- Transcript 'Mooccu.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S497346.g26272.01.t
Possible name(s)
ITGB1; ITGB2; ITGB7
Gene model
Location
S497346 [748 / 9,570]
Amino acid sequence
Length: 458
>Mooccu.CG.ELv1_2.S497346.g26272.01.p
XPNDGQCYLDTEGRRYTMANEMDYPSVGHLVQKISDNNIQPIFAVTTAVIKTFNKLHEMI
PKSAVGELSGDSSNVIDLIKDAYENLKGQIVLKVTAPEGIVVEGKQAHCKSGMVDGALEC
DGVQLGDIVNFTLSISSTKCFDEPQVLNVSIVGYSEKTKIIVNSKCDCECSAGSSPNNCS
GNGIYDCGACVCQPGYLGLDCSCDKKDIVGVESYLKNCTQPGSEKVCSERGECLCGLCVC
SPASDRKIYGKFCQCDDASCDRYNRKMCNGHGRCDCGDCICDDGWKGDRCECTQDESGCI
DPGKEGSISCEGAGACVCGECQCNVTKNGLQYRGTYCEISPSQLCEIHKDCVLCKAYGTG
NVTACEEQCTQYTVTLLEGTASKLRSTCRVVDDSNDCSVTFYFEKDGDKIYIETDVKSQV
CPVIMNPMFFIIGIIAAIVGIGLAILLIWKLWTSIKDA
Nucleotide sequence
Length: 1,375
>Mooccu.CG.ELv1_2.S497346.g26272.01.t
NtTCCTAATGATGGTCAATGTTACCTGGATACAGAGGGAAGAAGATACACCATGGCCAAT
GAAATGGATTACCCATCAGTTGGTCACCTTGTACAGAAGATATCCGACAACAACATCCAA
CCTATATTCGCTGTTACCACTGCTGTTATAAAGACATTTAATAAACTTCATGAAATGATT
CCAAAATCTGCTGTCGGTGAATTGTCCGGAGATTCGTCCAACGTCATCGATTTAATCAAA
GATGCTTACGAGAATCTTAAAGGACAGATCGTACTAAAGGTGACAGCACCAGAAGGGATT
GTTGTAGAAGGCAAACAAGCACATTGCAAAAGTGGAATGGTGGATGGAGCTCTTGAATGT
GATGGTGTGCAATTGGGTGATATTGTGAACTTTACATTGTCGATCAGTTCAACCAAATGT
TTTGATGAGCCGCAAGTACTGAATGTATCAATTGTCGGCTACAGCGAGAAAACAAAAATC
ATTGTTAATTCAAAATGTGACTGCGAATGCTCTGCTGGTTCAAGCCCAAATAACTGCAGT
GGAAATGGTATATACGACTGTGGGGCGTGTGTGTGTCAACCGGGCTACTTGGGGTTGGAT
TGTTCATGCGATAAGAAGGATATTGTTGGTGTTGAATCTTACTTGAAGAACTGTACGCAA
CCGGGATCGGAGAAAGTTTGCAGTGAGAGGGGAGAATGCCTATGTGGACTCTGCGTTTGC
TCACCTGCTTCTGATCGAAAAATCTATGGAAAATTCTGCCAATGTGATGATGCGTCATGT
GATCGATACAACAGGAAGATGTGTAACGGGCACGGAAGATGTGATTGTGGCGACTGCATA
TGCGATGACGGTTGGAAAGGTGATCGTTGTGAATGCACACAGGATGAAAGCGGGTGCATC
GATCCAGGCAAAGAAGGTTCAATTTCTTGTGAAGGCGCTGGTGCATGTGTTTGTGGCGAA
TGTCAATGTAACGTAACGAAGAACGGCTTACAATATCGTGGAACATATTGCGAAATATCA
CCTTCACAATTGTGCGAGATTCACAAGGACTGTGTTCTGTGCAAAGCTTATGGAACGGGG
AATGTAACAGCATGTGAGGAACAATGTACACAATACACTGTCACATTGCTTGAAGGAACT
GCTTCAAAACTTCGTAGTACCTGTCGTGTTGTTGACGATTCCAACGATTGCTCGGTTACT
TTTTACTTCGAAAAAGATGGAGACAAGATCTACATTGAGACTGATGTTAAATCACAAGTA
TGTCCTGTGATTATGAATCCAATGTTCTTCATTATTGGTATCATCGCTGCCAtcgtgggg
atcggtctggccatcctattgatctggaagttatggacatccatcaaagatgcga
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-168] 1.8E-9 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[2-87] 5.11E-18 |
| PANTHER |
Integrin_bsu (IPR015812) - T[2-457] 1.3E-121 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[2-90] 8.6E-55 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[2-88] 3.1E-25 |
| PRINTS |
Integrin_bsu (IPR015812) - T[23-46] 9.7E-41 - T[59-83] 9.7E-41 - T[227-240] 9.7E-41 - T[425-442] 9.7E-41 - T[442-459] 9.7E-41 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[115-172] 5.02E-10 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[268-281] . - T[310-323] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[344-422] 4.05E-9 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[345-426] 2.9E-15 |
| Pfam |
Integrin_bsu_tail (IPR012896) - T[345-422] 2.3E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 36 % | 269 | 5.07E-82 |
| ITB3_HUMAN | 36.325 % | 261 | 2.12E-79 |
| ITB1_HUMAN | 37.662 % | 268 | 1.27E-81 |