- Transcript 'KH2012:KH.C1.124.v1....' >
- Transcript 'KH2012:KH.S612.3.v1....' >
- Transcript 'KH2012:KH.C1.313.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S107769.g10678.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S107769 [68,431 / 74,134]
Amino acid sequence
Length: 1,113
>Moocul.CG.ELv1_2.S107769.g10678.01.p
MLVVCKTVLAFVLIVAVNSQEECIKGPSTWYQGTRSTTGEGLTCQRWDVTVPHKPNHIPK
DGGHHNYCRNPDGDLKGTWCYTTDNATRWQYCNITKCEDNSLVIWTNYDGSSESTHLLSV
KADPEIVKQKTDSTGTFNVTVVTGTNKTMSEFWALAASYGEKSLYFTDYRSEYVGIRRIQ
NNMTLRLFEGMAHGIESMAFDWKTKNLYWTDSEFKWVMVAEDTYQYYVPVYRTEPDPPYG
LAIHAVKRQLIFSTYKALGSKIISTDLAGKNPQVLFKFPEVFDVTGITVDYTDDRIYWTD
FTGYGGMVMSSLLDGSNKTQHHYRGGSIFWGVAAYLDYLYVTDVHARYSVTAEKFYSVWI
INKESKQTFRYTLNGKPRGISVYSENEEFSLDEDLVLGECDSNALCDHICLPRVNATREC
ACSLGYHLESDGVSCKPKLINDEYLLIADAGQGKLFQVPINSSGDVKNDNYSVVPLQAGW
KAVTVAVDAHTKYLYWSDKKTPSVSRVNLDGSRSKKVASKHANSIAVDPQTGNVFWSDSE
SDYIYISQPEQDFKKVIVYPEPDKSNSSIRMIVQDLKHRYLYWTDTNSVEGKGEVVRCRF
DGTEKTVVMKNLNWPHAITIDYALNSLFVAEAKLALIHELDLDKLNAKTTDFNLTQTTSK
QHDVSPYISKINPYIIDIKVHHDHIYVVDGKSSRLERFNLTLGPASMKPYGPAEFFRVTT
VSVYSKAIYEKYIQTITNPCQNALCRHACVAVADDDYVCLCPDGEVAIAFICVANATATT
PTPDSPPVPINCPDDITIRTSRCETGATVIWSPPSWNDDITPVTSLRIVKPIFSPPYKFS
EGNFNLFYTATDSSNKVGHCSFQIKVESVRCPDAPSARPGMQKSAATCGTLYGSSLNITC
IDNTQKVSSMGKLYDRYTLTCQAGGYWSTSMSSDAKCVSPTTTAPSTTTSTSTTGTTTTI
STTSSTTQTTTTTTQRTTTTPITTTQITTTTTIPTTTTTTTTPTTTSTTQSSSTKPTGSS
TVSTSKATVSTTTANGTVGVAEASSGSGGLSGGAAAGIAILVIALVIIIVVIVVVTLRRS
HPFFVKMRFPMFWKSQDDTVDLHVSNDNHYTVM
Nucleotide sequence
Length: 4,169
>Moocul.CG.ELv1_2.S107769.g10678.01.t
TATTTTAAGATATTATTATTGGCAACCGTATTCTAGTTCTATAATAATAATTTGGGTTCC
AGCTATACAAACATGCTGGTTGTTTGTAAGACAGTTCTTGCGTTTGTGCTAATTGTAGCA
GTCAACTCTCAAGAAGAATGCATCAAGGGTCCAAGTACTTGGTACCAAGGAACTCGTAGT
ACGACTGGAGAAGGTTTAACATGCCAAAGATGGGATGTCACTGTTCCACACAAGCCAAAT
CACATTCCAAAAGATGGGGGTCATCACAATTACTGCAGAAATCCCGATGGCGATCTTAAG
GGTACATGGTGTTACACCACTGATAATGCAACCAGATGGCAATACTGTAATATCACAAAA
TGCGAAGATAATTCACTTGTGATTTGGACAAATTATGATGGATCGAGTGAAAGTACACAT
TTATTATCAGTTAAGGCTGATCCCGAAATTGTTAAACAAAAGACCGATAGTACTGGAACA
TTTAACGTAACTGTCGTTACTGGGACAAACAAAACGATGAGCGAATTTTGGGCGTTAGCT
GCGAGTTACGGCGAAAAGTCTCTCTATTTTACTGATTACAGATCGGAATATGTTGGTATA
AGACGAATTCAGAACAACATGACTCTGCGTTTATTCGAGGGAATGGCCCATGGTATCGAA
AGCATGGCATTTGACTGGAAAACTAAGAATTTGTACTGGACTGACTCTGAGTTTAAATGG
GTGATGGTTGCTGAAGATACCTACCAATATTACGTTCCCGTTTACAGAACAGAGCCTGAT
