- Clone 'cima815695' >
- Transcript 'Mooccu.CG.ELv1_2.S44...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S442408.g21514.02.t
Possible name(s)
LHCGR; RXFP1; RXFP2
Gene model
Location
S442408 [3,192 / 5,520]
Amino acid sequence
Length: 460
>Mooccu.CG.ELv1_2.S442408.g21514.02.p
KNLRCDYYIACDKAEDEFNCSDSRFYCEDGKMPIFVRKEQIFDGIPDCEDWSDECPSKTS
LRKENIFSSRYELIANSVLRTFIWIMGFAALIGNMAVIISECKDLYALKNKIGGIFANRC
LIINLAISDLLMGIYLITLAAVGIQFQGNCCSNELNWRSSNKCTALGIISTISAEASVFS
LLAMTAIRLFSVKKPIKAMQTPKKQIVIIILAACWFISLLLALMPIAPSLTDVFMEEIFF
KNNPLVSGNTTSLKDFHKTLKEFAAFDNASDITKKDVIEIPSMSWRELEVLSKKFTHSKY
LDPLYFGYYSTHGVCLPKFFLTTYDKSWRFSFIVNLINFSSFIFVMVSYLVIMYESTHRP
QLGQSNGPKDAECKRLATLERKIFRLIVTDFCCWMPICVMAFINLSGIKVPPAAYAFSAI
ILLPINSSLNPILYSNVTEIIGQSFKKIPSKFVSNATTSG
Nucleotide sequence
Length: 1,380
>Mooccu.CG.ELv1_2.S442408.g21514.02.t
AAAAACCTTCGATGTGAttattatattgcctgcgataaagctgaggatgaatttaactgt
agcgatagtaggttcTACTGTGAAGACGGAAAGATGCCAATATTTGTTCGGAAAGAGCAG
ATCTTCGACGGAATTCCAGATTGTGAGGATTGGAGTGATGAATGTCCTTCCAAGACGTCC
CTTCGAAAAGAAAATATATTCTCGTCACGCTACGAACTCATTGCTAATTCTGTGCTACGA
ACATTCATATGGATCATGGGGTTTGCTGCATTGATCGGAAATATGGCTGTTATAATTTCG
GAATGTAAGGATTTGTACGCACTCAAGAACAAAATTGGTGGAATATTTGCTAATCGATGT
TTGATTAtaaaccttgcaatatccgacctcttgatgggAATATATTTGATTACATTGGCT
GCAGTTGGTATTCAGTTTCAAGGAAATTGTTGCTCCAACGAATTGAATTGGAGATCCAGC
AATAAGTGCACTGCACTAGGAATAATATCTACCATCTCAGCCGAAGCATCGGTCTTCTCG
TTGTTAGCTATGACGGCAATTCGTCTTTTCTCTGTGAAAAAACCCATAAAGGCGATGCAA
ACTCCTAAAAAGCAGATAGTCATCATCATCTTGGCTGCTTGTTGGTTTATTTCCTTATTA
TTAGCACTGATGCCAATTGCCCCAAGTCTAACTGACGTTTTTATGGAAGAAATCTTCTTC
AAAAACAATCCTCTGGTATCCGGAAATACAACGAGTCTCAAGGACTTTCATAAAACTTTG
AAAGAATTCGCTGCCTTCGACAACGCTTCAGACATCACCAAAAAAGATGTGATTGAGATA
CCTTCCATGTCTTGGAGAGAATTGGAAGTATTGTCAAAGAAGTTTACACATAGTAAATAT
TTAGATCCTTTATATTTCGGTTACtacagcacacatggagtttgtcttccaaagttcttc
ttaacgacatatgacaaatcatggaggttttcatttatagtaaacctgatcaacttctct
tcattcatcttcgttatggtttcttacctCGTGATAATGTATGAATCGACTCACAGACCA
CAACTCGGTCAGTCAAACGGTCCTAAAGATGCTGAATGTAAAAGACTGGCCACCTTGGAA
AGAAAGATATTTCGTCTGATTGTGACTGACTTTTGCTGTTGGATGCCAATTTGTGTGATG
GCTTTCATCAATCTATCCGGCATCAAAGTTCCACCTGCGGCTTATGCTTTCTCTGCAATC
ATTCTGCTACCCATCAACAGTTCTCTTAATCCAATACTCTATTCAAATGTTACGGAAATT
ATTGGACAAAGTTTCAAGAAGATACCATCAAAATTTGTTTCAAATGCAACTACTTCTGGG
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[9-451] 1.3E-87 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[19-57] 4.32E-5 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[20-54] 1.24605E-4 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[78-102] 4.4E-16 - T[118-139] 4.4E-16 - T[170-192] 4.4E-16 - T[206-227] 4.4E-16 - T[379-403] 4.4E-16 - T[416-442] 4.4E-16 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[93-434] 19.188 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[118-226] 2.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LSHR_HUMAN | 27.097 % | 80.5 | 4.49E-16 |