Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S596142.g36257.01.t

Possible name(s)

CARMIL1; CARMIL3

Gene model

Mooccu.CG.ELv1_2.S596142.g36257

Location

S596142 [29,975 / 41,685]

Sequences

Amino acid sequence

Length: 472

>Mooccu.CG.ELv1_2.S596142.g36257.01.p
MDSDSLFYLFLFQLLSDMYGIGVEKTAGDESPLNVKLQKMAEEMDTMVEEHIKSTVVAMT
TNAGEQCPNLYKSIDEDLNRILKGKSHLPDNYVRDHVMKEAGKEINNRVSDLNLVVATII
SDKVTDALLEALSQCNISLTEKLNQQKQKGSENEKSKQAISPTHTDSDSDAVGDDTLPNI
RKQRAASIAKRKQRPTSSSVSSESDVKTEEKTIPIPELTVTHETEETEEDDLTEEKEPVY
TQIKKKPSKKESLEEKEKVEEEVVEDNKETEPEEEMVVVDGKSEGSSDEVKSRDASPLPD
LTVENSKKLDHVTKNRAKGPTARRNRGRPTKRVVKKEEEEVVDDFFSTNVANANFDNVPT
LEEEKEIAAKEKAETKKPRKMPGGMPGMPLVTPDMLKKKSSLRKGAKLEEESSKKEDEKE
NEDEEKAEEEEVKSPVAKKKPAGAMGLPGMGGMGFGGNVMAEIKLKKLNKSK

Nucleotide sequence

Length: 1,849

>Mooccu.CG.ELv1_2.S596142.g36257.01.t
TTCTGACAATTGTTATTGGCGATCTTTTAAGTATTCTTTTGTTTTGTAGCATATAATTTA
AGATTAATACAAAATGACCATCAACAAGTTTTGTTTATTTCACACGGTGGTCGACTGTAC
GTCAACGGTAAGTGTAATGTGACGTATTGCCATCGATTACAAGATAACTATCTCCTCATA
ACACAGTGATGTCAAGTTCATCATTTGTTAATAATATATCTGGCTTGTGCGATGGTGCGT
GTTAAAACCAGAAGCTTTGCATAGCCACAATGAAAAAGCATAAAACATTAGTTTTTTGTG
TATAATATTGCAGTTTGCGTACTTTGTTAGTTGTTTCAACCATTGAAACTGCGACCAATT
AAAACGTTTTGTTTACATTCTGTTAGGCAGCAAGAAGTTACTTGTTGTTTAACGGGATAT
TGTGATTGATGGATGGATAGTGACAGCCTGTTTTATTTATTTTTATTTCAGCTTCTGTCG
GACATGTACGGAATTGGTGTTGAGAAAACTGCTGGCGATGAAAGTCCGTTGAACGTGAAA
CTTCAAAAGATGGCGGAAGAGATGGACACGATGGTTGAGGAGCACATAAAAAGCACAGTA
GTAGCCATGACAACGAACGCAGGCGAACAATGTCCAAATTTGTATAAGAGTATCGACGAA
GATTTAAATCGAATTTTGAAAGGTAAAAGTCACCTGCCAGATAATTACGTTAGAGATCAC
GTGATGAAAGAAGCCGGAAAGGAAATCAACAATAGAGTGAGCGATTTGAATTTGGTGGTT
GCAACAATAATTTCTGACAAAGTGACGGACGCGCTGCTCGAAGCTTTATCGCAATGCAAC
ATATCACTGACGGAAAAGTTGAACCAACAGAAGCAAAAGGGAAGTGAAAATGAAAAATCG
AAGCAAGCCATTTCTCCCACACACACTGACTCGGATTCAGATGCAGTTGGCGACGACACT
TTACCGAATATAAGAAAGCAACGAGCAGCAAGCATTGCCAAAAGAAAACAACGACCAACG
TCATCATCTGTTTCTTCAGAATCTGACGTGAAAACGGAAGAGAAGACAATTCCCATTCCA
GAGCTGACCGTGACACATGAAACAGAGGAGACTGAAGAAGATGATTTAACCGAAGAAAAA
GAACCGGTGTATACGCAAATCAAAAAGAAACCATCCAAGAAAGAATCTTTGGAAGAAAAA
GAAAAAGTTGAAGAAGAAGTAGTTGAAGATAATAAAGAAACAGAGCCAGAGGAGGAGATG
GTGGTTGTGGATGGGAAAAGTGAAGGTTCATCAGATGAAGTGAAATCACGTGATGCTTCA
CCGCTTCCTGATCTCACAGTGGAAAATTCTAAGAAGCTTGATCATGTGACGAAGAATCGC
GCCAAAGGTCCAACTGCTCGTCGAAACCGTGGACGACCAACGAAACGTGTAGTAAAGAAA
GAAGAAGAAGAAGTGGTTGATGATTTCTTTTCAACAAATGTTGCCAATGCTAACTTTGAC
AATGTTCCAACATTAGAAGAAGAAAAGGAAATCGCTGCTAAAGAAAAGGCAGAGACAAAA
AAACCTCGTAAAATGCCTGGAGGAATGCCAGGGATGCCACTTGTCACTCCAGACATGCTG
AAGAAGAAGAGTTCATTGAGAAAAGGAGCCAAACTGGAAGAAGAATCGTCAAAGAAAGAA
GACGAAAAGGAAAATGAAGATGAAGAAAAAGCAGAGGAGGAAGAAGTAAAATCTCCCGTG
GCAAAGAAGAAGCCTGCTGGTGCTATGGGGTTGCCAGGGATGGGAGGAATGGGTTTTGGG
GGAAATGTGATGGCTGAAATAAAACTTAAAAAGTTGAACAAATCTAAAG

InterProScan

PANTHER	CARMIL1 (IPR029764) - T[158-612] 1.8E-17
Pfam	CARMIL_C (IPR031943) - T[207-525] 1.3E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CARL1_HUMAN	28.311 %	83.6	6.48E-17