- Transcript 'Mooccu.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S497346.g26272.02.t
Possible name(s)
ITGB1; ITGB2; ITGB7
Gene model
Location
S497346 [748 / 10,455]
Amino acid sequence
Length: 628
>Mooccu.CG.ELv1_2.S497346.g26272.02.p
GMPVSLNISYKQAEDYPVDLYYLLDLSHSMKDDLESLRKLGKRLGESMSSITRDFRLGFG
SFVDKTVMPYISMVPNKLKNPCNDQDPCAPAYSFSNDLPLTSNLDAFTSSVNNVSYSSNL
DAPEGGFDAMMQAIVCKNQINWRKDATHLLVYSSDAVFHYAGDGKLGGIVIPNDGQCYLD
TEGRRYTMANEMDYPSVGHLVQKISDNNIQPIFAVTTAVIKTFNKLHEMIPKSAVGELSG
DSSNVIDLIKDAYENLKGQIVLKVTAPEGIVVEGKQAHCKSGMVDGALECDGVQLGDIVN
FTLSISSTKCFDEPQVLNVSIVGYSEKTKIIVNSKCDCECSAGSSPNNCSGNGIYDCGAC
VCQPGYLGLDCSCDKKDIVGVESYLKNCTQPGSEKVCSERGECLCGLCVCSPASDRKIYG
KFCQCDDASCDRYNRKMCNGHGRCDCGDCICDDGWKGDRCECTQDESGCIDPGKEGSISC
EGAGACVCGECQCNVTKNGLQYRGTYCEISPSQLCEIHKDCVLCKAYGTGNVTACEEQCT
QYTVTLLEGTASKLRSTCRVVDDSNDCSVTFYFEKDGDKIYIETDVKSQVCPVIMNPMFF
IIGIIAAIVGIGLAILLIWKLWTSIKDA
Nucleotide sequence
Length: 1,885
>Mooccu.CG.ELv1_2.S497346.g26272.02.t
GGAATGCCCGTTTCGTTGAATATTTCATATAAACAAGCAGAAGATTATCCTGTGGATTTG
TACTACTTGCTCGATCTCTCACATTCCATGAAAGACGATTTAGAATCTCTCAGGAAACTC
GGAAAACGCTTGGGAGAGAGCATGTCTTCCATTACTCGAGATTTTAGACTTGGCTTTGGA
TCGTTTGTTGACAAAACTGTTATGCCATACATTTCGATGGTACCTAACAAATTGAAAAAT
CCTTGCAATGACCAAGATCCATGTGCTCCAGCGTACAGTTTCAGTAACGACCTTCCATTG
ACCTCCAACCTCGATGCTTTCACATCTTCCGTAAACAACGTTTCCTACTCGTCAAATTTA
GATGCACCTGAAGGTGGTTTCGATGCTATGATGCAAGCGATAGTATGCAAGAATCAAATC
AATTGGCGTAAAGATGCAACACATTTGCTTGTGTACTCAAGTGATGCGGTCTTTCATTAT
GCTGGTGATGGTAAACTTGGTGGTATAGTCATTCCTAATGATGGTCAATGTTACCTGGAT
ACAGAGGGACGAAGATACACCATGGCCAATGAAATGGATTACCCATCAGTTGGTCACCTT
GTACAGAAGATATCCGACAACAACATCCAACCTATATTCGCTGTTACCACTGCTGTTATA
AAGACATTTAATAAACTTCATGAAATGATTCCAAAATCTGCTGTCGGTGAATTGTCCGGA
GATTCGTCCAACGTCATCGATTTAATCAAAGATGCTTACGAGAATCTTAAAGGACAGATC
GTACTAAAGGTGACAGCACCAGAAGGGATTGTTGTAGAAGGCAAACAAGCACATTGCAAA
AGTGGAATGGTGGATGGAGCTCTTGAATGTGATGGTGTGCAATTGGGTGATATTGTGAAC
TTTACATTGTCGATCAGTTCAACCAAATGTTTTGATGAGCCGCAAGTACTGAATGTATCA
ATTGTCGGCTACAGCGAGAAAACAAAAATCATTGTTAATTCAAAATGTGACTGCGAATGC
TCTGCTGGTTCAAGCCCAAATAACTGCAGTGGAAATGGTATATACGACTGTGGGGCGTGT
GTGTGTCAACCGGGCTACTTGGGGTTGGATTGTTCATGCGATAAGAAGGATATTGTTGGT
GTTGAATCTTACTTGAAGAACTGTACGCAACCGGGATCGGAGAAAGTTTGCAGTGAGAGG
GGAGAATGCCTATGTGGACTCTGTGTTTGCTCACCTGCTTCTGATCGAAAAATCTATGGA
AAATTCTGCCAATGTGATGATGCGTCATGTGATCGATACAACAGGAAGATGTGTAACGGG
CACGGAAGATGTGATTGTGGCGACTGCATATGCGATGACGGTTGGAAAGGTGATCGTTGT
GAATGCACACAGGATGAAAGCGGGTGCATCGATCCAGGCAAAGAAGGTTCAATTTCTTGT
GAAGGCGCTGGTGCATGTGTTTGTGGCGAATGTCAATGTAACGTAACGAAGAACGGCTTA
CAATATCGTGGAACATATTGCGAAATATCACCTTCACAATTGTGCGAGATTCACAAGGAC
TGTGTTCTGTGCAAAGCTTATGGAACGGGGAATGTAACAGCATGTGAGGAACAATGTACA
CAATACACTGTCACATTGCTTGAAGGAACTGCTTCAAAACTTCGTAGTACCTGTCGTGTT
GTTGACGATTCCAACGATTGCTCGGTTACTTTTTACTTCGAAAAAGATGGAGACAAGATC
TACATTGAGACTGATGTTAAATCACAAGTATGTCCTGTGATTATGAATCCAATGTTCTTC
ATTATTGGTATCATCGCTGCCAtcgtggggatcggtctggccatcctattgatctggaag
ttatggacatccatcaaagatgcga
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-338] 3.9E-140 |
| PANTHER |
Integrin_bsu (IPR015812) - T[3-627] 1.2E-208 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[13-257] 1.38E-80 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[13-258] 2.5E-108 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[15-257] 4.7E-133 |
| PRINTS |
Integrin_bsu (IPR015812) - T[16-34] 2.0E-89 - T[56-75] 2.0E-89 - T[88-107] 2.0E-89 - T[121-143] 2.0E-89 - T[148-163] 2.0E-89 - T[193-216] 2.0E-89 - T[229-253] 2.0E-89 - T[397-410] 2.0E-89 - T[595-612] 2.0E-89 - T[612-629] 2.0E-89 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[285-342] 8.37E-10 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[438-451] . - T[480-493] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[514-592] 6.54E-9 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[515-596] 2.9E-15 |
| Pfam |
Integrin_bsu_tail (IPR012896) - T[515-592] 3.7E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 40.495 % | 461 | 3.02E-153 |
| ITB2_HUMAN | 38.941 % | 444 | 3.15E-147 |
| ITB1_HUMAN | 43.218 % | 476 | 5.67E-159 |