- Transcript 'KH2012:KH.C12.107.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Cisavi.CG.ENS81.R37....' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S109151.g11110.01.t
Possible name(s)
HMCN1; SEMA5A; THBS1
Gene model
Location
S109151 [3,731 / 4,415]
Amino acid sequence
Length: 193
>Moocul.CG.ELv1_2.S109151.g11110.01.p
CSKSCGKYSIRSRMRICEDPLGRSTIGCVDSLVAEQYQDAQCLAVPCPVDGGWSLWSTYT
ECTASCGGHGQQIKYRECNNPYPVFGGLDCNGPKEHVRQCGNDPCPVNGGWSEWTSWFDC
SSTCGEGNQLYKRFCINPQPKHGGSHCEGSDVMFEPCFVVKCPLEGVWKTWTDWETCRND
CGIVVLNRTRSWI
Nucleotide sequence
Length: 579
>Moocul.CG.ELv1_2.S109151.g11110.01.t
TGCTCAAAATCTTGTGGAAAATATTCAATTCGATCCCGAATGCGAATATGTGAAGATCCA
TTAGGAAGAAGCACCATTGGCTGTGTCGATAGTCTTGTAGCTGAGCAATACCAGGATGCT
CAATGTCTAGCAGTTCCATGTCCAGTAGATGGTGGATGGTCACTTTGGTCAACATACACT
GAATGTACGGCTTCATGCGGAGGTCATGGTCAGCAAATAAAGTACAGAGAATGTAACAAT
CCATATCCTGTGTTTGGTGGGTTGGATTGCAATGGACCAAAGGAACATGTTAGACAATGT
GGAAATGACCCATGTCCTGTGAATGGTGGATGGTCAGAGTGGACATCTTGGTTTGACTGC
AGTTCAACTTGTGGTGAAGGAAATCAATTATACAAACGATTCTGCATTAACCCGCAACCT
AAGCATGGTGGTTCACATTGCGAAGGAAGTGATGTGATGTTTGAACCTTGTTTTGTTGTG
AAGTGTCCCCTAGAAGGAGTTTGGAAAACCTGGACAGATTGGGAAACTTGTAGAAATGAT
TGTGGGATTGTTGTTTTAAACCGAACAAGATCTTGGATT
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[46-105] 4.84E-14 - T[104-162] 1.02E-14 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[48-105] 1.3E-16 - T[106-162] 1.9E-17 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[50-106] 11.67 - T[108-163] 12.503 |
| SMART |
TSP1_rpt (IPR000884) - T[53-106] 2.2E-8 - T[111-163] 4.1E-10 |
| Pfam |
TSP1_rpt (IPR000884) - T[54-105] 3.1E-10 - T[112-162] 3.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 41.753 % | 143 | 1.4E-39 |
| TSP1_HUMAN | 37.952 % | 99.4 | 1.92E-24 |
| SEM5A_HUMAN | 39.286 % | 103 | 1.05E-25 |