- Clone 'csga050d23' >
- Clone 'cima883335' >
- Transcript 'Mooccu.CG.ELv1_2.S41...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S411613.g19153.01.t
Possible name(s)
CHD6; CHD8; CHD9
Gene model
Location
S411613 [7,069 / 21,655]
Amino acid sequence
Length: 1,576
>Mooccu.CG.ELv1_2.S411613.g19153.01.p
MYGANPSQQGIMNGGGPARGPYQPVRVPQNMQTMNPMQQGQMRGMQQGGMSSHPRQMYGN
PGSNPYPGGVMSSSHFPTSSAQHNFGMQRSAMSMPDASGMKTNSMPGMQQHPQYPGGDYG
HMSRPTYSGQPTMSYSTNSMQHMQRPPSQGGMYGGPSYGGIQAGGQIAHMPPGGATISAS
NKAEMPSQQMPSNMPSYSSMQQSLPQKQQLPTVATGSYMQRGASMHGDNSKQPGYYSRLP
NSNQPAGYPSGYPNSMADGTQRMSHPPGTMVRMQPPSGSHTSAQMGYPGHQTQHRFDAQS
HQSQYLGSNHPIPQTVSPRQNIPSASPHLQSPALPQSPAAGSNSISRSRIPSQQGGQTSM
PMRSPRPYDNKGPMSPRMNYPNQSPRYQNTANYNQISQSPNVNANATPTPNSYGGRFLSP
NSGVNTTLSGVPAHQSAQSNMKPYGGNPMQMQHMSSNATGGQPQYPGVRMPDMQGGYPPN
QWGPRRPSPMQSPPNMMQNQPMQPPLSSPQNNQMAPPKSSSSIAGGPAVPTNISTKALQD
PSMVNTDFSLDSLLSDPMDAGGSFMQQLQDINSNNASVNNSISANNKPIETLVQNQQLQS
NDQLSAPVQQGQMDIVTSQIIPMPSATVSTNQQSRLAVNNIAQNQNVPMMNENVSPNKVS
EENKSNMSMPTPHRLPTLENMNFNNLDSISNKQDIPPISQPTYSSAPVSSSLNNAFTTTS
TTATSNITATEATENESANTTQSVFTPVTSTIPVQSTASIQPSQPTNEAPPEMMSPENKP
VPRFSSPPQIATSSSAESSVQSSLAVPTSSQTTMAPPISNFPPKPQEFYNEASPNVAANP
PINQQVPPGGTAPFPASAPGMGSPPHQQVHYPNSTTVPGKPPPNSIAVPPHPQAQVNMQN
RMTHPMQQGPNYRPPGPMDPRMPNQMPPHGQPPGYRHMGPQPGMPPNAAYPQQHPHGPPG
QPGPRPYPYPRPPYNPNMPPQMNYMPRPGVMRHEMGGPMPYGPQAMPPHIQQQHQHLQML
ERDIHNFQMQLRTEQNPARVEEINRRLVELENRRHHIINQLRQSHGGPMPGIELKSPPVG
VMPPNAEEMSSAKKKRARQKKELKMGEDGELKDKPPKKKKKKELIPGALKSKKKKKSDKE
EGDDAAYMPMISEGGSDSSMPFSQPLEQQTAEPVDAVEDPTYTLPMKRKKKPPATTIKPN
KKKKRKRGEESDEEHSIKVTPPPSPEDSYIEKRRSARNVKRKRYTESIELQLSDDGIEPE
EGELLKQQQQAVQQDTGTDEDQLIVDKILGMRIRKVPIYKSPKKDANPIKNAQSNEEEKA
TKLENTEGNENTVRPTSPSADNNKSNEVASTDTVSTINKEHTVPEHQNKHPEPEVVGYNE
DEEFLIKFKNFSYLHCEWKTLKEIRDKRADAKIKRYKTKQAQMNDFLQYENEEPFNPDFT
VVDRVLDVSSHAEDGKMVKHYLVKWCSLPYEESTWESEESVDNIKIREFEMRCAYRPPEM
KMMVPPKHMWHKLTLQDSYFKNDNQLRDYQLEGISWLLFNWYNRRNCILADEMGLGKTIQ
SITFLQKIFDHGIQA*
Nucleotide sequence
Length: 7,250
>Mooccu.CG.ELv1_2.S411613.g19153.01.t
