- Clone 'AHC0AAA242YA11' >
- Transcript 'Moocci.CG.ELv1_2.S39...' >
- Transcript 'Mooccu.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S497346.g26272.03.t
Possible name(s)
ITGB1; ITGB2; ITGB7
Gene model
Location
S497346 [748 / 10,455]
Amino acid sequence
Length: 625
>Mooccu.CG.ELv1_2.S497346.g26272.03.p
GMPVSLNISYKQAEDYPVDLYYLLDLSHSMKDDLESLRKLGKRLGESMSSITRDFRLGFG
SFVDKTVMPYISMVPNKLKNPCNDQDPCAPAYSFSNDLPLTSNLDAFTSSVNNVSYSSNL
DAPEGGFDAMMQAIVCKNWRKDATHLLVYSSDAVFHYAGDGKLGGIVIPNDGQCYLDTEG
RRYTMANEMDYPSVGHLVQKISDNNIQPIFAVTTAVIKTFNKLHEMIPKSAVGELSGDSS
NVIDLIKDAYENLKGQIVLKVTAPEGIVVEGKQAHCKSGMVDGALECDGVQLGDIVNFTL
SISSTKCFDEPQVLNVSIVGYSEKTKIIVNSKCDCECSAGSSPNNCSGNGIYDCGACVCQ
PGYLGLDCSCDKKDIVGVESYLKNCTQPGSEKVCSERGECLCGLCVCSPASDRKIYGKFC
QCDDASCDRYNRKMCNGHGRCDCGDCICDDGWKGDRCECTQDESGCIDPGKEGSISCEGA
GACVCGECQCNVTKNGLQYRGTYCEISPSQLCEIHKDCVLCKAYGTGNVTACEEQCTQYT
VTLLEGTASKLRSTCRVVDDSNDCSVTFYFEKDGDKIYIETDVKSQVCPVIMNPMFFIIG
IIAAIVGIGLAILLIWKLWTSIKDA
Nucleotide sequence
Length: 1,876
>Mooccu.CG.ELv1_2.S497346.g26272.03.t
GGAATGCCCGTTTCGTTGAATATTTCATATAAACAAGCAGAAGATTATCCTGTGGATTTG
TACTACTTGCTCGATCTCTCACATTCCATGAAAGACGATTTAGAATCTCTCAGGAAACTC
GGAAAACGCTTGGGAGAGAGCATGTCTTCCATTACTCGAGATTTTAGACTTGGCTTTGGA
TCGTTTGTTGACAAAACTGTTATGCCATACATTTCGATGGTACCTAACAAATTGAAAAAT
CCTTGCAATGACCAAGATCCATGTGCTCCAGCGTACAGTTTCAGTAACGACCTTCCATTG
ACCTCCAACCTCGATGCTTTCACATCTTCCGTAAACAACGTTTCCTACTCGTCAAATTTA
GATGCACCTGAAGGTGGTTTCGATGCTATGATGCAAGCGATAGTATGCAAGAATTGGCGT
AAAGATGCAACACATTTGCTTGTGTACTCAAGTGATGCGGTCTTTCATTATGCTGGTGAT
GGTAAACTTGGTGGTATAGTCATTCCTAATGATGGTCAATGTTACCTGGATACAGAGGGA
CGAAGATACACCATGGCCAATGAAATGGATTACCCATCAGTTGGTCACCTTGTACAGAAG
ATATCCGACAACAACATCCAACCTATATTCGCTGTTACCACTGCTGTTATAAAGACATTT
AATAAACTTCATGAAATGATTCCAAAATCTGCTGTCGGTGAATTGTCCGGAGATTCGTCC
AACGTCATCGATTTAATCAAAGATGCTTACGAGAATCTTAAAGGACAGATCGTACTAAAG
GTGACAGCACCAGAAGGGATTGTTGTAGAAGGCAAACAAGCACATTGCAAAAGTGGAATG
GTGGATGGAGCTCTTGAATGTGATGGTGTGCAATTGGGTGATATTGTGAACTTTACATTG
TCGATCAGTTCAACCAAATGTTTTGATGAGCCGCAAGTACTGAATGTATCAATTGTCGGC
TACAGCGAGAAAACAAAAATCATTGTTAATTCAAAATGTGACTGCGAATGCTCTGCTGGT
TCAAGCCCAAATAACTGCAGTGGAAATGGTATATACGACTGTGGGGCGTGTGTGTGTCAA
CCGGGCTACTTGGGGTTGGATTGTTCATGCGATAAGAAGGATATTGTTGGTGTTGAATCT
TACTTGAAGAACTGTACGCAACCGGGATCGGAGAAAGTTTGCAGTGAGAGGGGAGAATGC
CTATGTGGACTCTGCGTTTGCTCACCTGCTTCTGATCGAAAAATCTATGGAAAATTCTGC
CAATGTGATGATGCGTCATGTGATCGATACAACAGGAAGATGTGTAACGGGCACGGAAGA
TGTGATTGTGGCGACTGCATATGCGATGACGGTTGGAAAGGTGATCGTTGTGAATGCACA
CAGGATGAAAGCGGGTGCATCGATCCAGGCAAAGAAGGTTCAATTTCTTGTGAAGGCGCT
GGTGCATGTGTTTGTGGCGAATGTCAATGTAACGTAACGAAGAACGGCTTACAATATCGT
GGAACATATTGCGAAATATCACCTTCACAATTGTGCGAGATTCACAAGGACTGTGTTCTG
TGCAAAGCTTATGGAACGGGGAATGTAACAGCATGTGAGGAACAATGTACACAATACACT
GTCACATTGCTTGAAGGAACTGCTTCAAAACTTCGTAGTACCTGTCGTGTTGTTGACGAT
TCCAACGATTGCTCGGTTACTTTTTACTTCGAAAAAGATGGAGACAAGATCTACATTGAG
ACTGATGTTAAATCACAAGTATGTCCTGTGATTATGAATCCAATGTTCTTCATTATTGGT
ATCATCGCTGCCAtcgtggggatcggtctggccatcctattgatctggaagttatggaca
tccatcaaagatgcga
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-335] 3.0E-136 |
| PANTHER |
Integrin_bsu (IPR015812) - T[3-624] 4.6E-205 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[13-255] 4.4E-104 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[13-254] 3.44E-77 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[15-254] 4.1E-129 |
| PRINTS |
Integrin_bsu (IPR015812) - T[16-34] 9.6E-77 - T[56-75] 9.6E-77 - T[88-107] 9.6E-77 - T[121-143] 9.6E-77 - T[190-213] 9.6E-77 - T[226-250] 9.6E-77 - T[394-407] 9.6E-77 - T[592-609] 9.6E-77 - T[609-626] 9.6E-77 |
| SUPERFAMILY |
Integrin_dom_sf (IPR032695) - T[282-339] 8.37E-10 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[435-448] . - T[477-490] . |
| SUPERFAMILY |
Integrin_bsu_tail_dom_sf (IPR036349) - T[511-589] 6.54E-9 |
| Pfam |
Integrin_bsu_tail (IPR012896) - T[512-589] 3.7E-9 |
| SMART |
Integrin_bsu_tail (IPR012896) - T[512-593] 2.9E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 40.185 % | 452 | 8.1E-150 |
| ITB2_HUMAN | 38.785 % | 437 | 2.15E-144 |
| ITB1_HUMAN | 43.06 % | 469 | 1.85E-156 |