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  1. Transcript 'KH2012:KH.C2.36.v5.A...'
  2. Transcript 'KH2012:KH.C2.36.v4.A...'
  3. Clone 'csef028b13'
  4. Transcript 'KH2012:KH.S1206.2.v2...'
  5. Transcript 'Moocul.CG.ELv1_2.S10...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S106295.g10287.01.t

Possible name(s)

SPAG1; TOMM70; TTC1

Location

S106295 [18,050 / 19,850]

Sequences

Amino acid sequence

Length: 599

>Moocul.CG.ELv1_2.S106295.g10287.01.p
MSVKNNETSWPTWKLALMIGVPVVAGGVGYYLYTKSKSSDPVPVPKPKESSPAKPQKSPL
KPDDKEKKAKVNINNNPKTETVDNFQKSVDFKNEGNNLFKSGKFDEAIAKYEKAIEICPP
NKSVDLSTFYQNKAAAHEKLKQFDKVVESCTRAIDLNPRYVKALFRRSRAYELLDRKTEC
LEDITAVCIMEQFQNSASMLFADRVLKDIGKAEAKKKFATRKPFMPSAMFVKQYFMSFTD
DVILHPLSEEEEANVTDCGFLNAKKSLLSYDLKDVVEQSSRTISNCSKDAEMQSNEIHSS
GDIDEESQKKVEVDRRYLGHALLLRGTFYLLMGNTKDAKPDLERVINMEGIDKKVVANAL
IKRGSLKMQEQQPEDAKNDFNLAVEKDPNNTDVLHHRGQLHILLSDLESSIKDFEKCIEI
KPDFALPHAQKCFCVYKKAFADQDIVETTRAFAHFEEVMKQFPKCTEIYGLYAQALTDKE
DFTKADEMFAKAIELEPENASQYVHRGMLLLQWKQSMTESVKYVEKALEIDDKCEFAQET
MGTIEVQRGNLGKACRHFDVAIDLAKTEAEMAHLFALKAAAMAQGNLAIKYGLRSAPGM

Nucleotide sequence

Length: 1,800

>Moocul.CG.ELv1_2.S106295.g10287.01.t
ATGTCAGTAAAAAATAATGAAACTTCCTGGCCGACATGGAAATTAGCGCTTATGATTGGC
GTACCAGTTGTAGCTGGTGGTGTCGGTTATTATCTATATACAAAATCAAAATCAAGCGAC
CCTGTTCCAGTACCAAAGCCCAAAGAAAGCAGCCCAGCAAAACCGCAAAAAAGTCCACTC
AAACCGGACGACAAAGAAAAGAAGGCTAAAGTAAACATTAACAATAATCCAAAGACGGAA
ACAGTGGACAATTTTCAAAAATCTGTTGATTTCAAAAATGAAGGCAATAACCTTTTCAAA
AGTGGGAAGTTTGATGAAGCTATTGCAAAGTATGAAAAAGCAATTGAAATTTGTCCTCCA
AATAAATCGGTTGATCTTTCAACGTTTTATCAAAACAAAGCTGCAGCTCACGAGAAGTTG
AAGCAGTTCGATAAAGTCGTGGAATCCTGCACCCGTGCTATTGATTTAAACCCACGTTAT
GTTAAAGCATTGTTTCGGCGTTCTCGTGCGTATGAACTTTTGGATCGAAAAACTGAATGT
CTTGAAGATATTACAGCAGTTTGTATTATGGAACAGTTCCAAAACAGTGCAAGTATGCTG
TTCGCGGATCGTGTTCTCAAAGATATTGGCAAAGCTGAAGCAAAGAAAAAATTTGCAACC
AGAAAACCGTTCATGCCATCAGCAATGTTTGTCAAACAATATTTTATGAGTTTTACTGAT
GATGTCATCTTGCATCCACTCTCAGAAGAAGAGGAAGCTAACGTGACTGACTGTGGTTTC
CTTAATGCCAAAAAATCTTTGCTCTCTTATGATTTGAAAGACGTTGTGGAACAGTCTTCA
CGTACAATCAGTAACTGCAGCAAAGACGCTGAAATGCAGTCGAATGAAATTCATTCATCT
GGTGATATCGATGAAGAGAGTCAGAAAAAAGTTGAAGTGGATCGACGATACCTTGGTCAT
GCGTTGTTGCTTCGTGGCACATTTTATTTATTAATGGGAAACACGAAAGATGCCAAACCA
GACTTGGAGAGAGTGATAAACATGGAAGGAATCGATAAAAAGGTTGTGGCAAATGCATTG
ATTAAAAGGGGAAGTTTGAAGATGCAAGAACAACAACCTGAAGATGCGAAGAATGATTTT
AATTTGGCTGTTGAGAAAGATCCCAATAACACCGATGTTCTGCACCACCGCGGCCAATTA
CATATTCTGCTATCAGATTTAGAGTCTTCCATAAAAGACTTTGAAAAATGCATTGAAATC
AAACCAGATTTTGCATTGCCACATGCTCAGAAGTGTTTCTGTGTGTATAAGAAAGCTTTT
GCAGATCAAGACATCGTTGAAACCACGCGAGCATTTGCGCATTTTGAAGAAGTCATGAAA
CAGTTTCCAAAATGTACGGAGATTTATGGGCTTTATGCGCAAGCGTTAACTGATAAAGAA
GATTTTACCAAAGCGGATGAAATGTTTGCCAAAGCCATTGAGCTAGAACCTGAAAATGCT
TCACAGTACGTCCACAGAGGAATGCTTCTTTTGCAGTGGAAGCAAAGCATGACGGAAAGT
GTTAAGTACGTTGAAAAAGCTCTGGAGATTGATGACAAGTGTGAATTTGCACAAGAAACC
ATGGGAACGATTGAAGTGCAACGTGGAAACTTAGGAAAAGCTTGCCGGCATTTTGATGTT
GCGATTGATTTGGCGAAAACTGAAGCAGAAATGGCTCATTTATTCGCTTTGAAAGCTGCG
GCCATGGCACAAGGAAACTTAGCAATAAAATATGGATTACGATCAGCACCTGGCATGTGA

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[73-191] 6.9E-30 - T[192-590] 1.2E-73
ProSiteProfiles
TPR_repeat (IPR019734) - T[88-121] 9.942 - T[127-160] 8.29 - T[319-352] 6.195 - T[357-390] 8.968 - T[391-424] 9.883 - T[466-499] 10.65 - T[535-568] 6.166
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[88-160] 14.785 - T[319-568] 32.234
SMART
TPR_repeat (IPR019734) - T[88-121] 0.0013 - T[127-160] 3.4E-4 - T[161-194] 140.0 - T[319-352] 10.0 - T[357-390] 0.012 - T[391-424] 0.0042 - T[466-499] 3.2 - T[500-534] 67.0
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[91-187] 5.8E-24
Pfam
TPR_repeat (IPR019734) - T[129-159] 0.045 - T[392-423] 6.3E-5 - T[467-499] 5.8E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TOM70_HUMAN 45.771 % 548 0
TTC1_HUMAN 37.255 % 80.1 1.83E-16





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