIESSTLDGFDRRTLKESVRHAYSLTAMEGFLYWTDWQTRNVERLNLKNT
SQIVSMRKNLINLMGIKAVSLDQDGHKRSNYCGTNNGGCTHLCLRSPVTSSGYQCACPT
Nucleotide sequence
Length: 2,322
>Mooccu.CG.ELv1_2.S394367.g17980.01.t
CTTTTTGAAATGCATTTTATGATTTTAACATTAACCCCACACGGAGAAGTATTTAACCTT
TATGGCGTTTGGACTTAGCTTTTAATCGTAGCACTTACAGTGGTTTATTTAACGCAGGTC
TTCGTCATCCATTTTCCATTACAATCTTCGAAGATAAACTTTATTGGACCGACTGGAAGA
CAAAAAGTATTAACAGCGTCAACAAATTTACTGGCACTGACGTTCGGACGGTCAAAAACC
ATTTGCACTTTCCTATGGGGATTCAAACATATCACCCACAGCGACAACCATTTGGTACTC
CCATATACAAGCTGTGATTGTTGTAAAGTTTACTTAACTTGGATTATGTCTTGTTTAGCC
GATAACAAGTGTTTAACCAGTGGCTGTAGTCATCTTTGCCTGCCAAAGCCTTCAGGATTC
ACATGTGATTGCGAAACCGGTTTCACTTTGGTCAACGAGACACACTGTTCAGACGAAATC
AAAGAATTCCTGATTTTCACAAAGAAAGAAGAAATAAGACGGATTTCCTTCGACGCCGCA
GACAGAACAGACACAGTTCTGCCTCTGAAGAAACTGCAGAACACCATGGCGATTGATTGG
GACAGTAAATACCCTGGACATATATACTGGACAGACCTGACTAACGACACTATAAACAAA
GCTCAATGGGATGGAAGCCAACAAAAGACAATCATTAGCTCAAGCTTAGACTCACCAACT
GGTATAGCAGTGGATTGGATAACTGGCAAATTGTATTGGGCTGATGACGGGATGGACAGA
ATAGAAGTAGCACTTTTGGACGGGTCAATGCGTGCGGTACTCGTCTATAAAGACCTTGAC
CACCCACGTGACATTGCAGTGCTACCAAGCAAAGGGATGATGTTTTGGACGGATTGGGGT
CATAAAGCAAAGATTGAAAGAGCGGGAATGGACGGGTCAGGTCGAATGGAAATAATTACT
GATCATTTATCGCTACCAAATGGTCTGGCCATTGATACTGAATTAGAAAGGGTTTACTGG
GTGGACGCAGGGTTGGGGTACATTTCATCGTGCAGTTTGGACGGCGGTCATCGTCATGCG
GTCATTCCAAGTAACCTTCCTTATCCGTTTGGAATTACCCTTCATGGAGATACGCTATAT
TGGACAGATGTGGTCAATGAAACGATTTTCTCTGCAAATAAATTTGATGGTTCAAATGTT
CGCGTTGTTCGCGACAAATTGACTGATTTAATGGACATTCATTATTACCACCGAAACCGC
ACACAATCATACAATCCATGTCAGGACAAAAACGGTGGATGTTCACATCTGTGTCTTCTC
TCACCTGCCACAGTGGAACATAGCTTCATAAACCCTGCCCAGGTTGCTCATAGTTGCCAC
TGTCCGACTGGTTTTGCGTTGGACAACAACAAAAAGACGTGTAACACAATCATGAACAAG
TTTTTGGTAATCGCTCGAAGGTCTGATGTCCGTGTAATATCACTGGATGTCTCTTACGCT
GCCGATGTGAAATTGTCTCTTCAAGCAAACCTGGCAAATGTGATTGATATCGCTGTTGAT
CCTGTTGACGCGATGCTTTATTGGTCCGACATTGGGACGCAACAAATTATGCGTAGCAAC
CTATCTGACCTTCGAACTTCTGAGGTGGTACTAAAAGCCGGAATAAATAACGTAGACGGA
TTAACGATTGACCCGAATACACGGAAGATTTACTGGACGGACGCAGAAAGAAAAATCGTA
GCAGTCTCGGAATTGAACGGGAAAAAATGGAAAATTTTAATAGCCGACAATCTTGATTCA
CCAAGAGCTATAATCACACATTACGAATCTGGGTACCTTTACTGGACCGACTGGGGTCGA
ACCCCAAACATTGCAAGATCTGGAATGGATGGGTCAAATCCTACCCAGATTATTACTGAG
AATTTGATGTGGCCGAATGGCGTTACCATAGACACTGTTGGCAACAGATTGATATGGGGT
GACGCTCACACAGAGCTCATTGAATCATCGACACTCGACGGATTTGACCGTCGGACATTA
AAGGAGTCTGTCCGTCATGCCTACAGTTTGACCGCTATGGAAGGGTTCCTTTACTGGACA
GACTGGCAGACAAGAAACGTTGAAAGGTTGAATTTGAAAAACACGTCACAAATTGTGTCC
ATGCGGAAGAATCTTATTAATTTGATGGGCATCAAAGCGGTCAGTTTGGACCAAGATGGT
CATAAAAGAAGCAATTACTGTGGTACTAACAACGGTGGCTGCACACATTTGTGTCTTCGA
AGTCCAGTGACGTCATCAGGGTACCAATGTGCTTGTCCAACT
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[105-156] 9.42E-10 - T[415-475] 9.42E-10 |
| PANTHER |
LRP4 (IPR030799) - T[120-774] 1.1E-247 |
| SMART |
EGF-like_dom (IPR000742) - T[123-157] 0.0038 - T[426-475] 0.059 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[142-156] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[155-473] 1.8E-117 - T[474-774] 2.7E-93 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[185-228] 0.011 - T[229-271] 5.6E-16 - T[272-315] 5.0E-13 - T[316-358] 2.5E-10 - T[359-400] 0.0014 - T[504-546] 0.0028 - T[548-590] 6.8E-7 - T[591-634] 4.5E-11 - T[635-677] 1.7E-9 - T[678-717] 1.6 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[206-246] 6.1E-11 - T[249-287] 2.2E-7 - T[293-332] 7.5E-9 - T[337-375] 2.3E-8 - T[568-607] 8.4E-9 - T[611-651] 8.6E-11 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[206-248] 17.094 - T[249-291] 15.006 - T[292-335] 15.215 - T[336-378] 13.753 - T[379-403] 5.121 - T[524-567] 11.316 - T[568-610] 13.196 - T[611-654] 14.426 - T[655-680] 8.601 - T[695-740] 8.996 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP4_HUMAN | 47.913 % | 651 | 0 |
| LRP6_HUMAN | 40.097 % | 476 | 5.75E-151 |
| LRP5_HUMAN | 38.699 % | 451 | 5.59E-142 |