- Transcript 'KH2012:KH.S555.1.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Mooccu.CG.ELv1_2.S71...' >
- Transcript 'Mooccu.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S657543.g40314.01.t
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
S657543 [8,462 / 14,209]
Amino acid sequence
Length: 598
>Mooccu.CG.ELv1_2.S657543.g40314.01.p
MIPSPSANRTPFSVKDILNLENQQQNMVVDQSSEVPSTGMMQSSPQNIDVGYNYRQQVDG
ISIGGTNPDHNVATMSGLNMAASLTNAYTNSGDVMSFNGAISIEGVEAKSKLNHSSEAVS
SLLSFSNHLQNNATEALSPEQRYQREFYESNTSDRHGVNASTHDANFGFQSGFIQSEPAN
SSTSSVLSDVSSIQQSINILPNTSPISTHSASSYPSYASSTYLPVQDNVADLDNSYPTFA
PHHPNPSSYSSFSSPSDHIDVQYNTSPGHSVDMQRQYYSVDKHSTTPLKRGSTSDVTPYS
LGGSRSGSEGNVSAFADGLNSSSSQQQFSSTSTEVSTIDNINSQTADSEKSDNVSNCSES
PTDGEKKKNEEESSKNRPRTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLAQILKL
TSTQVKIWFQNRRYKCKRQRQDKTLELAGACPPRRVAVPVLVRDGKPCLGGPGGPMGGNP
SLQVPYSAAPYNVTVTPYHSYPSSYNSCGYNSYPTHNPHANYSSTAAPYGSTQNYSHIAG
NTLGATTNAVGGMGAGLHQTGQVGMGTSPFAPAMSSQVPQRNPHAPSDYMYKLGLCT*
Nucleotide sequence
Length: 2,353
>Mooccu.CG.ELv1_2.S657543.g40314.01.t
TGACAATTTACCATTCAAGAAATAGCATCTATACACGTTGAAAACTTTTCGGATCTTTTG
AATATGATCCCGAGCCCGTCCGCAAACAGGACTCCTTTCTCTGTGAAAGATATATTGAAC
CTGGAGAATCAACAACAGAACATGGTAGTGGACCAATCATCCGAGGTACCATCGACAGGG
ATGATGCAATCTTCCCCACAGAATATCGACGTCGGATACAACTACCGACAGCAGGTTGAT
GGCATTTCGATCGGCGGAACGAACCCCGATCACAACGTTGCGACAATGTCAGGATTAAAT
ATGGCGGCATCGTTGACCAACGCATACACAAACTCCGGAGACGTGATGTCATTTAACGGA
GCGATTTCTATTGAAGGAGTCGAAGCAAAATCAAAATTGAACCACTCCAGCGAAGCGGTT
TCGTCTCTTTTGAGTTTCTCAAACCATCTACAAAACAACGCAACAGAAGCATTGTCTCCA
GAACAAAGGTATCAACGAGAATTTTATGAATCAAACACGAGTGATCGACATGGCGTTAAT
GCTTCAACCCATGACGCAAACTTTGGCTTTCAATCCGGTTTCATCCAATCCGAACCCGCA
AACAGTTCAACATCATCCGTACTTAGTGACGTCAGCAGTATCCAGCAGTCAATCAACATC
CTTCCCAATACTTCCCCAATTTCAACACACTCAGCAAGCAGTTATCCATCATATGCCTCC
TCCACATATCTCCCTGTGCAAGACAATGTGGCAGATCTGGACAATTCCTACCCCACTTTC
GCCCCACACCATCCCAATCCATCATCATATTCATCGTTTTCGTCCCCGTCCGACCACATT
GATGTCCAGTATAACACATCCCCTGGACATTCAGTGGACATGCAGCGACAGTACTACAGC
GTTGACAAACACAGCACAACACCTCTCAAACGTGGAAGCACATCCGACGTCACACCTTAC
TCTCTTGGTGGAAGCCGGAGCGGCAGTGAAGGCAACGTTTCCGCATTCGCTGACGGTTTA
AACTCGTCTTCATCACAACAACAATTTTCATCAACTTCAACAGAGGTTTCAACCATCGAC
AACATCAACAGTCAAACTGCAGACTCCGAAAAATCCGACAACGTCAGCAATTGCAGTGAA
AGTCCCACTGACGGCGAGAAAAAGAAAAACGAAGAAGAGTCGTCCAAAAACCGACCCCGG
ACGCGTAGAAAACCTAGAGTTTTATTTTCGCAAGCTCAAGTATTCGAATTGGAACGAAGA
TTTAAACAACAAAGATATCTCTCCGCCCCTGAGAGGGAACACTTGGCACAAATCCTCAAA
CTGACTTCAACGCAAGTGAAAATATGGTTCCAAAACAGACGATACAAATGTAAACGACAG
AGGCAAGATAAAACACTGGAATTGGCTGGTGCTTGTCCCCCAAGACGAGTTGCGGTTCCT
GTACTTGTCCGAGATGGAAAACCATGTCTAGGCGGACCAGGTGGTCCAATGGGTGGCAAT
CCTTCCCTACAAGTTCCCTATTCTGCAGCCCCGTACAATGTAACAGTAACTCCTTACCAC
AGCTACCCAAGCTCATATAACTCGTGTGGGTATAACTCGTACCCAACACATAATCCCCAT
GCAAACTATTCCTCCACAGCCGCACCATATGGTTCAACGCAGAACTACAGCCATATAGCC
GGTAACACTCTCGGTGCCACTACGAATGCTGTGGGAGGAATGGGAGCTGGATTGCACCAA
ACCGGTCAAGTTGGAATGGGTACATCTCCATTTGCCCCTGCCATGTCAAGTCAAGTACCC
CAGCGGAACCCACACGCGCCAAGTGATTACATGTATAAACTTGGTCTATGTACATAAGCT
GCAATAAAAAATGTGGAAATTGGTTTAAACCAATTTGCTGATTAAAAGAAGAACTACAGG
GCGGAGAGTTTCTATGCAGTACATTTGTGACAGAATACTATTTTACTATGAATTTGTCAG
TGCAATTTTGATGAGAGCGCGTGACTTGTACACAATCATTCATTCATCACAAAAGTGTTT
GTTGCTTTCCCGCCCATTTGCTCCGAAGTGTCCATGACAATAATTAAACCGTGTCCGATT
GTTGTAAATATTTATCTCCTCGATCAGCAACTATATTTATTGCAATTTCATATTTGGGTG
GACTAACACAATTTACATGACATTATCACAGACGTTGACCGTCGATAACTTCTACAGTTC
ATTACTTTCTTCTGCTATAACACACCGGTGAACTTTGAATCACTCTCCTGCCCGACATTT
GATCGCACTTTTCATATTATCTATCATCTTGCGCTCAAAATGTTATTTAAATTTTATAAG
TTGTCTTTTTTTG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[394-461] 1.24E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[400-460] 20.309 |
| SMART |
Homeobox_dom (IPR001356) - T[402-464] 4.0E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[403-459] 1.9E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[403-461] 1.24082E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[424-435] 2.0E-5 - T[439-449] 2.0E-5 - T[449-458] 2.0E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[435-458] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 72.519 % | 184 | 1.68E-53 |
| NKX25_HUMAN | 59.477 % | 164 | 6.51E-46 |
| NKX23_HUMAN | 60.116 % | 168 | 5.86E-47 |