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TRANSCRIPT CARD

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  1. Molecular Tool 'Ci-macho1-MO (Yagi's 25mer MO)' > 
  2. Transcript 'Moocul.CG.ELv1_2.S11...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S112045.g12217.01.t

Possible name(s)

RPAP2

Gene model

Moocul.CG.ELv1_2.S112045.g12217

Location

S112045 [44,797 / 48,216]

Sequences

Amino acid sequence

Length: 485

>Moocul.CG.ELv1_2.S112045.g12217.01.p
MHLASLSSRGGRCGVKLMDEHGNDVYTKIQTYTWTKTYPPNGYKLEIGTGGSLNSTVDLV
VVATSSNNLYETMNDKKKSTEDKKKTVQQMKEADRKSKQYVEELLDTGDIKKIEEILMKI
KFITPSQYKDVVEERSIINNCGYPLCGNKLESTPKQKYLIRENKVFDITERKMFCSNKCY
ESSATLQSKVPTTALWLRDKENDIMLSQDVSGKHGEEVELLSKISKEVLNDLKNDRMKKV
VTFQEENDIMIKEDEAVIKDDNRKSDNKNNATASKEEKKPFQINSVKPKLAHSPKPSDYY
QMSLKTMNEWMTRSTLEYLGLQKKETAIEEICNEKKLEELNDYKMKVEQFFKGNYVTIKP
EERKKKKIEVKENSNLSDVQLPTVDNVSQMRIRRKILHQRLSGYATSIIPVLGMHAPSLL
HEFRQLIATFQLSSANTMLQQPQLPIVTRLKSSENAFNKLLKAFHVNMNQLHKDVDMQLM
NSIIP

Nucleotide sequence

Length: 1,458

>Moocul.CG.ELv1_2.S112045.g12217.01.t
ATGCATTTGGCAAGCCTGTCGTCTCGAGGAGGTCGGTGTGGTGTAAAGTTGATGGATGAA
CACGGAAATGATGTATATACAAAGATCCAAACTTATACCTGGACCAAAACATATCCTCCA
AATGGATACAAATTAGAAATTGGTACTGGGGGTTCGTTGAACTCTACAGTAGACCTAGTC
GTAGTCGCCACTTCATCTAATAACTTATACGAAACAATGAATGACAAAAAGAAATCTACG
GAAGATAAAAAAAAGACTGTGCAACAAATGAAAGAAGCAGATCGAAAATCAAAGCAATAT
GTCGAAGAATTGTTGGATACGGGGGATATCAAAAAAATAGAAGAAATTCTCATGAAAATA
AAATTTATTACACCAAGTCAGTATAAAGATGTTGTGGAAGAAAGATCAATTATAAATAAT
TGTGGCTATCCACTGTGTGGAAATAAACTTGAATCAACGCCAAAGCAGAAGTATTTGATA
CGCGAAAACAAAGTGTTTGACATCACCGAAAGAAAAATGTTTTGTAGTAATAAATGTTAT
GAATCGTCCGCAACTTTACAAAGTAAAGTTCCAACTACTGCACTATGGTTAAGAGACAAA
GAAAATGATATAATGTTGTCACAAGATGTCAGTGGCAAGCATGGCGAGGAGGTAGAATTG
TTGTCAAAAATTTCAAAAGAAGTTTTAAATGATTTAAAAAACGATCGTATGAAGAAAGTT
GTTACGTTTCAAGAGGAGAATGATATAATGATAAAAGAAGATGAAGCTGTCATAAAAGAT
GATAATCGTAAAAGTGATAACAAAAACAATGCCACTGCTAGTAAAGAAGAAAAAAAACCT
TTCCAAATAAATTCTGTTAAACCAAAGTTAGCACATTCTCCAAAACCGTCTGATTATTAC
CAAATGTCACTTAAAACGATGAATGAATGGATGACAAGATCAACGTTAGAATATCTCGGA
CTGCAAAAGAAGGAGACAGCAATAGAAGAAATTTGTAACGAGAAAAAACTTGAAGAATTA
AATGATTATAAAATGAAAGTTGAACAATTTTTTAAAGGAAATTATGTTACTATCAAACCC
GAAGAAAGAAAAAAGAAGAAAATTGAAGTTAAAGAAAATTCAAATCTATCAGATGTTCAA
CTACCCACTGTCGATAATGTGAGTCAGATGCGCATTCGAAGAAAAATTTTACATCAAAGA
CTTTCAGGTTACGCAACCAGCATTATTCCTGTGTTAGGAATGCATGCACCGTCGTTACTC
CATGAATTCCGACAGTTAATCGCTACGTTTCAACTATCAAGTGCTAACACAATGTTACAA
CAACCACAATTACCAATTGTCACTCGATTGAAATCATCCGAAAATGCATTTAATAAACTT
TTAAAAGCTTTTCATGTTAATATGAATCAATTACATAAGGATGTTGATATGCAATTAATG
AACTCTATAATTCCTTGA

InterProScan

Gene3D
Rtr1/RPAP2_sf (IPR038534) - T[68-242] 2.9E-28
ProSiteProfiles
Rtr1/RPAP2 (IPR007308) - T[118-199] 21.619
Pfam
Rtr1/RPAP2 (IPR007308) - T[122-190] 1.1E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RPAP2_HUMAN 45.57 % 130 1.8E-32