TTAGAATGTTGTGTATAGGGTTAGCCATTAAATAGGCCGGTTATAAATATATTATTTGTA
GTAAAAAACTAGCCATAGAAATCGATGTAATCATGGATGAACATTCATAAACAAACATGT
ATGGAGCTAACCCTTCTCAACAAGGAATAATGAATGGTGGAGGACCTGCAAGGGGTCCTT
ATCAACCTGTACGTGTCCCGCAGAATATGCAAACGATGAATCCGATGCAACAAGGTCAAA
TGCGAGGAATGCAACAAGGTGGAATGTCTTCACATCCTCGACAGATGTATGGCAATCCTG
GAAGCAACCCTTATCCTGGTGGAGTAATGAGTTCATCACATTTTCCAACAAGCTCGGCGC
AACATAATTTTGGCATGCAAAGATCCGCGATGTCAATGCCAGATGCAAGCGGAATGAAGA
CAAATAGTATGCCTGGAATGCAGCAGCATCCTCAGTATCCAGGAGGAGATTATGGACATA
TGTCTCGTCCAACTTACAGTGGTCAACCGACAATGAGTTATTCAACAAATTCAATGCAAC
ATATGCAGAGACCGCCTTCACAAGGTGGGATGTATGGGGGGCCCAGTTATGGAGGAATAC
AAGCAGGTGGTCAGATAGCCCATATGCCTCCTGGTGGTGCAACGATAAGTGCAAGCAACA
AAGCAGAAATGCCCTCTCAACAAATGCCATCAAATATGCCGAGTTATAGCTCGATGCAAC
AGTCACTGCCTCAAAAACAGCAACTACCAACAGTTGCTACTGGGTCGTACATGCAAAGAG
GTGCATCAATGCATGGAGATAACTCGAAGCAGCCTGGGTATTACTCAAGACTACCGAATT
CCAACCAGCCAGCAGGTTATCCATCTGGTTACCCAAATTCAATGGCAGATGGTACACAGA
GAATGTCACATCCACCTGGTACAATGGTAAGAATGCAACCACCAAGTGGATCGCATACTT
CCGCTCAAATGGGCTACCCTGGTCATCAAACACAACATCGCTTTGATGCTCAATCTCACC
AGAGTCAATATTTGGGTTCGAATCATCCTATTCCGCAAACTGTATCTCCTCGTCAAAATA
TTCCTTCTGCCTCTCCGCATCTTCAGTCTCCTGCTTTACCACAGTCTCCGGCAGCCGGTT
CAAATTCAATATCACGATCAAGAATACCATCTCAGCAAGGAGGCCAGACATCTATGCCAA
TGAGATCTCCTCGACCTTATGATAACAAAGGGCCAATGTCCCCTAGAATGAATTATCCAA
ACCAATCTCCACGTTATCAAAACACTGCAAATTATAACCAAATTTCACAGTCTCCAAATG
TTAATGCCAATGCAACCCCAACACCAAATTCTTATGGCGGAAGATTTCTTTCCCCAAACT
CAGGAGTGAACACGACATTGAGCGGAGTCCCAGCACACCAATCTGCACAGTCCAACATGA
AACCATACGGTGGAAATCCAATGCAGATGCAGCATATGAGTTCAAATGCAACCGGAGGTC
AACCACAGTATCCGGGAGTTCGAATGCCAGACATGCAGGGAGGTTATCCGCCAAACCAAT
GGGGTCCTCGTCGACCATCTCCCATGCAAAGTCCTCCAAATATGATGCAAAATCAACCCA
TGCAGCCCCCTCTTAGTTCACCACAAAATAATCAAATGGCTCCTCCCAAAAGTTCGTCAT
CAATTGCAGGTGGTCCAGCAGTTCCAACCAACATTTCAACCAAGGCACTTCAAGATCCGT
CTATGGTCAACACAGACTTTAGTTTGGATTCATTGTTAAGTGACCCAATGGACGCTGGAG
GCAGTTTTATGCAGCAATTGCAAGACATTAACTCAAACAATGCATCTGTAAATAACTCGA
TCAGTGCTAATAATAAACCTATTGAAACCCTGGTTCAAAATCAACAACTACAAAGCAATG
ATCAGCTGTCAGCTCCTGTACAACAAGGACAAATGGATATTGTAACTAGTCAAATCATTC
