- Transcript 'KH2012:KH.C5.396.v1....' >
- Transcript 'KH2012:KH.L112.2.v4....' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Mooccu.CG.ELv1_2.S68...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S685088.g42899.02.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
S685088 [16,359 / 19,763]
Amino acid sequence
Length: 366
>Mooccu.CG.ELv1_2.S685088.g42899.02.p
MLGYEGATEYVHSGRFGPGEGPIWLDNVQCEGEEKSILSCSLKPFGDHDCEHHEDAGVKC
IPRRIPQYLVDSWKHREDTIDLVRLQPPRGQGKQVPQTQGFVEMFYQEKWRKVCHTDAWG
IAASRVICGQLGFPDATSVPNLDSYMRNAKKKHNYWLTNVRCYGNESIIDDCKYTKTNVS
LYNNCPTRPVVVKCLPGEIYSHGGFKKMKNRLRKKNKLHRTVVGSMSQINSFTRVYHSLI
LQMEPTIRLRGGAMHGEGRLQVIRNGRWGAVCQDGFDLNSANVACRQLGFGTAKRYYLDS
HFGVGHGPIWINNVHCIGSEYRIEDCLYDQIQPEYTGYETVHNDQCTHYEEIGVACYTPD
VGTKKK
Nucleotide sequence
Length: 1,614
>Mooccu.CG.ELv1_2.S685088.g42899.02.t
CGCTTGGTATATTTTAGTACCTTATAATCTCTTCAGTCAAGTGGAACCAGACGAATTTCC
GCAAATCTTTTTGTCTAAGTTTAAAGTATAATGCGTTTCTTTCTTCAGTCGTAGTCAACA
AAATATAATTTTGGTTAGCATAGTTTTTACAGACATAAACGGAAATCAGTCAACGTTCCA
GCATACGCGTTGCACTCCAGTCCGATTTAACCTGCCAAAGTTAGTCGATTGCATATACAA
CATGGCGATAAGGAAGATTGGAATTAGCACTTTGTGCTTTATATCTTTATCATTAGTTAC
TTACTGCAGTGCAGTTAGCAGTGAAGATCGCGACGAATTTATGGTACGCGAAAATTAAAT
TGATTGTAAAATTTTTGTTCCAAAACTGAAATTTAGATTCGTTTACGAGACGGGGACAAG
CCATCGGAAGGAAGAGTGGAAATTTTTCACGATGGTGAATGGGGGACGATATGTGATGAT
GACTGGAGCATAGAAGCTGCCACGATCGTCTGCCACATGTTGGGATACGAAGGAGCAACG
GAATATGTGCACAGTGGAAGATTTGGACCGGGAGAAGGTCCAATTTGGCTCGACAATGTT
CAATGTGAGGGTGAGGAGAAATCGATTCTATCCTGCTCTTTGAAACCGTTTGGTGATCAT
GATTGCGAACATCATGAAGACGCCGGTGTTAAATGCATTCCCAGAAGAATACCACAATAC
CTTGTTGACTCATGGAAACACAGGGAGGATACCATTGACTTGGTTCGTCTTCAGCCTCCT
CGTGGACAAGGGAAACAAGTTCCACAGACCCAAGGATTTGTTGAGATGTTCTACCAAGAA
AAGTGGAGGAAAGTGTGTCACACAGATGCTTGGGGTATTGCTGCTTCACGTGTAATATGT
GGACAACTGGGCTTTCCTGATGCAACCTCAGTTCCTAACTTAGACAGCTACATGCGCAAT
GCCAAAAAGAAACACAACTATTGGCTAACGAATGTGAGGTGCTATGGCAACGAAAGCATC
ATTGATGATTGCAAATACACAAAAACAAATGTTTCTTTGTATAACAACTGCCCCACTCGA
CCAGTTGTTGTCAAATGTCTTCCCGGAGAGATTTATTCACATGGAGGATTCAAAAAGATG
AAAAATCGTCTGCGAAAGAAAAATAAACTCCACAGAACAGTGGTGGGTTCAATGTCACAA
ATAAATTCATTTACCCGAGTCTATCATTCTCTTATACTTCAGATGGAGCCTACAATCCGT
CTTCGTGGAGGGGCCATGCATGGAGAAGGTCGGCTTCAAGTGATACGGAATGGAAGGTGG
GGCGCTGTGTGTCAGGATGGATTCGATCTAAACTCAGCAAACGTTGCCTGCAGACAACTT
GGTTTCGGCACAGCAAAGCGTTATTACTTGGACTCACACTTTGGTGTCGGGCACGGACCG
ATATGGATTAACAATGTACATTGTATTGGCAGCGAATATAGAATAGAAGATTGTTTGTAT
GATCAAATACAACCTGAATATACGGGTTATGAAACTGTCCATAATGATCAATGCACGCAT
TATGAGGAGATAGGGGTGGCTTGTTATACCCCTGATGTTGGAACTAAGAAAAAG
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[131-236] 2.22E-38 - T[269-368] 4.45E-21 - T[418-531] 1.05E-30 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[131-239] 2.9E-40 - T[253-371] 1.1E-20 - T[413-535] 2.7E-33 |
| PRINTS |
SRCR (IPR001190) - T[133-149] 1.6E-19 - T[152-163] 1.6E-19 - T[167-177] 1.6E-19 - T[198-212] 1.6E-19 - T[221-233] 1.6E-19 |
| SMART |
SRCR-like_dom (IPR017448) - T[133-233] 8.3E-53 - T[255-367] 3.9E-18 - T[419-529] 1.5E-36 |
| ProSiteProfiles |
SRCR (IPR001190) - T[133-233] 31.448 - T[255-367] 16.815 - T[419-529] 26.836 |
| Pfam |
SRCR (IPR001190) - T[137-232] 4.3E-30 - T[269-366] 1.1E-18 - T[423-528] 6.7E-22 |
| ProSitePatterns |
SRCR (IPR001190) - T[138-175] . - T[424-461] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 34.392 % | 219 | 9.61E-65 |
| LOXL3_HUMAN | 31.806 % | 199 | 1.27E-57 |
| LOXL4_HUMAN | 34.715 % | 202 | 8.38E-59 |