Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S720558.g47111.01.t

Possible name(s)

HECTD2; HERC4; UBE3A

Gene model

Mooccu.CG.ELv1_2.S720558.g47111

Location

S720558 [15,034 / 18,865]

Sequences

Amino acid sequence

Length: 320

>Mooccu.CG.ELv1_2.S720558.g47111.01.p
MLTQWLRRLSTPRFRLIIDSLHQFVTLRLFPSQGQSSVELPPMSKCVWWIPSAIKCLSLL
NNSNNLIKPRIVSFREFYNICLDHIDVLAEFKQWQNRTTHPGFTFCNFPFVLSLASKHKI
LQRDQKRQMMRTARDEIIESVRRRPTRVPDVNQLFCNIVIRRDHLLRDSLEQICTNHRHL
KKKLRIEFVGEPGYDMGGLTKEWFLLLLREILSPDYGTFVHYKKTRMFWFSTADNESYAD
FFLIGVLMGLAVYNSITLDLPFPLLCYKKLLSPATITSISDSVLPISPSYIPGVNAPQQG
STPVGLVPVTLDDLRQIDPV

Nucleotide sequence

Length: 1,934

>Mooccu.CG.ELv1_2.S720558.g47111.01.t
CATGACTGTATAATACTACTGACTCTCTATCGCCATTTAACGGTCAAGTAGGCCTATTAC
ACTAAACGTTACCTACGATATTACTAAAGCCTACATCATAATATACTATCTATCTTTACT
TAAAGCATATATACAACCGATTTAATAAAATCCTTAATTTTTGGCATAATTTTTCTATTC
CAACTTACCTCCAACCTTCCTATACACATATCTCCGGTAAAACTTTCAAGAAAATGGCGT
TACGCGGGCTTTATTCAGTCAATTTATTTATGACGTATTAATGCAATATTGCAAAAAGAG
AAAAAATGGCGATAAAAAAGGGTACGAAATCACCCGCACGAGCTGTACGAAATCGCCCGC
AGGTGGAAGAATGCCCATAAAATCTTCTTCATCAAGATTTGTGGATTTAATtttatttgg
aagtttctatgggaaatttctgatcgaatgatggtggtttggttgactgagcacgatgtg
aagtcgagttctaaacaaagtttcgcaggttagtttttttgtgttttatggaggaaaatg
gaagaaggatcctagaaaactcttcaacaggataggaaatgggataaagtgaggaaggta
tgtcaaataagctatttaatcagtATGTATGATCTAAAACGTAGCGTATCTATTATTTTT
TACATACGGTACCCTAAACCTAAATATTGACGTTCGTGCGAAATCACCCGCCATGTACGA
AATCCCCCGCTTTTACGGTATGTTACATCAATTATTCAAATAATACAATTCTTGTTTTTG
ACAATTTTAAGTTTTTTTACTGTATTTATATTCTAATTCTATGATTTCTGATCAAATAGC
GTCAAGTCGGAAAATGATGTTCGTGCATATTTCATCCTACTGCAGAATCCTCTCTTTAAT
AAATCTTCAACATACGTTGTTTATGCTCATTTACTACGACAGATTGCCACATTACCTGAC
AAAGATCAGATCATGCTAACACAATGGCTCAGACGCCTTTCAACTCCGCGTTTTCGTTTA
ATCATCGACAGTTTACATCAGTTTGTTACGCTTCGGTTGTTTCCAAGTCAGGGTCAATCA
TCGGTAGAACTTCCTCCGATGTCAAAATGTGTCTGGTGGATCCCGTCTGCTATAAAATGC
CTCTCACTGTTAAATAATTCAAACAATTTGATCAAACCTCGCATCGTGTCATTTCGGGAA
TTCTACAACATTTGTCTCGATCATATCGACGTTCTTGCAGAGTTTAAACAATGGCAGAAT
CGAACCACACATCCTGGATTCACGTTTTGTAACTTTCCATTCGTTTTGAGTTTGGCATCA
AAACATAAAATCCTTCAACGTGATCAGAAACGACAAATGATGCGAACAGCACGCGATGAG
ATCATAGAGAGTGTCAGAAGACGCCCAACTCGTGTGCCAGATGTGAATCAGTTGTTTTGT
AACATTGTGATACGTCGAGATCATTTGTTACGTGATTCGCTCGAGCAGATATGCACAAAC
CATCGTCACTTAAAGAAGAAACTTCGTATCGAATTCGTCGGTGAACCTGGTTACGACATG
GGCGGACTCACAAAGGAATGGTTCTTACTTCTGCTAAGAGAGATATTATCCCCCGACTAC
GGCACGTTTGTTCATTACAAGAAAACGCGGATGTTTTGGTTTTCGACGGCTGACAACGAA
AGTTACGCAGATTTCTTCCTCATCGGAGTTTTAATGGGGTTAGCAGTCTACAACAGCATT
ACACTTGACCTTCCGTTTCCGCTTCTATGTTACAAGAAATTGCTTTCACCTGCAACAATA
ACATCAATATCGGACAGCGTACTACCAATATCGCCCTCCTACATACCAGGCGTGAATGCA
CCACAACAAGGCTCAACTCCTGTTGGTTTGGTGCCAGTTACGCTGGATGATTTGCGACAG
ATTGACCCGGTAAT

InterProScan

SUPERFAMILY	Hect_E3_ubiquitin_ligase (IPR035983) - T[477-595] 2.75E-33 - T[630-644] 2.75E-33
ProSiteProfiles	HECT_dom (IPR000569) - T[500-645] 29.163
Pfam	HECT_dom (IPR000569) - T[530-643] 5.5E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
HERC4_HUMAN	29.514 %	119	5.75E-30
UBE3A_HUMAN	33.641 %	126	2.6E-32
HECD2_HUMAN	48.113 %	318	4.62E-103