CAATGCCCTCTGCCACAGTGTCCACTAACCAACAAAGCAGATTGGCTGTCAATAATATTG
CACAAAATCAGAATGTACCAATGATGAATGAGAATGTATCTCCAAATAAAGTTTCAGAAG
AGAATAAGTCCAACATGAGTATGCCAACTCCACATCGTCTGCCAACTTTGGAAAACATGA
ACTTCAATAATCTTGACTCGATTAGTAACAAGCAAGATATTCCTCCCATTTCCCAACCCA
CATATTCTTCTGCTCCTGTTAGTTCTTCTTTAAATAATGCGTTTACAACCACTAGTACAA
CAGCAACTTCAAACATCACCGCTACGGAGGCCACAGAAAACGAGAGTGCAAACACAACAC
AGTCTGTGTTTACGCCAGTGACATCTACAATACCTGTACAAAGTACAGCTTCTATCCAAC
CATCACAACCTACAAATGAAGCCCCACCTGAGATGATGTCTCCAGAAAACAAACCAGTTC
CAAGATTTTCATCACCTCCACAAATTGCCACAAGTTCGTCAGCCGAATCATCAGTTCAGT
CGTCACTTGCTGTGCCTACCAGCAGTCAAACTACCATGGCTCCTCCAATTAGTAACTTTC
CACCAAAACCTCAAGAATTTTACAATGAAGCATCGCCAAATGTAGCAGCCAACCCACCTA
TAAACCAACAGGTGCCTCCTGGTGGTACGGCACCATTTCCTGCTTCAGCTCCTGGTATGG
GTTCTCCTCCACATCAGCAAGTTCATTATCCCAATTCGACGACTGTTCCTGGGAAACCCC
CTCCCAACTCAATTGCTGTTCCACCACATCCTCAAGCGCAAGTAAACATGCAAAATCGAA
TGACTCATCCCATGCAACAAGGACCAAATTATCGACCACCTGGTCCCATGGATCCAAGAA
TGCCAAATCAAATGCCACCACATGGTCAGCCACCTGGTTATCGACACATGGGTCCACAAC
CAGGGATGCCACCTAATGCTGCATATCCCCAACAACATCCACATGGTCCACCTGGACAAC
CAGGCCCAAGACCTTACCCTTATCCACGACCACCTTATAACCCGAACATGCCACCTCAGA
TGAATTACATGCCACGTCCTGGGGTAATGAGACATGAAATGGGCGGTCCAATGCCGTATG
GTCCTCAGGCGATGCCACCACATATTCAACAACAGCATCAGCATCTACAAATGCTTGAAC
GGGACATTCATAACTTTCAAATGCAATTAAGAACGGAACAGAATCCCGCACGGGTCGAAG
AGATAAATCGTCGATTGGTTGAACTTGAAAATCGAAGACATCATATAATCAATCAGCTTC
GGCAATCACATGGAGGTCCAATGCCAGGCATCGAACTAAAATCTCCACCAGTTGGTGTAA
TGCCACCAAATGCTGAAGAGATGTCTTCTGCCAAGAAGAAACGAGCAAGGCAGAAGAAAG
AGTTGAAAATGGGTGAAGATGGTGAGCTTAAAGATAAACCACCAAAGAAGAAGAAGAAGA
AAGAACTCATTCCCGGAGCGCTGAAATCTAAAAAGAAGAAGAAGTCTGACAAGGAAGAAG
GAGATGATGCTGCGTATATGCCAATGATATCGGAGGGTGGATCCGATTCTTCTATGCCAT
TTTCACAGCCGCTTGAGCAGCAGACTGCGGAACCAGTCGACGCTGTTGAAGATCCGACTT
ACACCCTTCCAATGAAGCGGAAGAAAAAGCCTCCTGCGACAACGATCAAGCCAAATAAGA
AGAAGAAGAGGAAGCGGGGTGAAGAATCTGATGAAGAACACAGTATCAAAGTGACTCCTC
CACCTTCCCCGGAAGACAGCTATATTGAGAAACGTCGTTCTGCACGCAACGTTAAACGGA
AACGTTACACGGAATCCATCGAACTTCAACTCAGCGATGATGGAATTGAGCCAGAAGAAG
GGGAATTACTCAAACAGCAACAACAGGCAGTCCAACAGGATACTGGAACGGATGAAGATC
