- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S109202.g11136.01.t
Possible name(s)
YBX1; YBX2; YBX3
Gene model
Location
S109202 [17,798 / 22,546]
Amino acid sequence
Length: 311
>Moocul.CG.ELv1_2.S109202.g11136.01.p
MADVENVQGEAETAPVKSEKIVLATKCTGVVKWFNVRNGYGFINRDDNKEDVFIHQTAII
RNNPRKYLRSVGDGEAVQFDVVEGEKGLPEAANVTGPEGEPVKGSKYAADRRRFRRPRYQ
SGGPRRNAREDEGTELKENDEEEEGKEQEDDRPRRTYRRPYRRRPWWYRNNRRPRQPRTD
EEGEGDPEKEDGGEQKQRPPRQRRPRPRRPRRPKEGESAQEGEEQPVGNGEDQPPPRRRR
FRPRRPKPALDEDGKPIENGEEGEKPPRRRYRRPRPKQENRGENQSSEAPAGGDAAPKAV
ESAAPVEVVAN
Nucleotide sequence
Length: 1,939
>Moocul.CG.ELv1_2.S109202.g11136.01.t
AAGCGCTCATTGCTGCTTTCAGCGAAAACGAAATGAAAAGCTAAGACAGCTGCAACGAAA
AAGGCAATATATTTTCTTAGTTTGTTCTATTATATTTTTTAACGGCCTTATGACGTGGGC
AGTCAACGTGCAGAGACGCCATTAACATCAAAGTCGACTGTGGTAGAAGAAACATCTTGT
CAAAATCTCCTTCGGGTATCTTGTAACATCGCCCTTAAATAAGGCACTGTAACATCATGG
CGGATGTAGAAAACGTACAGGGTGAAGCTGAAACAGCCCCCGTGAAATCTGAGAAGATAG
TACTAGCTACAAAATGTACTGGCGTAGTGAAGTGGTTCAACGTGCGAAACGGCTACGGTT
TCATCAACAGAGATGACAACAAGGAAGACGTATTCATCCACCAAACTGCCATCATCCGAA
ATAATCCCCGGAAGTACTTGCGCAGTGTTGGAGATGGGGAAGCCGTTCAATTCGACGTTG
TGGAAGGAGAGAAGGGCTTACCAGAAGCTGCCAACGTAACTGGCCCAGAAGGAGAGCCGG
TAAAAGGCAGCAAATACGCCGCAGACCGGCGTAGATTCCGTCGACCTCGCTATCAATCTG
GTGGTCCACGAAGGAATGCGCGGGAAGACGAGGGAACGGAACTTAAAGAAAACGACGAGG
AGGAAGAAGGCAAAGAGCAAGAGGATGACCGACCTCGAAGAACATATCGTAGACCTTACA
GACGCCGACCTTGGTGGTACCGTAATAACCGACGACCGAGACAACCAAGGACTGACGAAG
AGGGGGAGGGTGATCCTGAGAAGGAAGATGGAGGGGAACAAAAACAACGTCCTCCAAGAC
AACGTAGACCTCGTCCCAGACGACCACGAAGACCCAAGGAGGGAGAGTCGGCTCAAGAAG
GGGAGGAACAGCCAGTTGGAAATGGGGAGGACCAACCTCCACCACGTCGTAGAAGATTCA
GACCCAGACGACCAAAGCCTGCCCTTGATGAAGATGGCAAGCCGATTGAAAACGGTGAGG
AGGGTGAAAAACCTCCTCGACGTCGGTACAGACGACCGAGACCAAAGCAAGAAAATCGTG
GGGAGAATCAATCTTCTGAAGCACCTGCTGGAGGAGATGCTGCCCCAAAAGCAGTGGAAA
GTGCTGCTCCTGTCGAAGTTGTTGCAAATTAAGATCGAATCAAAGAAATTGCCTCGTTAA
AACAATGCTGGATGTTAGTTAGATCTTAAAAATTCATGTCTTTGTTAAATAGCAATTGTT
TAATATCACCCACCCATCCAGCAACATGATGGTGGATGTTATTTCTGATGTACTTCTTTT
GGTAAATGGTATTGAGTAATTTCCATATTTTGTTCAGCTGCTTTGCATTTTTGCGCTTTC
AAACGCATGATTTAAGTTTTTCTTTTCTCCATCCAAAACAAGCTGATTTTACCTTCAATT
TACCGGCTCGCATGCACAAATCAAATTAAATCTTTAGCCAGGATCTGTGCATTTATTTAT
ACATACCATCTCTGGCTCATAAATTTTGCTTCAAAACCGATAAAACACTGACCAGTCTTG
CGGTCAGCCAGTCAATAGTGATTGCATGTGACCATCTGTACTTCGTAGTTTAACACTAGC
GGTTATCATTGTTTGGTATTCATTAAAAAACCCGCACTGTGTCTCGCAAGATCATAATTT
TCGTTGGTTTAATTCTAAACATCTGGATGTCGTCAACCAGTGATTTTATTTACTTACTGC
AGTGTGGACCAGCAGACTACTGAATGTTTACCACTGTAATTAAATGAATTTCTAATTTGG
CTGCTTAGCCTCTTCAGTAGCAAAATATAATAATAATTTTTCTTACTAGTGACTAAATGA
TGTATTGTTAAGTTTCATTTTTATAAGATTTTTTCACTTCTCAAGTTTTGTTGTGATTTA
ATAAAAACACTTTGTGGGA
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[23-96] 3.21E-20 |
| Pfam |
CSP_DNA-bd (IPR002059) - T[27-96] 1.9E-23 |
| CDD |
CSP_DNA-bd (IPR002059) - T[27-96] 6.79849E-20 |
| SMART |
CSD (IPR011129) - T[28-97] 3.6E-20 |
| PRINTS |
CSP_DNA-bd (IPR002059) - T[29-44] 3.9E-19 - T[50-59] 3.9E-19 - T[69-87] 3.9E-19 |
| ProSitePatterns |
Cold-shock_CS (IPR019844) - T[40-59] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| YBOX1_HUMAN | 58.182 % | 162 | 1.14E-47 |
| YBOX3_HUMAN | 80.645 % | 157 | 1.9E-45 |
| YBOX2_HUMAN | 74 % | 155 | 1.5E-44 |