- Clone 'AHC0AAA54YI23' >
- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'Mooccu.CG.ELv1_2.S67...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S676623.g42031.01.t
Possible name(s)
CCT8; CCT8L2; TCP1
Gene model
Location
S676623 [11,741 / 14,232]
Amino acid sequence
Length: 330
>Mooccu.CG.ELv1_2.S676623.g42031.01.p
MNKMVINHIEKLFVTNDAATIMKELEVAHPAAKMLVLASQMCEQEVGDATNFVVMLAGSL
LKHAEELLRMGLSIPEVVEGYEQAGAKALEILEDLVVRKIEDLRDVSQVVESMKGCVASK
QYGNEEFLTDLVAKACVSILPKDSIRFNVDNIRVIKILGGGIYASSLVRGMMFKREVEGN
ITRVENANIAVFSCPFDMLNTETKGTVLIKNAEELKNFSKGEENLLEKQVKEIADAGINV
VVSGGKVSDLGLHYAEKYKLLVVRLNSKWDLRRLCRTVRATALPRLTAPTKEETGHCSLV
RLDDISDTNVVIFEHADAEDSSVCTIALKS
Nucleotide sequence
Length: 1,409
>Mooccu.CG.ELv1_2.S676623.g42031.01.t
CGCCTCAATACATTTCATAAATTTCTTCATCCGCTAGATGTCTGTAAAGATTCTAGAATA
TTCCGCATGTTTCTCGACTGGCAGTTATTTCAAAATCCAAATCATTCGTAATTTATTTCT
CGACCGAGTGTTTGTGCATTGTTTATAAATTAAAATGGCGTTTCATGTTCCAAAAGCGCC
TGGTTTTCAACAAATGCTCAAGGATGGGGCTAAGCATTATCATGGAATGGAAGAAGCAGT
TTACCGAAACATCAACGCATGCAAAGAATTATCGAAAACGGTTCAATCTGCGTTTGGTCC
TCAAATAACTAAGTCTATATGACTTAACTATAAATTGATACACAAAATAAACTCAAAATT
TATTGNNNNNNNNNNGAATTATCGAAAACGGTTCAATCTGCGTTTGGTCCTCATGGGATG
AATAAAATGGTTATTAATCACATCGAAAAACTATTTGTCACCAACGATGCCGCTACGATA
ATGAAAGAACTTGAAGTTGCTCATCCCGCTGCAAAAATGTTGGTTTTGGCTTCACAAATG
TGCGAGCAGGAAGTTGGAGATGCCACAAATTTTGTTGTAATGTTGGCAGGATCTTTGTTG
AAACACGCAGAAGAACTTTTAAGAATGGGATTATCGATTCCTGAAGTTGTTGAAGGTTAT
GAACAAGCAGGAGCAAAAGCTCTTGAAATATTGGAAGATTTGGTTGTTCGTAAAATTGAA
GACCTTCGTGATGTGTCGCAAGTTGTTGAATCTATGAAGGGATGTGTTGCCAGCAAACAG
TATGGAAATGAAGAATTCCTCACAGATCTCGTTGCTAAAGCTTGTGTGTCAATCCTTCCA
AAAGATTCGATCAGATTTAATGTTGATAACATTCGAGTGATAAAAATTCTCGGAGGCGGA
ATATACGCATCCAGTTTGGTTCGTGGAATGATGTTCAAACGGGAAGTTGAGGGAAATATT
ACACGAGTTGAAAATGCAAATATCGCTGTTTTCTCATGTCCATTTGATATGCTCAACACC
GAGACCAAAGGAACAGTTTTAATTAAAAACGCAGAAGAATTAAAAAATTTTAGTAAAGGA
GAGGAAAATCTTCTTGAAAAGCAAGTGAAAGAAATTGCGGATGCTGGTATCAATGTTGTT
GTATCTGGTGGTAAAGTAAGCGATCTCGGATTGCACTACGCCGAAAAGTACAAACTGCTC
GTTGTTAGACTCAATTCAAAATGGGACCTGCGAAGATTATGCAGAACTGTTAGAGCAACA
GCTCTACCACGACTGACTGCACCAACAAAGGAAGAAACTGGTCATTGTTCTCTTGTCCGA
CTGGATGATATCAGTGATACAAATGTTGTGATCTTTGAACATGCCGATGCTGAGGATAGT
TCCGTCTGTACCATCGCACTAAAGTCGGC
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[102-273] 6.0E-43 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[117-238] 1.31E-36 - T[378-388] 1.31E-36 |
| TIGRFAM |
Chap_CCT_theta (IPR012721) - T[124-469] 1.9E-147 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[125-468] 8.9E-158 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[127-468] 2.6E-94 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[129-145] 4.3E-11 - T[151-169] 4.3E-11 - T[181-200] 4.3E-11 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[153-169] . |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[245-309] 7.63E-10 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[304-468] 1.36E-38 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[309-459] 2.8E-61 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPQ_HUMAN | 65.152 % | 400 | 2.0E-137 |
| TCPQM_HUMAN | 31.529 % | 149 | 1.25E-40 |
| TCPQL_HUMAN | 31.529 % | 150 | 2.49E-41 |