Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S9...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S90...' > 
  3. Transcript 'KH2012:KH.L123.1.v1....' > 
  4. Transcript 'Mooccu.CG.ELv1_2.S53...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S535314.g30750.02.t

Possible name(s)

CIRBP; TRA2A; TRA2B

Gene model

Mooccu.CG.ELv1_2.S535314.g30750

Location

S535314 [2,527 / 6,491]

Sequences

Amino acid sequence

Length: 315

>Mooccu.CG.ELv1_2.S535314.g30750.02.p
MSDSDLEPGEYKQQAARKNRSLTPPGVDHAARSKSRSRSKESVHSRRSGSPRRRSYSRSR
SRSRAGSGRSRSRSYGKRSRSKDNYRSPKRSSYSRRSRSYDKKRRSYSRSRSRSRGSRSP
LSGRKRHIGDRMNPPSSKCLGVFGLSLYTTENDLRDVFSRYGYIDKCNIVIDQKTGRSRG
FGFVYFEETNDAVEAKDRANGMDLDGRKIRVDFSITKRAHTPTPGMYVGRPAPHHSNGPP
RRYDDRGGGGGGDRYDRYDRYDNRDRRGYDKRGGGGGGRYDDRDRYNSRRSPSPYYSGHR
RSPSPYGNGRDRRY*

