- Transcript 'KH2012:KH.C8.163.v4....' >
- Transcript 'KH2012:KH.L95.1.v1.A...' >
- Transcript 'Mooccu.CG.ELv1_2.S71...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S716823.g46618.01.t
Possible name(s)
TBR1; TBX1; TBX21
Gene model
Location
S716823 [21,111 / 26,103]
Amino acid sequence
Length: 497
>Mooccu.CG.ELv1_2.S716823.g46618.01.p
MFQLSLKSLHKYQPRLHVVEVNPRDPTVQSNLRTFIVPKTAFMTVTLYHNTDVAQLKINL
NPFARCFRDKELPDRSPSAHSPNDLKLHSPYSSSPSSGGSGTPSPNQAIQSSSKEPLDGA
VIYKVSNPVSGDKLNQAKDFMQTQIRTMSELVQCQNLRGGNETSLPVTSSAVTSVGITMP
PFNRELEDLLSNVESGTIPGSADNNDENIDELKRLLADTNDSNITKVGTVHHKPLNGEEV
KKTNTTTITKQDSKETYELSQVDRVFPPNAVAPVSTQLPFNPDDVKHSSERASKEPLPAF
FECTYYREQAAQAQLEKNTKEDSKQENPVVYIPTSNSATSNEETANATEQNLPEEEVQPS
LNHNSPSPIKEFNSPEFATTTRITEVIESHSYEPDSNQHSPLPQGVSMGSNFVGHIQQNV
NIGDPASNMFSFPLPALSPGELTDFLGSDEMSSGNKRKFSYDDDDDVFIVSDNLPMHNNY
LTTVTKRQCIAANGLM*
Nucleotide sequence
Length: 3,144
>Mooccu.CG.ELv1_2.S716823.g46618.01.t
CTTATTTATCGTCTTAATACTTAAACTTTTTGCAGTTAGTTCTTATATTTTCTTTAGTAT
TCCTTTGTTTCAAATTTCTTTCAATATTATTTTTTTTTCAAATGAGAAATGTCGTTCGGT
GGTGCAACGTACAACGGTATGATGAATTACCAACAACCAATGCACCGTACTGGTGTATAC
CAGCCACAACAGATGTATCACAACCCCATACATGTACAACAACAATACCCAAACATCCAA
CAATCATACATTATGAAGGGCAATATGGGTCAGCAACATGGGTACCCTCACCCCAAACAA
CAATATTCAACCAATTATCCCGCAGGAATGTCTCAACATCAACGACCCATGTATAATCAC
ACTCAAATGTATTCTGACCCCAATGCAAATGCCCCCGACATGATCCGCACCCAGCGACCC
CAAACACGATGGCATATGAACCCACAAGCAAACTATAATTCTGGTTACTCACAGTCACAA
AATGCGAATGTTTGCCAAACGAGTCCAAATCTTTCACCAGTGAACAATTCCATGCAACAG
CATCAGCAAATCCCCATTTCAAACGCACAACATCCAATGCATCCTTACCAACAAGTACAA
AACAGAAGAAGAATGTCTTCTTCTTCGCAACACTCAGATTACAGCACATCAAGTGGAATA
TCTTCCAACAGGAATGAGGGGAATTGGCAAGCACCAACTTTAAACCCAACACCACCCTTG
AAACAATCCACAACGCCCAGATACATTCCAGCCAATCAGGACGCAGACAGCCTCCCTTCC
TCACAAATTTCACCCAATCCTATTCCAGTAAACAGCCAATGGGAGGGTAATAATACTTAT
AGTTCCATGGTTTCTCCTGCGTCCAATATCTCAAGTGAGAATTCACCAACAAGCACCTTC
CAACAGCCCATGCGTCCATTCGATGCTGTACAATTTCGACAACCACGTCCACCACCACTC
ATGGCTGGAATTCCTCTGCAACAGCTTCCTCCTTCGGGATACATGGGTCACATACCTGGG
GCAGTAGCAGGAACCAAGGGTAATGACTGGGAGGTTGAGTGTATGGGGGCAAATGCCAAA
CTGAGAAATTATGAACTTTGGAAACATTTTGATAATGTTGTCATGGAGATGGTGATCAGC
AAACATGGAAGACGGATGTTTCCTGTATTAGAATATGATTTGACCGGTCTTCACCCTCAG
AAGTTATACAGCGTGTTTGTTGACTTCGTCCTATGCAGTAATTACGTTTGGAAATTTGTT
GAGCAGAAATGGCAAGCATCTGGTCTGGCACCTTTGGATGAGGACGCATTTGAGCGGAAC
CATAGGATTTGTGTTCATCCAGACTCTCCTGCTCCTGGTGATGTGTGGAATAAGAGAGGA
