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  1. Transcript 'Mooccu.CG.ELv1_2.S65...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S657543.g40314.01.t

Possible name(s)

NKX2-3; NKX2-5; NKX2-6

Location

S657543 [8,462 / 14,209]

Sequences

Amino acid sequence

Length: 598

>Mooccu.CG.ELv1_2.S657543.g40314.01.p
MIPSPSANRTPFSVKDILNLENQQQNMVVDQSSEVPSTGMMQSSPQNIDVGYNYRQQVDG
ISIGGTNPDHNVATMSGLNMAASLTNAYTNSGDVMSFNGAISIEGVEAKSKLNHSSEAVS
SLLSFSNHLQNNATEALSPEQRYQREFYESNTSDRHGVNASTHDANFGFQSGFIQSEPAN
SSTSSVLSDVSSIQQSINILPNTSPISTHSASSYPSYASSTYLPVQDNVADLDNSYPTFA
PHHPNPSSYSSFSSPSDHIDVQYNTSPGHSVDMQRQYYSVDKHSTTPLKRGSTSDVTPYS
LGGSRSGSEGNVSAFADGLNSSSSQQQFSSTSTEVSTIDNINSQTADSEKSDNVSNCSES
PTDGEKKKNEEESSKNRPRTRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLAQILKL
TSTQVKIWFQNRRYKCKRQRQDKTLELAGACPPRRVAVPVLVRDGKPCLGGPGGPMGGNP
SLQVPYSAAPYNVTVTPYHSYPSSYNSCGYNSYPTHNPHANYSSTAAPYGSTQNYSHIAG
NTLGATTNAVGGMGAGLHQTGQVGMGTSPFAPAMSSQVPQRNPHAPSDYMYKLGLCT*

