- Clone 'ciht029a20' >
- Transcript 'Mooccu.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S658591.g40407.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S658591 [1,482 / 3,449]
Amino acid sequence
Length: 214
>Mooccu.CG.ELv1_2.S658591.g40407.01.p
MFIRVWLLVLAGVVCHSLTFERYGRNESNFHNEFLKNYYTYNGHQNFFPSDLRTMKDAAR
RMFQFGYDNYMKYAYPMDELDPIHCTGRGPDIEDPSNININDVLGNFSLTLVDSLDTLAI
MGNASEFKSAVQLVIDNVHFDKNTTVQVFETNIRVLGSLLSAHLIITNPKQPFGDMRLRN
YNNELLSLAHDVAVRLLPAFDETPSGIPYPRVKL
Nucleotide sequence
Length: 903
>Mooccu.CG.ELv1_2.S658591.g40407.01.t
CCATCCATTTTCGCCCACAGCCAACTGGCCAAGGAGCGGTTGACCCGATAACAATTTGTG
TTTTTTCACCGCTGCCTCTCTGCCTGTTCTCAATTCTCTATCTTACTTATTTTAGATCTC
ACTGCACTGTCCACTGACTATAAATTTTAAAAAATGTAATTTTTATAAATTTATGATCTT
TTTATCTCTGGTGGATGGCACTGAATGGCTTGAAATAGACAGAAAGGATGGGAAATTATT
TGATATTGCTTCATAAAGAAAATGTTTATTCGAGTTTGGTTACTGGTGTTAGCAGGTGTT
GTCTGCCACTCGCTAACCTTTGAAAGATATGGAAGAAATGAAAGTAATTTCCACAATGAA
TTTTTGAAAAACTATTACACTTATAATGGTCATCAAAACTTTTTCCCAAGTGATTTACGC
ACAATGAAAGATGCGGCACGACGGATGTTTCAATTTGGTTATGACAACTATATGAAGTAC
GCTTATCCAATGGATGAACTTGATCCAATACATTGCACAGGAAGAGGACCTGATATTGAA
GATCCATCCAATATTAATATAAATGACGTATTGGGTAACTTTTCATTAACTCTTGTGGAT
TCTCTGGACACTCTTGCGATTATGGGAAATGCAAGTGAATTTAAATCGGCTGTGCAGCTC
GTCATCGATAATGTTCATTTTGATAAGAATACAACTGTACAAGTCTTTGAAACTAATATA
AGAGTTCTTGGTTCATTACTTTCCGCACATTTGATAATAACAAATCCAAAGCAACCGTTT
GGTGACATGCGACTGAGGAACTACAATAACGAATTGTTATCACTGGCACACGATGTCGCG
GTTCGTTTGTTGCCAGCGTTTGATGAAACTCCGAGCGGCATTCCGTATCCACGGGTAAAA
CTT
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[131-301] 1.1E-51 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[141-300] 6.15E-50 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[149-301] 3.4E-41 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[149-169] 2.0E-27 - T[195-209] 2.0E-27 - T[232-250] 2.0E-27 - T[286-301] 2.0E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 48.052 % | 131 | 2.19E-35 |
| EDEM2_HUMAN | 42.767 % | 121 | 5.25E-32 |
| EDEM1_HUMAN | 72.619 % | 254 | 2.59E-81 |