AACTGATCGTGGACAAAATCCTCGGAATGCGAATTCGAAAAGTGCCAATTTATAAATCGC
CGAAAAAGGATGCCAACCCAATAAAAAATGCTCAAAGCAACGAAGAAGAAAAGGCAACAA
AATTAGAAAATACAGAAGGCAACGAAAACACTGTGAGACCAACATCGCCCTCTGCTGACA
ACAATAAATCGAACGAAGTAGCGAGTACAGACACTGTATCCACAATTAATAAAGAACACA
CTGTGCCGGAACATCAAAATAAACATCCGGAACCAGAAGTAGTGGGATACAATGAAGATG
AAGAATTTTTAATTAAGTTTAAAAATTTCTCGTATTTGCATTGTGAGTGGAAGACATTGA
AAGAAATCCGTGATAAACGTGCTGATGCAAAGATCAAACGATACAAAACAAAACAAGCAC
AAATGAATGACTTTCTGCAATACGAGAACGAAGAGCCGTTTAATCCGGACTTTACAGTGG
TGGATCGGGTGCTTGATGTTAGTTCTCATGCAGAGGATGGAAAGatggtaaagcattact
tggtgaaatggtgttcacttccgtatgaggaaagtacgtgggaaagcgaggaaaGTGTGG
ACAATATAAAGATTCGCGAGTTTGAGATGCGATGTGCGTATCGTCCACCTGAGATGAAGA
TGATGGTACCTCCGAAGCACATGTGGCATAAGTTAACCTTGCAAGATTCATACTTCAAGA
ACGATAACCAACTTCGTGATTACCAGTTGGAAGGTATAAGCTGGTTGTTGTTCAACTGGT
ACAACAGACGGAACTGCATTCTTGCGGATGAAATGGGTTTGGGTAAAACCATTCAATCAA
TTACATTTCTTCAAAAGATTTTTGATCATGGAATACAGGCTTGATGAGATTCCTGGATGT
TATAAATTGCACGCGGTGATTACAACATACGAAATGATCGTTCTCGAAAACTCGCATTTG
GCCAACATCGACTGGCGTTGTTTGATAATTGATGAAGCGCATCGATTGAAAAATCGAACA
TGCAAACTCTCCGACTCACTCAATCAAATGAATCTTGAATTTAAAGTCCTGTTAACTGGA
ACTCCTCTTCAAAACAACATCGAAGAATTATTTTCCCTCCTAAACTTCTTGCAGCCCGAC
ACGTTTAACTCGGAGCAAGCATTTTCCCTCGAGTTTGGAACCTTGAAAGACAACTCACAG
GTTGAGAAACTGCAAGAGTTATTGAAACCGATGATGCTTCGGCGATTGAAAGAAGACGTT
GAAAAATCCATCGCTCCAAAGGAGGAAACCATCATTGAAGTGGAACTGACCAACATTCAG
AAGAAGTATTACAGGGCGATCCTTGAGCGTAATTTTGAGTTCTTGTCGAAAGGAACGTCA
AGCGGTAATGTTCCAAACTTAATGAACACGATGATGGAACTACGAAAATGCTGCAACCAT
CCTTACCTCATCAAAGGTGCTGAAGACAAAATTCAAGCAGAGTATCTGGCCGAACATCCT
GATAATTTCAATGCACTTCAAGTGATGATTCAAAGTGCAGGAAAGCTTGTCCTCATTGAC
AAACTGCTGCCGAAGTTGAAAGCTGGTGGTCACAAAGTTCTTGTATTCTCACAAATGGTG
AAGTGTTTGGATATTCTGgaagattatttgatgcagaaCCAGTACTTCTACGAGCGAATT
GATGGATGTGTTCGTGGCAACGACAGGCAGATGGCCATCGATCGATTCAGCAGACCAGGT
TCTGATCGTTTTGTGTTCCTCTTGTGCACGCGAGCCGGTGGACTTGGCATCAACTTGACA
GCTGCCGACACGGTTATAATATTCGACTCAGATTGGAATCCTCAGAATGATTTGCAGGCA
CAAGCAAGATGTCATCGTATCGGACAACAGAAATCTGTGAaagtttatcgcttgattaca
cgtaactcgtatgaacgcgagatgttcgataaagcaagtatgaaacttggacttgataaa