Nucleotide sequence

Length: 2,353

>Mooccu.CG.ELv1_2.S657543.g40314.01.t
TGACAATTTACCATTCAAGAAATAGCATCTATACACGTTGAAAACTTTTCGGATCTTTTG
AATATGATCCCGAGCCCGTCCGCAAACAGGACTCCTTTCTCTGTGAAAGATATATTGAAC
CTGGAGAATCAACAACAGAACATGGTAGTGGACCAATCATCCGAGGTACCATCGACAGGG
ATGATGCAATCTTCCCCACAGAATATCGACGTCGGATACAACTACCGACAGCAGGTTGAT
GGCATTTCGATCGGCGGAACGAACCCCGATCACAACGTTGCGACAATGTCAGGATTAAAT
ATGGCGGCATCGTTGACCAACGCATACACAAACTCCGGAGACGTGATGTCATTTAACGGA
GCGATTTCTATTGAAGGAGTCGAAGCAAAATCAAAATTGAACCACTCCAGCGAAGCGGTT
TCGTCTCTTTTGAGTTTCTCAAACCATCTACAAAACAACGCAACAGAAGCATTGTCTCCA
GAACAAAGGTATCAACGAGAATTTTATGAATCAAACACGAGTGATCGACATGGCGTTAAT
GCTTCAACCCATGACGCAAACTTTGGCTTTCAATCCGGTTTCATCCAATCCGAACCCGCA
AACAGTTCAACATCATCCGTACTTAGTGACGTCAGCAGTATCCAGCAGTCAATCAACATC
CTTCCCAATACTTCCCCAATTTCAACACACTCAGCAAGCAGTTATCCATCATATGCCTCC
TCCACATATCTCCCTGTGCAAGACAATGTGGCAGATCTGGACAATTCCTACCCCACTTTC
GCCCCACACCATCCCAATCCATCATCATATTCATCGTTTTCGTCCCCGTCCGACCACATT
GATGTCCAGTATAACACATCCCCTGGACATTCAGTGGACATGCAGCGACAGTACTACAGC
GTTGACAAACACAGCACAACACCTCTCAAACGTGGAAGCACATCCGACGTCACACCTTAC
TCTCTTGGTGGAAGCCGGAGCGGCAGTGAAGGCAACGTTTCCGCATTCGCTGACGGTTTA
AACTCGTCTTCATCACAACAACAATTTTCATCAACTTCAACAGAGGTTTCAACCATCGAC
AACATCAACAGTCAAACTGCAGACTCCGAAAAATCCGACAACGTCAGCAATTGCAGTGAA
AGTCCCACTGACGGCGAGAAAAAGAAAAACGAAGAAGAGTCGTCCAAAAACCGACCCCGG
ACGCGTAGAAAACCTAGAGTTTTATTTTCGCAAGCTCAAGTATTCGAATTGGAACGAAGA
TTTAAACAACAAAGATATCTCTCCGCCCCTGAGAGGGAACACTTGGCACAAATCCTCAAA
CTGACTTCAACGCAAGTGAAAATATGGTTCCAAAACAGACGATACAAATGTAAACGACAG
AGGCAAGATAAAACACTGGAATTGGCTGGTGCTTGTCCCCCAAGACGAGTTGCGGTTCCT
GTACTTGTCCGAGATGGAAAACCATGTCTAGGCGGACCAGGTGGTCCAATGGGTGGCAAT
CCTTCCCTACAAGTTCCCTATTCTGCAGCCCCGTACAATGTAACAGTAACTCCTTACCAC
AGCTACCCAAGCTCATATAACTCGTGTGGGTATAACTCGTACCCAACACATAATCCCCAT
GCAAACTATTCCTCCACAGCCGCACCATATGGTTCAACGCAGAACTACAGCCATATAGCC
GGTAACACTCTCGGTGCCACTACGAATGCTGTGGGAGGAATGGGAGCTGGATTGCACCAA
ACCGGTCAAGTTGGAATGGGTACATCTCCATTTGCCCCTGCCATGTCAAGTCAAGTACCC
CAGCGGAACCCACACGCGCCAAGTGATTACATGTATAAACTTGGTCTATGTACATAAGCT
GCAATAAAAAATGTGGAAATTGGTTTAAACCAATTTGCTGATTAAAAGAAGAACTACAGG
GCGGAGAGTTTCTATGCAGTACATTTGTGACAGAATACTATTTTACTATGAATTTGTCAG
TGCAATTTTGATGAGAGCGCGTGACTTGTACACAATCATTCATTCATCACAAAAGTGTTT
GTTGCTTTCCCGCCCATTTGCTCCGAAGTGTCCATGACAATAATTAAACCGTGTCCGATT
GTTGTAAATATTTATCTCCTCGATCAGCAACTATATTTATTGCAATTTCATATTTGGGTG
GACTAACACAATTTACATGACATTATCACAGACGTTGACCGTCGATAACTTCTACAGTTC
ATTACTTTCTTCTGCTATAACACACCGGTGAACTTTGAATCACTCTCCTGCCCGACATTT
GATCGCACTTTTCATATTATCTATCATCTTGCGCTCAAAATGTTATTTAAATTTTATAAG
TTGTCTTTTTTTG

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[394-461] 1.24E-22
ProSiteProfiles
Homeobox_dom (IPR001356) - T[400-460] 20.309
SMART
Homeobox_dom (IPR001356) - T[402-464] 4.0E-24
Pfam
Homeobox_dom (IPR001356) - T[403-459] 1.9E-19
CDD
Homeobox_dom (IPR001356) - T[403-461] 1.24082E-23
PRINTS
Homeobox_metazoa (IPR020479) - T[424-435] 2.0E-5 - T[439-449] 2.0E-5 - T[449-458] 2.0E-5
ProSitePatterns
Homeobox_CS (IPR017970) - T[435-458] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NKX26_HUMAN 72.519 % 184 1.68E-53
NKX25_HUMAN 59.477 % 164 6.51E-46
NKX23_HUMAN 60.116 % 168 5.86E-47