Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C9.264.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  5. Transcript 'Moocul.CG.ELv1_2.S10...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S108505.g10897.01.t

Possible name(s)

VIPAS39

Gene model

Moocul.CG.ELv1_2.S108505.g10897

Location

S108505 [6,960 / 14,344]

Sequences

Amino acid sequence

Length: 516

>Moocul.CG.ELv1_2.S108505.g10897.01.p
MSGYTKKTGMSRYEDDSEDYWTTNKPIMKPFNFDDDDLDDSIETVNWDGTRSAASSKSNT
LNSVKPSTPSSYAVKPSSSISTGAMSARYSRKPTGSTPSNNYNRSQDITKTPQANTRSPR
PVVNESKSISEAVFGREKPISTTDISKLEAEIASLRRQLHQAKKERAVAPSKEETLKRFM
VGDTCALELYKSRDEKSSLLDSAIERRDGNAILAITLFMRNTLKREIFSRELMGRPIAVD
HYCAYLRMISETEELHEILTVLGRTEEAAMLKYRQCLKSSKSAELRVNSLQDCIKYYFDS
DPRLSHETAQIQEQCMLLRRQIVVDDSDKQTQDSAMHSVFKTHPRRDSILHKSVITTLYY
CCYYHWGEAEGLLSSPLSIKLEHKVSEKQFTYIAIAALCRMRKWKDLEKLLTQERKLWRS
ARLYSVIGMEKVVDVLSKNLAPSDILSKYCAEIETSDSRLATAKKMNCYRIAIDTMVYQK
DRQALLLYANIIPDTQQLMRQYSIEQSRKPDVKWKN

Nucleotide sequence

Length: 2,015

>Moocul.CG.ELv1_2.S108505.g10897.01.t
TATCAACTCAATCTCGTTCCTTCAAGCGGAACGGTAGACATGTTTCAGTTCTCTCTACAG
ATCTGAGAGAAAGGTCCCACAGACCGTACTATCTAGAAAAGGCAGAAACCGAGAATGCAG
AATGCCATAAAAATCACACAACCATTTCTGTTTTAAAAAGCTGTTCATAAGTGGAGTTGT
TATTTCGATTTTCACAGACTGATATAGGCCTATGCATAGCCGCCAGACTGCATTAAGAGT
TAAACCACTTTTCCACAATCAGCAGAAAGCCGATCTTCCATAGTTCCATGTTACGGAAGA
GGTGGGTAGAAAGAAGTGAAAATGAGCGGATATACAAAGAAAACAGGGATGTCTCGCTAT
GAAGATGATTCCGAGGATTATTGGACGACCAATAAACCAATAATGAAACCGTTTAATTTT
GATGATGATGATTTGGATGATAGCATCGAAACTGTCAACTGGGATGGCACAAGATCAGCA
GCATCAAGCAAATCAAACACATTGAACTCTGTTAAACCGTCCACACCATCAAGTTATGCT
GTGAAACCTTCATCCAGTATTTCTACGGGGGCAATGTCAGCGAGATATTCACGAAAACCC
ACCGGATCGACACCGTCTAATAATTACAATCGTTCACAGGATATCACCAAAACTCCTCAA
GCTAACACACGATCACCTCGACCAGTTGTGAATGAATCTAAATCAATATCTGAAGCTGTT
TTTGGTCGGGAAAAACCAATATCCACCACCGATATTTCAAAACTAGAAGCGGAAATAGCA
TCACTACGCCGTCAACTTCATCAGGCGAAAAAGGAAAGAGCTGTGGCGCCATCTAAGGAG
GAAACTTTGAAACGATTTATGGTTGGAGACACATGTGCGTTGGAATTGTACAAGTCGAGA
GATGAAAAAAGTTCTTTATTGGATTCTGCGATTGAAAGACGTGACGGAAACGCAATTCTT
GCCATTACATTGTTCATGAGAAACACTCTTAAACGAGAAATCTTCAGTCGAGAGTTGATG
GGTCGTCCGATAGCAGTTGATCATTACTGTGCTTATCTTCGAATGATCTCAGAAACAGAA
GAACTTCATGAGATCCTAACGGTGCTCGGGCGAACCGAAGAAGCGGCCATGTTGAAATAT
CGACAATGTTTAAAAAGCTCAAAATCTGCCGAACTTCGTGTCAACAGCTTACAAGACTGT
ATTAAATACTATTTCGACTCCGATCCTCGCCTCAGTCACGAAACCGCACAAATACAAGAA
CAATGCATGTTACTACGGCGACAAATCGTCGTTGACGACAGTGACAAACAAACACAAGAT
TCTGCGATGCACTCAGTCTTCAAAACACACCCACGTCGAGATAGCATACTTCATAAGTCG
GTCATCACTACGCTGTATTACTGTTGTTATTATCACTGGGGAGAAGCTGAGGGTCTCCTC
AGCAGTCCACTGTCAATCAAACTTGAACATAAAGTTTCCGAGAAACAATTCACTTATATC
GCCATCGCGGCACTTTGTAGAATGAGAAAATGGAAAGACCTTGAAAAGTTATTGACACAA
GAACGGAAGTTATGGAGAAGTGCACGATTGTATTCTGTAATCGGAATGGAAAAAGTTGTT
GATGTTTTAAGCAAAAATCTTGCACCATCTGATATATTATCAAAATATTGCGCCGAAATT
GAAACATCAGATAGTCGATTAGCCACTGCTAAGAAGATGAACTGCTACAGGATTGCAATT
GATACGATGGTTTACCAGAAAGATCGACAAGCGTTACTGTTGTATGCAAATATCATTCCT
GATACACAACAATTAATGAGACAATACTCAATTGAACAAAGCAGAAAACCGGATGTCAAG
TGGAAGAACTGAACAGCAAGCAATCATACTTCATCATCAACAATATTTTTAATCATGAAA
ACTGCTTTGAATTTGTGCAATGCAATACGATGCTTCTACGTGCTACTAATAAATGTGTAG
TATTATTTTTAATATTTATTAAACTTATACATAAA

InterProScan

Gene3D
Vps16_C_sf (IPR038132) - T[186-470] 7.6E-20
Pfam
Vps16_C (IPR006925) - T[189-322] 3.4E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPE39_HUMAN 31.762 % 217 1.32E-64





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.