gctgttctacaatccatcagtggaagacaagatcaaaccttgGCACAACAACCAGCGTTA
TCCAAACATGAAGTTGAAGACTTACTGAAGCGTGGTGCTTACGGTGCAATCATGGATGAT
GATGACGCCGCAAATAAGTTTTGCGAAGAAGATATTGATTCAATCTTGCAACGACGAGCG
CATACCATCACTATCGAGAGTGAGAAAGGGTCAACGTTTTCAAAGGCAAGCTTTGTCTCT
GCGGAAGACAGAACTGATATTTCTCTTGATGATCCAAACTTTTGGGAGTTATGGGCAAAG
AAAGCAGATTTGGATCTGGACAGGATGACCAACAACAAGCTGATTATGGAACAACCACGT
CGACGAAAGCAAACTCGTCGGTTTGGTGGAATGACTGCTGATGATGATGTGCTTGCCGAG
ATCGGATCCGAGTCGGATTCAGATTACGAAGATCGTCCAAACACTCGAAAACAAAAGAAT
AAATCAAATAAGAGCATGTGGTCACGTAGAGACTGTTTCAGAGTTATTAAAAGTTTACTT
ACATTCGGATGGGGTCGGTGGAAAATCACACTTGAGAAATGTGGTTTCCCAACATATGTG
ATGGAGCAAGATCTTGAGGAAATTTGTCGAGTGGTTCTCATTTACTGTCTCAAGTTTTAC
AATGGCGATGAAAAGATCAAACTGTTCATTTGGGATCTGATAACTCCAGCAGGACATGCA
AGCATCAATGGCATTGACTTCAAGAACCATGAAGGTTTATCTGCTCCTGTTCCACGAGGC
CGCAAAGGTCGAAAGGCCAAAGAGGACCCTGAAAGAAAACAACAGATTGTAGAAAGGGAT
TGGGCAAAAGACATCAAAGTGGATGTCATTCTTCAAGATGACGGTTTCAAGAAACATCTG
CAACATCAATGCAATAAAGTTCTCTTACGTATCCGTACATTGTATTATCTTCGAACTGAG
ATCTTGGGTCCTTATGGAACCAGTATTGAGGAAGGAGCACCAGCAAAGTCGTTGGACATT
GAAATCCCTGAAAAagttggtgatccattgactgcgtggtgggacgcggaatgcgataag
agtctgatgattggcgtgtataaacatgGTTACGAAAAGTACAATCTGATTCGCGCCGAT
CCAACATTGTGTTTCCTTGAAAAAGTTGGAAGACCAGATGAAAAAGCAATTGCAGCCGAA
CTTGAAGTGGATAATGACGGTGATGCTGGTCCAGATCCTGAATACAAACCTGCGAAGGTT
GTCTTTAATGATTACTCAGAATTCGAGGATTCACCAACCCCCAACACACC
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1599-1700] 14.772 |
| Gene3D |
SNF2-like_sf (IPR038718) - T[1606-1744] 1.9E-154 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1623-1735] 4.09E-27 - T[1737-2026] 4.46E-66 |
| Pfam |
SNF2_N (IPR000330) - T[1625-1804] 3.3E-41 |
| CDD |
Helicase_C (IPR001650) - T[1834-1956] 3.22322E-26 |
| Pfam |
Helicase_C (IPR001650) - T[1835-1948] 1.2E-17 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[1838-1987] 18.337 |
| SMART |
Helicase_C (IPR001650) - T[1864-1948] 1.0E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHD8_HUMAN | 61.194 % | 257 | 8.62E-69 |
| CHD9_HUMAN | 60.101 % | 250 | 7.96E-67 |
| CHD6_HUMAN | 58.673 % | 239 | 3.08E-63 |