CCTCCATATGGACTCGCAATACACGCAGTTAAAAGACAACTGATCTTTTCAACATACAAG
GCACTTGGATCCAAAATTATTAGCACGGATTTAGCCGGGAAAAACCCACAAGTATTATTC
AAATTCCCCGAAGTTTTTGACGTAACTGGAATAACCGTTGATTACACTGATGACAGGATT
TACTGGACCGATTTTACTGGTTATGGCGGTATGGTGATGAGCTCACTTTTGGACGGAAGC
AACAAAACACAACATCATTACAGAGGAGGATCCATATTCTGGGGCGTTGCCGCTTACTTG
GATTACTTATACGTCACTGATGTCCATGCAAGATACAGCGTAACAGCAGAAAAATTCTAC
TCAGTGTGGATAATTAATAAAGAGTCCAAACAAACCTTCCGATATACTCTTAATGGCAAA
CCACGCGGAATATCAGTATACAGCGAAAATGAAGAGTTCTCTCTCGACGAAGATTTGGTA
TTGGGAGAATGTGATTCAAATGCCTTATGTGACCACATTTGCTTACCACGCGTGAACGCT
ACAAGAGAATGTGCCTGCTCTCTTGGATATCATTTAGAATCCGATGGAGTATCTTGCAAA
CCAAAACTTATCAATGACGAATACTTGCTGATAGCAGATGCTGGCCAAGGGAAACTTTTC
CAAGTTCCAATCAACAGTAGTGGTGATGTGAAGAATGATAACTACAGTGTTGTTCCATTA
CAAGCAGGATGGAAAGCAGTCACAGTTGCTGTGGACGCACACACCAAATATCTTTACTGG
TCGGATAAGAAAACTCCTTCTGTGAGCAGAGTTAATCTTGATGGGTCAAGAAGTAAAAAA
GTGGCCAGCAAGCATGCCAACAGTATTGCTGTGGATCCACAAACTGGAAATGTGTTTTGG
TCTGATAGCGAAAGTGATTATATCTACATATCTCAACCTGAGCAAGATTTCAAGAAAGTC
ATCGTGTACCCCGAACCTGACAAGTCAAATTCTAGCATTAGAATGATTGTCCAAGATCTC
AAACATAGATATTTGTACTGGACTGACACAAACTCTGTCGAAGGAAAAGGTGAAGTTGTC
AGATGCCGATTTGATGGTACCGAGAAAACAGTTGTCATGAAGAATCTAAACTGGCCTCAT
GCCATCACCATTGATTATGCTTTGAATTCGTTGTTCGTTGCGGAAGCAAAACTTGCTTTG
ATTCATGAATTAGATCTTGACAAACTGAATGCGAAAACAACTGACTTTAACTTAACACAA
ACTACATCGAAGCAACATGACGTGTCACCATATATTTCCAAAATAAATCCATATATTATT
GATATAAAAGTGCATCATGATCACATCTATGTCGTTGATGGAAAGAGCAGTCGATTGGAA
AGATTTAACTTAACACTTGGTCCTGCTTCGATGAAACCATATGGGCCTGCAGAATTCTTT
AGGGTGACAACTGTATCTGTATACAGTAAAGCAATATATGAGAAATACATACAAACAATT
ACGAATCCATGTCAAAATGCACTTTGCAGACATGCATGTGTCGCCGTAGCTGATGATGAC
TATGTATGCCTGTGTCCAGATGGTGAAGTGGCCATTGCTTTCATTTGTGTGGCAAACGCT
ACTGCAACAACCCCAACTCCAGATTCCCCACCAGTTCCAATAAACTGCCCTGATGATATC
ACAATTAGAACTAGCCGATGTGAAACTGGAGCTACTGTAATATGGTCACCGCCAAGCTGG
AATGATGACATTACTCCGGTAACTAGTCTTCGAATCGTCAAGCCAATCTTCTCCCCACCA
TACAAATTCTCAGAGGGAAATTTTAATTTATTTTACACTGCCACTGATTCATCCAACAAA
GTGGGGCATTGTTCTTTCCAAATTAAAGTAGAATCTGTGAGATGCCCGGATGCACCAAGT
GCAAGACCTGGAATGCAAAAATCTGCAGCAACATGTGGAACACTATACGGATCATCACTC
AATATCACCTGTATAGATAACACCCAAAAGGTGTCTTCAATGGGGAAGCTTTATGATAGA
TATACACTTACCTGTCAAGCTGGAGGTTATTGGTCGACAAGTATGTCATCAGATGCAAAA
TGTGTTTCCCCTACAACTACAGCTCCATCAACCACTACTTCCACATCAACGACAGGTACA
ACTACAACCATATCTACCACTTCTTCCACAACACAAACCACCACAACAACCACACAACGC
ACTACCACCACACCGATAACTACTACACAGATCACTACTACAACTACCATACCCACTACT
