- Transcript 'KH2012:KH.L96.24.v1....' >
- Transcript 'KH2012:KH.L7.16.v1.A...' >
- Transcript 'Mooccu.CG.ELv1_2.S40...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S409281.g19003.03.t
Possible name(s)
PAM; TRIM3; TRIM71
Gene model
Location
S409281 [3,202 / 9,683]
Amino acid sequence
Length: 471
>Mooccu.CG.ELv1_2.S409281.g19003.03.p
APYPGYAGKDSTAAIAAGTAVKPAVPSEHIHGSSMHMDDDDEFSEDIQHEPTGHSREGEL
PAHQEESLVQEQEEEQPVLQADTDKQSGQDEEEEHPVLQEDTDKQSGQDEEENHPNVLVD
AEDSARSRGHGYKDDPPVEDIKAVPNWLDASEFIGQVGGVAIDDRGFIHVFHRSHRVWGY
DSFNDDNIYQHQNQPINNDTIFKLDPDSGKIVSQWGRGQFFMPHGATVDPFNNLWLTDVA
MHQVFKYPLDGAMEPTFVLGERFVQGNDASHFCKPTSTAVDKKGFLYVADGYCNGRVVKF
SPDGVYVTEWGKMVTARQMISGSSPPPGVFNIVHSVALTTNDSEIWIADRENGRIQCYTT
DGKFLRIIQDKQNLGKKIFAISFSENKNGLIHGVNNGASEVVEGFTIDYQTHEIVNKWGV
EQINNPHAIACYRDGTQMYVGQLSGTRVLKFVNNEVVLPPGDTLVPYGAFM
Nucleotide sequence
Length: 1,414
>Mooccu.CG.ELv1_2.S409281.g19003.03.t
GCTCCCTATCCCGGTTATGCTGGAAAAGATTCGACAGCGGCGATTGCAGCAGGGACTGCC
GTCAAACCGGCCGTACCGTCGGAACATATACACGGTTCATCAATGCATATGGATGATGAC
GATGAATTCTCAGaGGACATCCAACATGAACCAACTGGTCATTCTCGTGAGGGTGAACTG
CCTGCCCATCAGGAAGAGTCTCTTGTTCAAGAACAAGAAGAGGAACAACCTGTTTTACAG
GCGGACACTGATAAACAATCTGGGCAGGATGAAGAAGAGGAACATCCTGTTTTACAGGAG
GACACTGATAAACAATCTGGACAAGATGAAGAAGAGAATCATCCCAATGTTCTTGTAGAT
GCAGAAGACTCTGCAAGATCACGAGGACATGGATACAAAGATGATCCTCCTGTTGAAGAT
ATTAAAGCTGTTCCTAACTGGTTGGATGCATCCGAGTTCATAGGTCAAGTGGGAGGAGTT
GCTATTGACGATCGGGGATTCATTCATGTGTTTCATCGTTCTCACAGAGTTTGGGGTTAC
GATTCTTTTAACGACGACAATATATATCAGCATCAAAATCAACCGATTAATAACGATACC
ATATTCAAATTGGATCCCGATTCTGGCAAGATAGTCAGCCAATGGGGCAGAGGACAGTTT
TTCATGCCACATGGGGCTACCGTTGACCCGTTTAATAATTTATGGCTAACAGATGTTGCA
ATGCATCAGGTGTTTAAATATCCTCTAGATGGGGCTATGGAGCCAACATTTGTATTAGGA
GAAAGGTTTGTTCAAGGTAATGATGCTAGCCACTTTTGTAAACCAACATCAACTGCAGTG
GATAAAAAAGGCTTCCTTTATGTAGCAGATGGCTACTGCAACGGGCGAGTGGTGAAATTT
TCACCAGATGGAGTTTATGTTACAGAATGGGGGAAGATGGTTACTGCTAGACAAATGATT
AGTGGTTCCTCTCCACCACCCGGTGTGTTCAACATAGTACACAGCGTTGCCTTGACAACC
AACGATAGCGAAATATGGATCGCCGATCGTGAAAACGGACGGATTCAATGCTACACGACG
GATGGAAAGTTCTTACGTATCATTCAAGATAAACAAAACCTCGGAAAAAAAATATTTGCC
ATCAGCTTCTCTGAAAATAAAAATGGTTTAATCCACGGAGTGAACAACGGAGCCTCGGAA
GTCGTGGAAGGATTTACGATCGACTACCAAACACATGAAATTGTTAATAAATGGGGAGTG
GAACAAATCAACAATCCTCATGCTATTGCTTGTTATCGTGATGGAACACAGATGTACGTT
GGACAACTGAGTGGTACGCGTGTATTGAAGTTCGTAAATAACGAAGTAGTCCTACCACCT
GGTGACACTCTTGTACCATACGGTGCGTTCATGC
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[136-457] 2.0E-103 |
| ProSiteProfiles |
NHL_repeat_subgr (IPR013017) - T[159-183] 4.235 - T[209-250] 8.779 - T[266-303] 11.246 - T[330-361] 10.054 |
| PRINTS |
PHM/PAL (IPR000720) - T[166-184] 1.7E-7 - T[229-248] 1.7E-7 - T[271-294] 1.7E-7 |
| Pfam |
NHL_repeat (IPR001258) - T[272-300] 1.0E-6 - T[330-358] 1.8E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AMD_HUMAN | 40.125 % | 229 | 3.78E-66 |