GTCACTTTCTCAAAGATGAAATTAAGCAATCATCTTCATTCAGATGGAGACAAGGTTTGA
TTGATCAGCCCAAGCCTTGTTACTGACCACAGCACCATGTTTCAGCTTTCATTGAAGTCC
CTCCACAAATACCAACCACGACTGCACGTTGTTGAAGTGAACCCACGTGACCCGACCGTA
CAAAGCAACTTGCGCACTTTCATTGTTCCAAAGACAGCATTTATGACAGTGACATTGTAC
CATAACACAGATGTGGCGCAGTTAAAGATCAACTTGAATCCGTTCGCAAGATGTTTCCGA
GACAAAGAATTGCCAGATCGCTCACCTTCTGCGCATTCACCAAACGACTTGAAATTACAT
TCGCCTTACTCTTCGTCACCCTCTAGTGGGGGATCTGGAACACCTTCACCAAATCAAGCC
ATTCAAAGTTCAAGCAAGGAACCGCTAGATGGTGCTGTGATATACAAAGTATCAAATCCT
GTATCTGGCGACAAATTAAACCAAGCGAAAGATTTCATGCAAACGCAAATAAGAACAATG
TCCGAGCTAGTCCAGTGTCAAAATCTCCGTGGCGGCAATGAAACGTCATTGCCTGTTACA
TCATCAGCCGTGACGTCAGTGGGTATAACCATGCCACCGTTCAATCGCGAACTTGAAGAT
CTTTTAAGCAATGTTGAAAGTGGAACGATTCCTGGCAGCGCTGACAATAATGATGAAAAT
ATAGACGAATTAAAGCGACTTCTAGCGGATACAAATGATTCTAATATCACAAAAGTTGGT
ACTGTGCATCACAAACCTTTAAATGGTGAAGAGGTGAAGAAAACGAACACGACGACAATT
ACAAAACAAGATTCAAAGGAGACGTACGAATTATCTCAAGTCGATCGTGTTTTCCCGCCA
AACGCAGTAGCTCCCGTCAGTACGCAACTTCCTTTCAACCCGGATGACGTGAAGCACTCA
TCTGAACGCGCCTCGAAAGAACCGCTTCCCGCCTTTTTTGAATGTACGTACTACAGAGAG
CAGGCAGCCCAAGCTCAACTGGAGAAGAATACTAAAGAAGATTCAAAGCAAGAGAATCCT
GTTGTGTACATTCCCACATCGAATTCGGCAACTTCCAATGAAGAAACAGCGAATGCAACT
GAACAAAATCTACCAGAAGAAGAAGTTCAGCCATCACTCAACCATAATTCGCCTTCGCCA
ATCAAAGAATTCAATTCACCGGAATTTGCAACTACGACAAGAATAACAGAAGTTATTGAA
TCTCACTCGTACGAACCCGACAGCAACCAACATTCGCCTTTACCGCAAGGTGTCAGTATG
GGGTCAAACTTTGTTGGTCATATTCAACAAAATGTAAACATCGGCGACCCAGCATCGAAT
ATGTTTTCATTTCCGCTACCGGCGTTGTCGCCAGGCGAACTTACAGATTTTCTCGGAAGT
GACGAAATGTCGTCAGGAAACAAACGGAAATTTTCATACGATGACGATGATGACGTATTC
ATCGTGAGCGACAACTTGCCCATGCATAACAATTACTTGACAACTGTTACTAAGCGACAA
TGTATCGCTGCAAACGGTCTTATGTGACATCACTAATGTAAATTTACGGCTCACTGCACA
AATGTTCTCACATGGCATGCTGGCGATAGCAAATGGTCAGCTATCGTCCAAATGTCCTCC
ACAAGTTTCACTTCTACAGTGTTTTTATTATATTTTATGCATCCATCCAATTGTCATATT
ACTTTTATATAATTACGTTGTTGC
| PANTHER |
TF_T-box (IPR001699) - T[136-279] 2.2E-63 - T[303-870] 2.2E-63 |
| Gene3D |
T-box_sf (IPR036960) - T[348-562] 1.1E-58 |
| SMART |
TF_T-box (IPR001699) - T[356-566] 3.9E-57 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[358-561] 1.99E-56 |
| Pfam |
TF_T-box (IPR001699) - T[360-561] 2.4E-54 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[361-561] 56.095 |
| PRINTS |
TF_T-box (IPR001699) - T[374-398] 2.7E-13 - T[444-457] 2.7E-13 - T[553-561] 2.7E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBR1_HUMAN | 58.209 % | 81.6 | 2.55E-16 |