- Transcript 'KH2012:KH.C7.55.v1.C...' >
- Clone 'cign039j09' >
- Transcript 'KH2012:KH.C5.386.v1....' >
- Transcript 'KH2012:KH.L40.23.v1....' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S111028.g11884.01.t
Possible name(s)
NONO; PSPC1; SFPQ
Gene model
Location
S111028 [131,408 / 138,310]
Amino acid sequence
Length: 494
>Moocul.CG.ELv1_2.S111028.g11884.01.p
MSKSGRGRYFASPPNNGGFKRGNHPKIKQENHDVKPTANITVKRSETTHQSPNSANLNKA
SFDKANPASTKSGNALDIDEIITSSKPIEKKFTQRSRLFCGNLPSEITQDDFKKIFQKYG
EVSEVYLNNEKGYGFVRLDTRANAEKAKWELDGIQLKNRTIRVRYATHGAALSVKNLSQH
VTNEVLESAFSQFGTVERAIVITDERGRSTEKGIVEFARKSSATKAMQSIKDGVFLLTAS
PRAIAAAPLEQEDAEDGLSEKLISQTPQFFAEREGQPRFAQPGSFEHEFGMRWKALDEME
RQQREQLDKTIANAKAKLESEMEDAIHEHKTMLMKQDLLRRQEELSRLEDARRREMDRRK
QLEMAREDAEKKELEALQQRQEILRAQVQGVRKFANTNQPPPPRNQRGDNDFRRIPQSHG
VGSADQFFKDAIAQELMTAAPPNMNRPPPGFDDGLNNNNFANQGRRNFNYGNAGQRRGHG
NSNAYDNGQKRRRY
Nucleotide sequence
Length: 1,931
>Moocul.CG.ELv1_2.S111028.g11884.01.t
CAGGCTTTCACAGTACAGTTTCAGCTTTCGATTATAGATTTTTCAATTTTACATTGATAG
CGTTTTACTTTAGCGTTTTGCCCTTACACATAAAGATGTCTAAAAGTGGTCGTGGTAGAT
ATTTTGCATCGCCACCTAACAATGGAGGCTTTAAAAGAGGAAATCATCCAAAGATTAAGC
AAGAAAATCATGATGTGAAACCAACTGCCAACATCACTGTCAAACGATCAGAAACTACTC
ATCAATCGCCAAATTCTGCAAATCTTAACAAAGCCAGCTTTGACAAAGCCAACCCAGCAT
CTACAAAATCTGGAAATGCTTTAGATATTGACGAAATTATAACATCATCAAAGCCTATTG
AGAAAAAGTTTACACAAAGAAGCCGATTATTTTGTGGAAATCTACCTTCGGAAATCACAC
AAGACGATTTTAAGAAAATATTTCAAAAGTACGGCGAAGTTTCCGAAGTTTACTTGAACA
ATGAAAAAGGATACGGATTTGTTAGACTGGACACACGTGCAAATGCGGAGAAAGCAAAAT
GGGAATTGGATGGAATTCAACTGAAGAATCGAACGATTCGTGTTCGTTACGCAACTCATG
GCGCTGCTCTAAGTGTGAAGAATTTATCACAACATGTTACCAATGAAGTTTTGGAGTCGG
CATTCTCGCAGTTTGGTACGGTTGAAAGAGCGATTGTTATTACCGATGAACGAGGTCGGT
CAACCGAGAAAGGAATTGTTGAATTTGCACGAAAATCATCAGCTACGAAAGCCATGCAGA
GTATCAAGGATGGTGTATTCCTCTTGACTGCTTCACCACGTGCGATAGCTGCTGCTCCTC
TCGAGCAGGAAGATGCTGAAGATGGATTAAGTGAAAAACTCATCAGTCAAACTCCACAGT
TCTTTGCGGAGCGTGAAGGCCAGCCACGTTTTGCTCAACCTGGTTCATTTGAGCATGAGT
TTGGCATGCGATGGAAGGCTTTGGATGAGATGGAGAGGCAACAACGAGAACAATTGGATA
AAACAATCGCAAATGCAAAAGCAAAATTAGAATCCGAGATGGAGGATGCTATACATGAAC
ACAAGACAATGCTTATGAAGCAAGATCTTCTTCGAAGGCAAGAGGAATTGAGTCGATTGG
AAGATGCTCGAAGAAGGGAAATGGACAGAAGAAAGCAACTTGAAATGGCGCGCGAAGACG
CTGAGAAGAAAGAGTTAGAAGCTTTACAACAGCGACAAGAAATACTGCGAGCGCAAGTGC
AAGGTGTCAGAAAGTTTGCTAATACAAATCAGCCGCCACCTCCAAGGAATCAACGCGGCG
ATAATGACTTCAGACGCATTCCACAGTCGCATGGTGTGGGATCTGCTGATCAATTTTTCA
AAGACGCGATTGCGCAAGAACTAATGACTGCCGCTCCTCCTAACATGAACCGACCACCGC
CTGGTTTCGATGACGGTTTGAACAACAATAACTTCGCTAATCAAGGACGAAGAAATTTTA
ACTACGGAAATGCTGGCCAGCGTCGCGGCCATGGAAATAGCAATGCATATGATAACGGTC
AAAAACGTCGCCGTTATTAAGACACATTCGTGCTAGCAATGTGCTTAGCACAATGTAAAA
TGAAAGACAGCCTCTGATTGACTTAACCGCTACCAAGCGACTTGCCTCAATGGCTACTAC
TGTTTTTCATGATCAACTTTGCTCAATTTTGTACATTTACTTTTTTACTCACGGTTGACA
CCACTATTGATTGTTACAGAAGAAATCGTGTTTAGCAGAAGCGGGACATTTTTTAGTTTT
CAACTTAGTTTTATCGATTCACCAAATTTACTTTTCACAATGTTTCTTTTATGAATATTC
AACCTGTCTTGTGTTTCGCAGTTCGTATGTATTCCTAAGTACAATAAATAATATGTACAG
AAAAAAAACTT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[79-170] 2.4E-23 - T[171-259] 1.2E-20 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[96-230] 4.12E-34 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[96-168] 17.882 - T[170-251] 12.458 |
| SMART |
RRM_dom (IPR000504) - T[97-164] 2.5E-18 - T[171-240] 4.2E-9 |
| Pfam |
RRM_dom (IPR000504) - T[98-162] 1.7E-17 - T[172-229] 5.9E-13 |
| Pfam |
NOPS (IPR012975) - T[246-294] 3.5E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NONO_HUMAN | 54.545 % | 338 | 1.01E-111 |
| SFPQ_HUMAN | 55.921 % | 353 | 1.25E-114 |
| PSPC1_HUMAN | 59.247 % | 342 | 2.14E-112 |