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TRANSCRIPT CARD

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  1. Clone 'citb100d12' > 
  2. Clone 'cien82855' > 
  3. Transcript 'Moocul.CG.ELv1_2.S94...' > 
  4. EST 'BW254625' > 
  5. Transcript 'Moocul.CG.ELv1_2.S10...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S109574.g11265.01.t

Possible name(s)

MITF; TFE3; TFEB

Gene model

Moocul.CG.ELv1_2.S109574.g11265

Location

S109574 [5,879 / 25,783]

Sequences

Amino acid sequence

Length: 453

>Moocul.CG.ELv1_2.S109574.g11265.01.p
MSMYKLKMQLQKEKVQSRLSNPTQYHVQQKQRSQVQEYLSQSLGNTKAMTHKLVPFNNTT
KASSLTTSGVVGGASSLHSTPASPLARLQISSSVDQQMDDVIDNIVSLENSYEDTSHLSS
TLPTVAPNMLQDFSSQASQELRNIQSQDSNTSSSCPPRFIPKVEFPVTNDTDFAAYVQDR
VKKDNHNRIERKRRYNINDRIKELGTLIPKTNDPDMRWNKGSILKASVDHMKILQRKVSR
AKQIEEKEREMRNVNKRLLLRIQELELAAQSSGVAVPQMQDKEDIVSTLLKPDNNPSSSP
FTADQESDIARFPSAIITSPQHQQYNHHQASPQQFVFQTGGNFGSPQTTLPQHNVLSPQQ
VVTIDITSPSHSVSPGATSDFSTVGIEQPSPYSDSSSQQTTIINAPPVGEISMASFESEL
QDLLMNSAGNTTSSLTDLLGSDAQHIFILFVFT

Nucleotide sequence

Length: 1,406

>Moocul.CG.ELv1_2.S109574.g11265.01.t
TTTAGATTTTTTTAATGTAATTTTTCTCGATCAAATTTTTCAAAATGTCGATGTATAAAC
TGAAGATGCAACTCCAAAAGGAGAAGGTCCAATCTCGACTTTCGAATCCGACGCAATATC
ACGTACAACAGAAACAACGTTCGCAAGTGCAAGAGTACCTCAGTCAATCCCTTGGTAACA
CCAAAGCAATGACTCACAAACTCGTCCCATTCAATAATACAACAAAAGCAAGCTCTCTTA
CTACTTCAGGTGTGGTCGGAGGTGCTTCATCTTTACACAGTACACCAGCAAGCCCATTAG
CTCGATTGCAAATATCTTCATCAGTTGATCAGCAAATGGACGATGTTATTGACAACATAG
TGAGCCTGGAAAATTCGTATGAAGACACATCGCACCTCTCATCTACGCTTCCAACTGTCG
CTCCGAATATGCTGCAGGACTTCAGTTCACAAGCATCGCAAGAACTCCGTAACATCCAAT
CGCAAGATAGCAATACATCGTCTAGTTGCCCACCGAGGTTCATACCAAAAGTTGAATTTC
CTGTCACAAACGATACAGATTTTGCTGCGTACGTACAAGACAGGGTTAAGAAGGACAACC
ACAACAGAATTGAACGAAAACGTCGGTATAATATCAACGACAGAATAAAAGAACTTGGAA
CTCTCATACCAAAAACCAATGACCCTGACATGCGTTGGAACAAAGGCTCGATATTAAAAG
CATCTGTTGATCACATGAAGATATTACAACGTAAAGTATCGCGGGCGAAACAGATTGAAG
AGAAGGAACGTGAAATGAGAAACGTTAATAAACGACTTCTACTAAGGATACAGGAACTTG
AACTTGCGGCACAAAGCAGTGGTGTTGCCGTGCCACAAATGCAAGACAAAGAAGACATCG
TTAGCACATTACTCAAACCCGATAACAATCCGTCATCATCACCATTCACTGCTGATCAAG
AAAGTGATATAGCACGGTTTCCATCCGCGATTATCACGTCACCGCAACATCAACAGTATA
ATCATCATCAGGCATCCCCTCAACAATTCGTGTTTCAAACTGGTGGAAACTTTGGTAGTC
CTCAAACAACGTTACCTCAACACAACGTACTATCACCACAGCAAGTGGTAACGATTGATA
TAACATCTCCGAGCCACTCGGTGTCGCCAGGAGCTACCTCGGACTTCTCGACAGTCGGAA
TCGAACAGCCATCGCCGTACAGCGACTCATCATCGCAACAAACAACCATCATTAATGCAC
CTCCTGTTGGTGAAATCAGTATGGCGAGTTTCGAGTCGGAACTTCAGGATTTATTAATGA
ATTCGGCCGGGAACACCACGTCATCTCTCACTGATCTGTTGGGATCCGATGCACAGCATA
TTTTTATTTTGTTTGTTTTCACATAG

InterProScan

Pfam
MiT/TFE_N (IPR031867) - T[14-103] 1.2E-19
PANTHER
TFEB (IPR024098) - T[14-401] 4.6E-84
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[179-243] 3.66E-15
CDD
bHLH_dom (IPR011598) - T[179-239] 5.97421E-15
ProSiteProfiles
bHLH_dom (IPR011598) - T[181-234] 14.869
Pfam
bHLH_dom (IPR011598) - T[182-235] 1.6E-14
SMART
bHLH_dom (IPR011598) - T[187-240] 6.3E-14
Gene3D
HLH_DNA-bd_sf (IPR036638) - T[192-273] 7.7E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TFE3_HUMAN 45.818 % 225 1.78E-67
TFEB_HUMAN 43.704 % 199 1.23E-58
MITF_HUMAN 40 % 191 5.95E-55