Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S488923.g25507.01.t

Possible name(s)

ARPP21; R3HDM1; R3HDM2

Gene model

Mooccu.CG.ELv1_2.S488923.g25507

Location

S488923 [3,116 / 7,674]

Sequences

Amino acid sequence

Length: 272

>Mooccu.CG.ELv1_2.S488923.g25507.01.p
RVDYMKFSAMTSYHRMLLHRVAAYFGMDHNVDETGKCVIVNKIKETKIPEFRFAEYISDC
NLIQNTDDLRRRSILKRSNQSKSFDHGQSNRNDWKDNRQRSLEEREENYEKIRARIFNAE
ASSGKLSSVAITTTTQLSNGSVTPSCTKTSPPTTRPRPTITVLPRSSSATCLTDSTTSQT
SPSLNTKTSCGQKTANQRTPATASERKTTPLSATANGYETNSTTPPNVATKNDGYSPREQ
RIPTYNDYPYNGAPPPVPVEHQQFPPRYHGNV

Nucleotide sequence

Length: 816

>Mooccu.CG.ELv1_2.S488923.g25507.01.t
AGGGTGGATTACATGAAATTTAGTGCAATGACTTCGTACCATCGAATGTTACTTCATCGC
GTGGCAGCTTACTTTGGTATGGATCATAATGTTGATGAGACTGGAAAGTGTGTCATCGTT
AACAAGATAAAAGAAACCAAAATACCTGAGTTTCGTTTTGCTGAATATATTTCGGATTGC
AATTTGATTCAAAACACAGATGACTTGCGTAGGCGGAGCATACTCAAACGAAGCAACCAA
TCAAAGAGCTTCGATCATGGCCAGTCGAATCGCAACGATTGGAAAGATAATCGCCAGCGA
TCGTTGGAAGAACGTGAGGAAAATTACGAGAAGATTCGTGCAAGAATATTCAATGCTGAA
GCAAGCAGTGGCAAACTATCATCTGTCGCCATAACAACAACAACTCAATTATCAAATGGT
TCTGTCACGCCGTCTTGCACAAAGACCTCACCACCAACGACACGACCTCGACCTACCATC
ACTGTGCTACCAAGAAGCTCTTCAGCAACATGCCTTACAGATTCTACTACTTCACAAACA
TCACCATCGTTGAACACAAAGACGAGTTGTGGACAAAAGACTGCGAATCAACGTACACCA
GCAACCGCAAGTGAAAGAAAAACTACACCGTTGTCTGCAACAGCGAATGGATATGAAACC
AACTCCACGACCCCACCAAATGTTGCAACAAAGAACGATGGGTACAGTCCACGAGAGCAG
AGGATACCCACATACAATGATTACCCGTACAATGGTGCACCTCCTCCCGTTCCTGTAGAA
CATCAACAATTTCCCCCGCGTTACCACGGAAATGTA

InterProScan

Gene3D	R3H_dom_sf (IPR036867) - T[1-81] 1.7E-24
SUPERFAMILY	R3H_dom_sf (IPR036867) - T[4-79] 1.57E-18
Pfam	R3H_dom (IPR001374) - T[5-42] 8.1E-7
ProSiteProfiles	SUZ (IPR024771) - T[47-121] 12.188
Pfam	SUZ (IPR024771) - T[71-120] 1.1E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ARP21_HUMAN	51.724 %	125	1.7E-32
R3HD1_HUMAN	52.586 %	125	2.62E-32
R3HD2_HUMAN	49.123 %	110	2.56E-27