- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S108337.g10855.01.t
Possible name(s)
HSPG2; MALT1; SIGLEC1
Gene model
Location
S108337 [4,535 / 5,906]
Amino acid sequence
Length: 456
>Moocul.CG.ELv1_2.S108337.g10855.01.p
MEQNFLSPWIDLLTHPREQSIKEGEQLMLICKADGKPSPLHFQWFSNGQLLPEQEANILM
IPHTSSKDSGKYKCRVSNGHVTEWSKEVMVLVGSRPTDKVALLIGNQSYLNDNQLSASVN
DVIELSQKLEKIGYKTYVFVDLTYNLMLRVLKWFFSLLSPQAYCFVYFAGHGFENGESYM
VPIDAPPKYQSHHCFSVNYILQGVQKYDLSLTLLCLDTCRKFNLNEHAPQLHSTERGYPN
VVISHATTMSLEAYELKDQNISVYAKYLAQHITNDDFVLKMLADVHQAMNTDPHTNGKQI
AEMRTTLYQPRKLTDTVIHSNKPNIVQKSTDYYNIWKLLQRQERKNYALHFDIGVLVDLS
FCLPAYNILKITASLRETFKNMEFRFMIFLPNDSQHACSCKSSDNSTLYINCLSYSSRNA
VVKITIRVLCKGQNSKVFFEDFSFVHNVPIPKFHTI
Nucleotide sequence
Length: 1,371
>Moocul.CG.ELv1_2.S108337.g10855.01.t
ATGGAACAAAATTTTCTATCACCGTGGATAGATCTTCTCACACATCCTCGAGAACAATCG
ATAAAAGAAGGAGAACAATTGATGCTTATTTGCAAGGCCGATGGAAAACCGAGTCCATTG
CATTTTCAGTGGTTCAGCAATGGACAGCTTTTACCGGAACAAGAAGCCAATATTTTAATG
ATACCTCACACATCGTCGAAAGACAGCGGAAAATATAAATGTCGTGTATCAAACGGTCAT
GTGACAGAATGGTCTAAAGAAGTTATGGTGTTGGTAGGATCACGACCAACTGATAAAGTT
GCACTATTAATTGGGAATCAAAGTTATTTAAATGACAATCAGCTCTCTGCATCTGTAAAC
GATGTGATAGAATTGTCACAAAAGCTTGAGAAGATTGGTTATAAAACTTATGTGTTTGTT
GATTTGACATACAACTTGATGCTTCGTGTATTAAAATGGTTTTTCTCCCTACTTTCGCCG
CAAGCGTACTGTTTTGTGTATTTTGCTGGACATGGATTTGAAAACGGCGAAAGTTATATG
GTTCCAATCGACGCTCCCCCAAAATATCAATCACATCATTGCTTCTCTGTTAATTACATC
CTACAAGGAGTTCAAAAATACGACTTGAGTTTGACGTTGCTTTGCCTGGATACTTGTCGT
AAATTTAACCTCAATGAGCATGCGCCACAGTTGCATTCAACAGAACGAGGATATCCAAAT
GTAGTCATCAGCCACGCTACCACGATGAGTTTGGAAGCATATGAGTTAAAAGATCAAAAT
ATCAGCGTTTATGCAAAGTATCTCGCTCAGCATATAACCAATGATGATTTTGTGTTAAAA
ATGCTGGCTGATGTACACCAAGCGATGAATACTGATCCTCACACAAACGGAAAGCAGATT
GCTGAGATGCGAACGACGTTGTACCAACCAAGGAAACTCACTGATACAGTGATACATTCA
AATAAACCGAACATTGTACAGAAAAGTACAGACTACTACAACATATGGAAGTTACTACAA
AGACAAGAACGCAAAAATTATGCGTTGCATTTTGACATCGGTGTGTTAGTGGATTTATCA
TTTTGTTTACCTGCGTATAATATTTTAAAAATAACAGCAAGCCTGCGGGAAACATTTAAA
AATATGGAATTTCGGTTTATGATTTTTCTTCCCAATGATTCTCAACATGCTTGCTCATGT
AAAAGCAGTGATAACAGTACATTGTATATTAATTGTTTAAGTTACAGCAGCCGTAATGCT
GTCGTTAAAATTACTATTCGTGTTTTATGCAAAGGCCAAAACAGTAAAGTATTTTTCGAA
GATTTTAGTTTTGTTCATAATGTTCCTATCCCCAAGTTTCACACTATCTAG
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[8-89] 13.421 |
| Gene3D |
Ig-like_fold (IPR013783) - T[9-91] 3.0E-19 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[12-90] 8.57E-16 |
| SMART |
Ig_sub (IPR003599) - T[16-93] 1.1E-9 |
| SMART |
Ig_sub2 (IPR003598) - T[22-81] 5.0E-5 |
| SUPERFAMILY |
Caspase-like_dom_sf (IPR029030) - T[83-314] 1.2E-29 |
| ProSiteProfiles |
Pept_C14_p20 (IPR001309) - T[97-176] 12.968 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MALT1_HUMAN | 29.777 % | 177 | 1.13E-48 |