- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S110420.g11607.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
S110420 [5,097 / 12,107]
Amino acid sequence
Length: 536
>Moocul.CG.ELv1_2.S110420.g11607.01.p
MSAALNPVAIYNQGADEEKAETARMSSFVGAIAIGDLVKSTLGPKGMDKILLSAGDGGRQ
AGITVTNDGATILKSIGIDNPAAKVLINMSKVQDDEVGDGTTSVTILAAELLREAEKLIA
QKLHPQTIISGWRRATEVARDALETAAMDNGKDEAKFCEDLMNISRTTLSSKLLTQHKDF
FAKMAVDAVLRLKGSGNLEAIQIIKKLGATMTDSKLDEGFLLDKKIGVNQPKRIENAKVL
IANTAMDTDKIKIFGSRVRVDGTAKVAEIELAEKQKMKEKVEKILKHGPTCFINRQLIYN
YPEQLFSDAGVMAIEHADFEGVERLALVLGGEICSTFDRPDLVKLGHCKLIEEVMIGEDK
MIKFSGVEKAEACTIILRGATQQILDESERSMHDALCVLAQTVKETRTVYGGGCCETLMA
RAVEELATKTPGKEAIAMESFARALRQIPITIADNAGYDSAELVSQLRAAHSSGNSDAGL
DMDQGSIGSMKELGITESYQVKRQILLSASEAAEMILRVDDIIKSAPRKRQPEHPH
Nucleotide sequence
Length: 1,812
>Moocul.CG.ELv1_2.S110420.g11607.01.t
GGTTTTATTCTTTAGAGAAAATTGTTAATTTACCCATAAAATTTATCATAATTTATTACC
GGTGCAATACGAAATTGAACTACTCCACATCCCAAGATGAGTGCTGCATTAAATCCTGTT
GCGATCTATAATCAAGGAGCTGATGAAGAAAAAGCGGAAACCGCTCGAATGTCTTCATTC
GTTGGTGCCATTGCAATCGGCGACCTTGTCAAAAGCACACTTGGCCCAAAAGGAATGGAC
AAAATTTTGTTATCTGCAGGAGATGGAGGCCGACAGGCGGGTATCACTGTGACAAATGAT
GGAGCTACAATTCTTAAATCAATCGGAATTGATAACCCCGCAGCAAAGGTCCTTATAAAC
ATGTCCAAAGTACAGGATGATGAAGTTGGTGATGGAACAACATCCGTAACTATCCTTGCA
GCTGAGCTCTTGCGGGAAGCAGAAAAACTGATCGCACAAAAACTTCATCCACAGACGATC
ATCTCCGGCTGGAGACGAGCCACTGAAGTCGCAAGGGATGCACTTGAGACGGCAGCCATG
GATAACGGAAAAGATGAAGCCAAATTTTGTGAGGATTTAATGAACATCTCTCGCACTACC
CTCAGTTCAAAACTTTTAACACAACACAAAGACTTCTTTGCAAAGATGGCCGTTGATGCT
GTGTTGAGACTGAAGGGAAGCGGTAATCTAGAAGCTATACAAATTATTAAAAAATTGGGT
GCAACTATGACAGATTCAAAATTGGACGAAGGATTTTTATTGGATAAAAAGATTGGAGTA
AATCAACCAAAACGTATAGAAAATGCGAAAGTTTTGATTGCAAATACTGCAATGGATACT
GATAAAATAAAGATATTTGGTTCTCGTGTACGAGTTGACGGAACTGCAAAAGTTGCGGAA
ATTGAACTGGCAGAAAAACAGAAGATGAAGGAGAAGGTTGAAAAGATTTTAAAACACGGA
CCTACGTGCTTCATTAACAGACAGTTGATCTACAACTACCCCGAGCAGTTATTCTCCGAT
GCGGGCGTGATGGCGATCGAACACGCTGATTTTGAAGGTGTGGAACGACTTGCGCTCGTT
CTTGGTGGTGAAATTTGTTCCACCTTCGACCGACCCGACCTCGTGAAACTCGGACATTGC
AAACTTATTGAAGAGGTCATGATTGGAGAAGATAAAATGATTAAATTCTCAGGTGTTGAA
AAAGCAGAAGCTTGCACGATAATCTTACGTGGAGCGACTCAGCAAATTTTAGACGAGTCT
GAGCGATCAATGCACGATGCGTTGTGTGTGCTTGCACAAACAGTCAAAGAAACACGAACA
GTATATGGAGGAGGATGTTGTGAAACATTAATGGCACGAGCAGTTGAAGAATTAGCAACA
AAAACCCCCGGCAAAGAAGCTATTGCTATGGAATCATTTGCACGTGCTCTCAGACAGATC
CCCATAACGATTGCGGACAACGCTGGTTATGATAGTGCTGAATTGGTATCCCAACTGCGT
GCAGCTCACTCTAGTGGAAACAGTGACGCTGGTTTAGATATGGATCAGGGTTCGATTGGT
TCAATGAAGGAGCTTGGAATCACCGAATCGTACCAAGTAAAAAGACAAATCTTACTCAGT
GCGTCGGAAGCGGCTGAGATGATTTTACGTGTCGATGACATCATTAAATCTGCACCAAGG
AAACGTCAACCGGAGCACCCACATTGAAATCGTGTGCATGTCGTCGTTTGTGTTCGCATG
TTTCAATACTTTTATATCCGGTTAAAATTCACCTGCGTGTGTTAGTCAATAAACGTTTTC
GTATCAAATCAA
| PANTHER |
Chap_CCT_beta (IPR012716) - T[5-530] 1.1E-286 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[5-530] 1.1E-286 |
| CDD |
Chap_CCT_beta (IPR012716) - T[10-529] 0.0 |
| TIGRFAM |
Chap_CCT_beta (IPR012716) - T[10-530] 1.8E-285 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[17-150] 4.32E-79 - T[406-526] 4.32E-79 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[33-148] 1.4E-187 - T[407-524] 1.4E-187 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[35-525] 6.5E-145 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[36-52] 9.4E-24 - T[93-112] 9.4E-24 - T[374-396] 9.4E-24 - T[408-420] 9.4E-24 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[39-51] . - T[65-81] . - T[93-101] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[149-217] 1.4E-187 - T[371-406] 1.4E-187 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[159-219] 3.05E-25 - T[372-406] 3.05E-25 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[213-379] 1.1E-41 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[218-370] 1.4E-187 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.572 % | 304 | 7.59E-97 |
| TCPH_HUMAN | 35.227 % | 306 | 5.9E-98 |
| TCPB_HUMAN | 78.612 % | 843 | 0 |