Nucleotide sequence

Length: 2,734

>Mooccu.CG.ELv1_2.S535314.g30750.02.t
TTTTGATAATGACGTCATAATTAAACAGACAAAAGCTGATCTACAAGCCGCCTTTTTCCT
CAAGCGGCAAGTCTCTCAGTCAGTCTCACTCTCACCATCGTAAACATGCTGCATGTCTGT
CAGTGTACGATTTGAAGTTTGTACAGTGTATATACTGTATAATCCCTGTTTGTATAATGC
AGAATGTTCATTTATTCATGATTAAAGTGCAAAAAAAGGAATACAAAACCATTGTCTATG
GACAAAATAGACTGTGGGGGTATAGTTTAGCCCGCGTGTCTCAGTAGGCTACCGGACCGG
TACCTATACCCCTAAGTGCAGCTTGGTGACTACTGACTATTCAGTAGTTGGTAGTAGTAG
GCCTACGTATTGTCAGATTGTAAGATTGACTTTGTACCCTACCAGTACCAGTTTATCGGC
TTTAGACAGTTGTTGGTACTACATTCGTACATTGTATTTGTATGTTAGTTTAGCTGCTTA
TTACCTGCATGCAGATGTCCGCGATGAGTGCAGAGTGACTCACATATCTGCCTCTGACGT
TATCAGTCATATGAGTCAGTCAGTATACAGTTAATACTTTACAGTACTAACTAACTGACT
AAAAAGGTCAGCTAATCAGAATGTTAGATGGCCTTTTTGTCATTTATTTTTTTGAGAGTT
ACAATTTATTATACAGTCGAGACCAACCGCTGGATACTACACGATTTTCGAACCTTAAAA
AAACAGCGAACCTTATGACGGCCTACTATCATACAAAAACGGTATTAAATGTTTAAAGAG
AGGACATCATTTTGTGCTCACAAATATATATTTATAAAGTAGAGACTTCCAAGAATCCAA
AAAATGTTTAGACTTTTTGAAAAACAAACATATTTTGAAAATCGCATACCATCTACAGAT
CTACTTTCAAATAAACATATATATACGGTATAAAACAGGAAATTATCCTCACAGGGCAAT
CTCTTTAAACTATAAACTGAATAATATTTCAAATTATATGCGTTTTCAATAAAACTGTCC
TGTAATAACCATAGACCAATGCTGCTGTGTTTTAGCATAAAAACTTTCGTAACTTTTGAT
TGACGCGATAAAATTTTCTGGCTTGCGGTGAAAAACTGTATTTTTTGTCTTTTATCACAA
TTTAGCGTCCGATTTTGATTATGTTTATTTGCCGTTGTTTTGGGTTAAAAAAAAACTGCT
ATGTTGTAGCGTACTACGGGTTGAGCACGTAAAATACTAGGTCGGTACGTGACCCGTACC
GTACGGTAATATTCTACGGCACATAGTATTCAGCGGCTGGTATCAACTGTATAGTGTATA
GTCCAGTCAATACAATATGATAGACCTCTAACATTCTACAACCTAGGCCTACAATAGCCT
ACCGTACTATCATTTTGCATAAATGAATTGAATTATTTTTCACCGCCAAAGCTATAGAGC
TCTACATGCAAAACTCACAAAGCTCCTTAAACATGTTAAACATCCACAAAAATCTGCGGT
TGTCCAATAGAAGAGAGTGTTAATAGCGTGTTGTTAAATCATATCTTTTCTTGAATCATT
AATTGTATCGTATCGTGGTATTTAGTTGGATTGTATTTCAGTATTTGTATCTATTATAAA
AATTAAATTTTCATATAAAAAATAATGAGTGATTCGGATCTTGAACCGGGTGAATATAAG
CAACAAGCTGCTCGAAAAAATCGAAGTTTAACCCCACCTGGTGTTGATCATGCAGCTCGT
TCGAAATCCCGTTCTAGATCAAAGGAATCTGTACATTCAAGAAGATCTGGTTCACCGCGC
AGAAGATCATACAGCCGATCAAGATCACGTTCAAGAGCAGGTTCTGGCCGCTCACGCTCT
CGTTCGTATGGCAAGCGATCTCGATCAAAGGACAATTACAGAAGCCCAAAGCGATCAAGT
TACAGTCGTCGTTCTAGAAGTTATGATAAGAAAAGGCGGTCATATTCTCGCAGCCGTTCA
AGGTCCCGTGGAAGTCGATCGCCTCTGTCGGGCAGAAAACGTCATATCGGAGACAGGATG
AATCCACCGAGTAGTAAATGTTTGGGGGTATTTGGTTTAAGTCTTTACACAACTGAAAAT
GACTTACGAGATGTATTTTCAAGATATGGCTATATTGATAAATGCAACATTGTTATTGAC
CAAAAGACTGGCCGATCTCGTGGTTTTGGTTTTGTATATTTTGAGGAAACAAATGATGCT
GTCGAAGCCAAAGATAGAGCAAATGGAATGGATTTGGATGGCCGAAAAATTCGAGTTGAC
TTTTCTATTACAAAACGAGCACACACACCAACCCCTGGGATGTATGTTGGAAGACCAGCT
CCACATCACAGTAACGGTCCACCCCGTCGATATGATGACCGTGGTGGTGGTGGAGGTGGA
GATCGCTATGACCGCTACGATCGTTATGACAACAGGGATCGTCGTGGGTATGATAAAAGA
GGAGGCGGAGGAGGGGGTCGCTATGATGACCGGGATAGATACAACAGCCGACGCTCGCCA
TCACCTTATTACAGTGGTCACCGACGTAGCCCAAGTCCATATGGAAATGGAAGAGACCGT
CGATACTGAGGACATGAAGACACTGAATGAAGATGGACTTTTAACATATGTAAAGTAGAT
GATAGTGCTTCTTTTATTTTATGGACATTCTAGTTTGTAACTTGTCCATTTTATTGCCTG
TATACTACCAATAAAATCTTACGAATTTCAATGT

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[558-770] 3.3E-25
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[675-778] 3.8E-27
ProSiteProfiles
RRM_dom (IPR000504) - T[686-764] 17.95
SMART
RRM_dom (IPR000504) - T[687-760] 2.3E-21
Pfam
RRM_dom (IPR000504) - T[690-758] 1.1E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRA2B_HUMAN 58.011 % 177 4.08E-54
TRA2A_HUMAN 59.615 % 174 8.63E-53
CIRBP_HUMAN 53.425 % 77 5.58E-17