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TRANSCRIPT CARD

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  1. Molecular Tool 'Cirobu.Tbx6-r.b>Moocci.Lhx3/4.a' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S71...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S718403.g46839.01.t

Possible name(s)

AP1G1; AP3D1; AP4E1

Gene model

Mooccu.CG.ELv1_2.S718403.g46839

Location

S718403 [29,908 / 33,537]

Sequences

Amino acid sequence

Length: 501

>Mooccu.CG.ELv1_2.S718403.g46839.01.p
MMSKIMGRTLQHAVGYLQRKVPEYSIYAEIKDMLHNLSNETQTKSKEHEILQNCLKTLKQ
RLSSGGVGIDEKRFCVMTLLFISNYKIKTNELHHFVIQFIEQSKNIADKKLGYIAMSVLI
EKDDSCLYLIINTLLKDINCSDTHVIFAALTTLSNIIVVDLIPVFLPSMEKRLKHPHSDI
RQQVLSVYHKMFQVGPEFIRKQMPGIIHQTFRDKNPCVMAATLPLIESTLKADGIVLTHI
TDNLVFILSQVEAGCLPLHMMYKGISGPWIQLRILNILKQIYDTFNDQSTAKVVEVVEKI
FNRIQVLSGRIHVAIFVECVALVSVMQPSLKCKLESCSQCITTLILSGKANLIHTGLLCL
IKISEVDVKFAAEHRDKIMDCLKSKDESIRKMALKMVTTLTTEANVKAICVHLCGQMAAE
DSSFKSYILRIVLTLAKKYPPDDDWMLQQLHDVAKTTKMTDVDGETVLRELISCMKKATG
EIQQMEISWCLNELNEVSSVX

Nucleotide sequence

Length: 1,965

>Mooccu.CG.ELv1_2.S718403.g46839.01.t
NNGAAATATCTTTTGTTTACCTTTAAAATCTTATAATTTATCTTGACTTGTCAGTCCTGA
TATGCGTAGCAACAAATACCCATTTCATTTAAATTATATTTGCAATTAAAAAAACTGATA
ATAAAATTTCATAATCCGTTCCCGTAGCAAATCTATCCACTACATCTTGATTGCTCCTTA
TCCTCATATAACATTAATAGTAGAGTTTTCAATGTTACTAATTATTAATTCAACATTGAA
GGTGATTTTTCCTGTTTTGCCAGTATTATTACTTACATTTAAGTGCTGTATCATTGCTCT
GCCTATTTGTGACgaacttcttacatgttttactgtttttatatcactgcatttTCTGTT
TACTGAAGCTTTGCCAACATTTTTTTTTCATTAAACCATAGAAATTTTTAAAAGTGTTTG
TTTTTTACTAGAATTTGACTTATTGTAGTTATTACTGGCAAGATGATGTCGAAAATCATG
GGTCGGACGTTGCAACATGCTGTGGGATATTTACAGAGGAAAGTACCTGAATATAGCATC
TATGCCGAGATTAAAGACATGTTGCATAATTTATCAAATGAAACACAAACAAAATCAAAG
GAGCATGAGATTTTACAAAACTGCTTAAAAACATTAAAACAAAGATTATCATCAGGCGGC
GTTGGAATAGACGAGAAAAGGTTTTGCGTAATGACTTTACTCTTCATTTCAAATTACAAG
ATAAAAACAAACGAACTACATCATTTTGTAATACAATTTATTGAACAATCCAAAAATATT
GCTGATAAAAAATTGGGCTACATTGCAATGAGTGTTTTAATTGAGAAAGATGACTCGTGC
CTCTATTTAATCATCAACACATTATTGAAAGACATAAACTGCAGTGATACCCACGTCATA
TTTGCTGCTCTAACGACATTATCCAATATTATTGTGGTTGATTTGATTCCTGTGTTTCTA
CCATCAATGGAAAAGAGATTGAAGCATCCCCATTCTGATATTCGGCAGCAAGTTTTGAGC
GTTTATCATAAAATGTTTCAAGTTGGTCCGGAGTTCATTCGCAAGCAGATGCCAGGTATA
ATTCATCAAACCTTTCGTGATAAAAACCCGTGTGTCATGGCTGCAACATTACCACTCATT
GAATCCACTCTAAAGGCAGATGGCATTGTGCTTACACACATCACGGATAATTTGGTTTTC
ATACTCAGTCAagttgaagcaggatgtcttcctcttcatatgatgtataaagGCATCAGT
GGACCATGGATTCAACTTCGTATTCTTAACATTTTGAAGCAGATTTACGACACTTTCAAT
GATCAATCGACTGCCAAAGTAGTTGAAGTTGTCGAAAAAATCTTTAACAGAATTCAGGTG
TTATCTGGTCGCATTCATGTTGCGATATTTGTCGAATGTGTTGCCTTGGTTTCCGTGATG
CAACCAAGTCTTAAATGCAAACTCGAAAGTTGCTCACAATGCATCACAACACTAATACTA
TCAGGGAAGGCCAATctcatacatacaggtcttctctgtctaataaaaatatcagaggtt
gatgtaaaatttgccgcggaacatagagacaaaattatggattgtttaaaaagcaaagat
gaaagcattaggaaaatgGCATTGAAAATGGTAACAACATTAACTACGGAAGCAAAtgta
aaagccatttgtgttcatttatgtggtcaaatggcagccgaagattcctcatttaaatca
tatattcttcgaattgttttgactcttgcgaagaaatatcctcctgatgatgactggatg
ttgcaacaacttcatgatgtggcgaagacaacaaagatgacagatgttgatggagaaact
gttcttcgtgaactcatctcatgcatgaagaaagCAACAGGTGAAATACAGCAAATGGAG
ATTAGTTGGTGTTTGAATGAACTTAATGAAGTCTCATCAGTTCNN

InterProScan

Gene3D
ARM-like (IPR011989) - T[182-650] 2.0E-79
SUPERFAMILY
ARM-type_fold (IPR016024) - T[199-639] 2.35E-46
Pfam
Clathrin/coatomer_adapt-like_N (IPR002553) - T[204-637] 4.1E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
AP3D1_HUMAN 23.227 % 90.5 5.0E-19
AP1G1_HUMAN 24.722 % 89.4 8.84E-19
AP4E1_HUMAN 26.496 % 156 8.79E-41