ACCACCACAACAACCACACCTACAACTACATCAACAACTCAATCTTCTTCTACCAAACCA
ACAGGCAGTTCCACTGTTTCCACAAGCAAAGCGACAGTGTCAACCACAACGGCAAATGGC
ACCGTTGGCGTGGCGGAAGCATCTTCTGGAAGTGGAGGTTTATCGGGCGGTGCAGCGGCA
GGAATAGCTATATTGGTTATAGCGCTTGTTATCATAATCGTCGTCATAGTTGTTGTAACA
TTAAGGCGAAGTCACCCATTTTTCGTGAAAATGAGGTTTCCAATGTTTTGGAAATCACAA
GATGATACAGTGGATTTACATGTTTCCAACGACAATCATTACACAGTAATGTGATAATTG
GTTTTAACCTGTGATATAATATAATGTTAATGACCATAACGATGCATGATTGTCCTTTTT
TTTTGTTTTATTATTTTTTTCAAATCAAACCAACTTTAAAATGTTCTGCTTTATCATGAA
TGGAGATCACTTAGAGTTACGTTGCGCGGCTGACTATTGTACTAATTTATGCAAATTTAA
TTAACAAAATTAAAACTGTTAATCCTAGAATCCGCAACCGCCCTATTTGGGAAGTTTCTA
AATTTTCTTTCCCTGTCTTTTGGAAGACGAAGTCCGATGATGCTGTAAACATGGGAACGG
CCAGTAACACTGCACCTTATGAGATTATGTCCTAAATGACGAGGTTTACATTTTTATAAA
GCTTGAACACAGCTTGCGCATACTTTTATATGAATTCTTTTGAATCATCTATTTTATCTC
CATTCCAACAGAGTTATATGTACACTACACAAGTGCCTTATCTTTTATATACGAACTCAC
TAATATATATTCAATTTTGTGCCAAATTGTTTGGTTACAAATATAGTATTTTAAAGTATA
TATAATATTTTCTAAAAAATCACTTAAATTCAAATGTATTACCAGAAAGCATACGATTAT
TTCATAAGACATAATATACGGTACAATAGTATTATATAGTTATGTATTTTTAAATATATA
TTATTATTTCCAAACTGCTATATGCTTGTGTCATTTACCAGTAACAGTGATCCTTCGTTT
GTACGATATTGTGAAATAAATGTCTTAAA
| Gene3D |
Kringle_sf (IPR038178) - T[10-106] 2.1E-28 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[13-102] 1.81E-28 |
| SMART |
Kringle (IPR000001) - T[21-99] 1.7E-23 |
| ProSiteProfiles |
Kringle (IPR000001) - T[22-97] 21.879 |
| Pfam |
Kringle (IPR000001) - T[23-97] 2.4E-18 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[67-80] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[107-442] 1.3E-45 - T[443-763] 5.0E-50 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[162-204] 6.118 - T[205-247] 8.021 - T[248-293] 4.633 - T[294-318] 7.07 - T[492-519] 9.042 - T[532-558] 5.863 - T[579-624] 11.293 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[185-225] 2.8 - T[228-272] 51.0 - T[273-318] 3.3E-4 - T[473-514] 0.0026 - T[515-554] 0.92 - T[555-605] 12.0 - T[606-647] 93.0 |
| SMART |
EGF-like_dom (IPR000742) - T[399-436] 0.01 - T[739-773] 0.12 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[782-868] 19.318 |
| Pfam |
HYR_dom (IPR003410) - T[786-866] 5.9E-6 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[869-939] 7.785 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1B_HUMAN | 23.887 % | 130 | 2.02E-30 |
| LRP4_HUMAN | 22.658 % | 139 | 3.09E-33 |
| LRP6_HUMAN | 23.52 % | 142 | 4.4E-34 |