- Clone 'ma193d12' >
- Clone 'mae39f12' >
- Clone 'ma217i19' >
- Clone 'cilv016e10' >
- Transcript 'Mooccu.CG.ELv1_2.S62...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S623752.g37855.01.t
Possible name(s)
HNF4A; HNF4G; RXRG
Gene model
Location
S623752 [5,086 / 15,866]
Amino acid sequence
Length: 295
>Mooccu.CG.ELv1_2.S623752.g37855.01.p
MSRQQLAAFGLASVNEATDMQQINTKKIASVNDVCDSIKQQLLVLVEWAKYIPAFSELSL
EDQVALLRAHAGEHLLLGVAKRSLPNCEVLLLGNDFIIPRKCPEVEINRVAVRVLDEIVK
PLSDMNLDANEFACLKAIVFFDPDAKGLSDPAKIKQIRSQVICNLEDYINDRQYDSRGRF
GEILLLLPTLQSITWQMVEQIQFVKIFGVVHVDSLLTEMLLGDSSDTAPELSPASVCATN
NNKSETDVSSAFMGFPTAQGSSTSTVSTMGTMPSTNFDARMEINEPIAPKVEMM*
Nucleotide sequence
Length: 1,242
>Mooccu.CG.ELv1_2.S623752.g37855.01.t
ATTTTTGATTCTTTTTGGTTTATGAGATAAACTTTCATTTTTGATGGTACCGTAACAATT
GTATATTGTATTTGTGCAGCGGTGCAGAATGAACGAGATCGTATTGCGCAACCAAGATCA
ACCACCGATGACAGCACGTCGCTATCGGTTACCACGTTGCTTAATGCAGATACAATGTCC
CGCCAGCAACTGGCTGCATTTGGATTGGCAAGTGTAAATGAAGCGACCGACATGCAACAG
ATAAACACCAAGAAAATTGCGTCAGTGAACGATGTTTGTGATTCAATAAAGCAACAATTG
CTTGTCCTTGTTGAATGGGCAAAATATATTCCTGCTTTCTCTGAACTTTCTCTTGAAGAT
CAGGTGGCGCTGTTAAGAGCACATGCAGGTGAACATTTACTACTCGGTGTTGCGAAGAGA
TCGCTTCCAAACTGTGAAGTATTGCTGTTAGGCAATGACTTCATCATACCTCGAAAATGT
CCGGAAGTTGAGATTAACCGCGTGGCAGTGAGAGTGTTGGATGAAATCGTTAAACCTTTG
AGTGACATGAACCTTGACGCAAATGAATTTGCATGCCTCAAAGCCATTGTATTCTTCGAT
CCCGATGCAAAAGGTCTTTCCGATCCTGCGAAGATAAAACAGATTCGTTCACAAGTAATT
TGTAACTTGGAAGATTATATTAACGACCGACAGTACGATTCACGTGGGAGATTTGGGGAG
ATTCTACTTCTGCTTCCGACTTTACAAAGTATCACATGGCAAATGGTGGAACAGATACAA
TTTGTCAAAATATTCGGTGTGGTTCATGTTGATAGTCTCCTCACTGAGATGCTCTTGGGA
GATTCGAGCGATACAGCGCCTGAACTCTCCCCTGCTTCAGTTTGTGCAACAAACAACAAC
AAATCAGAAACTGACGTTTCCTCGGCATTCATGGGATTCCCAACTGCTCAAGGTTCCTCT
ACATCCACCGTGTCAACTATGGGCACTATGCCAAGTACAAACTTTGATGCCCGGATGGAA
ATTAATGAACCAATTGCTCCAAAGGTTGAGATGATGTAAATTAAAGGAATGTCAAGTTAG
ATGACAATCTATGCAAGGAAGATGTTATTGTGGTTTCTCTATTTGCTGGCCGACATTACA
TTGGACTGACTCTTTAAATGCTATCATCTTAAAACTAATGCAAGTAGTTCACTCAGTTGC
AAAACAATTAATGAAGAATGTTGTTGGTCCTGTCGATTCCNN
| PRINTS |
COUP_TF (IPR003068) - T[26-38] 1.3E-7 - T[88-104] 1.3E-7 - T[199-211] 1.3E-7 - T[246-259] 1.3E-7 - T[266-277] 1.3E-7 - T[277-290] 1.3E-7 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[54-280] 1.97E-62 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[79-265] 8.8E-41 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[94-252] 8.0E-47 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[95-116] 1.1E-21 - T[116-132] 1.1E-21 - T[183-198] 1.1E-21 - T[240-257] 1.1E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RXRG_HUMAN | 40.838 % | 154 | 1.19E-43 |
| HNF4A_HUMAN | 72.414 % | 308 | 5.97E-103 |
| HNF4G_HUMAN | 71.296 % | 311 | 5.08E-105 |