Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S102570.g09400.02.t

Possible name(s)

EPS15L1; VTI1A; VTI1B

Gene model

Moocul.CG.ELv1_2.S102570.g09400

Location

S102570 [3,983 / 11,123]

Sequences

Amino acid sequence

Length: 219

>Moocul.CG.ELv1_2.S102570.g09400.02.p
MANIFESYEQQFSTLTAEVVSKMNKVSMLHGVEKKSLISNIERQLDEIQELLEQMDLEVR
DVPSNERGKLMNRVKSYQKEYTTLESRLKNMKTSNNDINSLRNNLLSRNDSSMEDQRARL
LDNTETMERSTRRLEAGYRIAVETEQIGQDVLDNLHRDRETISRTRQRLREGDDNLGKSS
RIVSSMMRRIIQNRILTFVIIGIMIIVLIVVIYFSVKKS

Nucleotide sequence

Length: 1,528

>Moocul.CG.ELv1_2.S102570.g09400.02.t
TTTAGTATCACCCGAAGAACTTAATCTGCTTACCGTAGGTTTATCGCTTAGCTTATTAAT
ACCTGGATACGCAGATACGGTAACCTGTTAACTGCCTAAAAAGCTTGAACAACAAATTGG
TTCCGTACCGTATTTTGAAAGCATAAATTGTGAAGATGGCGAATATTTTTGAATCCTATG
AGCAACAATTTTCCACATTGACAGCTGAAGTTGTCAGCAAAATGAACAAAGTATCAATGC
TCCATGGAGTTGAGAAGAAAAGTTTGATCAGCAACATCGAGCGGCAATTGGATGAAATTC
AGGAACTTCTTGAACAAATGGATTTGGAGGTGAGGGACGTTCCCAGCAATGAACGAGGAA
AGTTGATGAACCGCGTGAAATCGTATCAAAAGGAATACACAACACTTGAATCAAGATTGA
AAAATATGAAAACGTCAAACAACGACATCAACAGTCTACGGAATAATTTACTCAGCCGAA
ACGACAGCAGTATGGAGGATCAGCGTGCTCGGTTGCTAGACAACACTGAAACAATGGAAC
GAAGCACGCGACGCCTTGAGGCAGGATATCGAATTGCCGTGGAAACCGAACAAATAGGAC
AAGATGTTCTTGATAATTTGCATCGTGACCGGGAGACGATATCTCGTACCAGACAGCGGC
TACGGGAAGGAGACGACAATTTGGGCAAAAGTTCGAGAATTGTGTCCAGTATGATGCGGA
GGATCATTCAGAACAGAATCCTGACGTTTGTTATCATTGGAATAATGATCATTGTTTTAA
TCGTCGTAATATATTTCTCCGTGAAGAAGTCCTGATATTGCGTTGAACAACAGTGGTTCC
ACCAAGGTGTATCTGTCCATGTTGTGTGTTTTAATGCCTCAAACTTCATACACAATTGAT
GTTGACGAAAGTTAATTGAATTTGGTTCTGTAAAAGATGGTTTCGTACTTCCAATATGTA
CTCTAAGCAGACACCATGCTGTATGTTTGCAGTAAAACCACCAAAAAATTTAGTAAAAGT
AACTCTTTAGTGATAACTTTAGTGATATATGACAATCTCGATCCAATTGTAGGCGACCTA
CTACGCTACCTTTTCTAAACAAAATTTCATTGAAAGCATTCAATAGCTCTTTTTCGCAGG
TAGGTAGCTTTAAAAAATTAGATTTCAATTCCATTTGTTTTCATTCAAAACTTAGACGCT
GTAGCTGTATATGTAATAAACTACCCAAACACTGGATACACTTGTATACAATAATAATTC
ATCACCCAATGTTAAGTTCACATTTTAATGCTTGCACATTCTTCATCAATCGTTCATTTT
TATTAGCTTAGCTTATCTTAAAGCATTCAACTCGTCCTAGTCATGGTGGCAACTATCTGT
AGTCTGTGTTTCACTTTTAGCATATTTCTTTTACCTTTATTATTTTTGTGAATTGTTTTG
TTGTATGTTCGTGACAGCATTTGTCCCTTTCATGTTTTATCTACTGTGCAATAATTTATG
ATATATAAATATATGGTTTACAAATGCA

InterProScan

Gene3D	v-SNARE_N_sf (IPR038407) - T[1-100] 7.8E-31
PIRSF	GOSR2/Membrin/Bos1 (IPR027027) - T[4-216] 1.9E-12
SUPERFAMILY	SNARE (IPR010989) - T[6-91] 3.77E-23
Pfam	Vesicle_trsprt_v-SNARE_N (IPR007705) - T[12-89] 4.9E-21
SMART	T_SNARE_dom (IPR000727) - T[119-186] 1.5E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VTI1A_HUMAN	55.708 %	236	2.27E-79
VTI1B_HUMAN	31.737 %	87	6.76E-21