- Transcript 'KH2012:KH.C1.1233.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S112652.g12504.01.t
Possible name(s)
LRRC30; MFHAS1; SCRIB
Gene model
Location
S112652 [19,702 / 22,849]
Amino acid sequence
Length: 352
>Moocul.CG.ELv1_2.S112652.g12504.01.p
MANIKRKTFIPPMPVEVNVVGVEDDELDTPEMKTYKANSKQHEATQPYNTLPPIPDVEKN
ENYELPERSKSDRSVYGQRKRYTAVEMPRNRNFNFSRDTKHSIGPNTAPVKSLLPVHGVK
SLKVTGLQLKALPKYLFRMSDLETLHLSPERSACLEYKLQRVPKEIGNLHKLQTLVLDTN
ELQTIPPEISLLQNLKALTLSNNCLTELPLFFNKLQKLQSLHLSNNRFTEFPIDICDLKN
LVFLDIGDNSIREVPAKIDNLSSLTTFILYLNDIEELPDNFCGLEELTTLWLGNNRLTKL
PVNFGMLQHLDWELEPCSANIDGNPLTSPPSHVCREGVAAIKQYFNSNKNRP
Nucleotide sequence
Length: 1,059
>Moocul.CG.ELv1_2.S112652.g12504.01.t
ATGGCGAATATTAAAAGAAAAACGTTCATTCCTCCGATGCCAGTTGAAGTGAATGTTGTT
GGTGTTGAGGATGATGAATTAGATACGCCGGAAATGAAGACATACAAAGCTAACAGCAAA
CAGCACGAAGCTACACAACCTTACAATACTTTGCCACCGATACCAGATGTAGAAAAAAAT
GAAAATTATGAACTTCCAGAACGTTCGAAAAGTGACAGAAGTGTCTATGGGCAACGGAAG
CGTTATACTGCCGTTGAAATGCCACGAAATAGAAACTTTAACTTCAGTAGAGATACGAAG
CATTCTATCGGCCCCAACACAGCACCAGTGAAGTCACTTCTCCCAGTCCATGGTGTGAAA
AGTTTGAAAGTGACTGGTCTTCAATTAAAAGCCTTGCCGAAATATCTTTTCCGAATGTCT
GATCTGGAGACATTGCATTTAAGCCCGGAACGATCAGCATGTCTGGAGTACAAACTTCAA
CGAGTTCCAAAGGAAATTGGAAATTTACATAAACTACAAACTCTGGTTCTGGATACAAAT
GAACTTCAAACAATTCCGCCAGAAATCTCATTATTACAAAACTTAAAAGCACTCACTCTC
AGCAACAACTGTCTCACAGAACTTCCTCTCTTCTTTAACAAACTGCAAAAGCTTCAAAGT
TTACACCTTTCGAATAACAGGTTTACGGAATTTCCGATTGATATTTGCGATTTGAAAAAT
TTGGTTTTCCTCGACATTGGAGATAATTCCATTCGCGAAGTTCCCGCCAAAATCGACAAC
TTGTCATCTCTTACGACTTTTATACTTTACCTGAATGACATCGAAGAACTTCCAGACAAT
TTTTGTGGACTTGAAGAACTGACAACTTTGTGGTTAGGAAACAACAGACTGACGAAACTT
CCTGTTAATTTTGGAATGCTTCAACACCTTGATTGGGAACTTGAGCCATGTTCTGCAAAC
ATTGATGGCAATCCTCTTACCAGCCCACCATCGCATGTTTGCAGAGAAGGTGTGGCTGCA
ATTAAACAGTATTTTAACAGTAATAAAAACAGACCATGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[107-225] 2.3E-21 - T[226-347] 1.2E-24 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[169-191] 5.9 - T[192-213] 6.2 - T[215-237] 7.0 - T[238-260] 23.0 - T[261-283] 14.0 - T[284-306] 0.3 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[171-228] 4.5E-9 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[171-192] 7.473 - T[194-215] 7.581 - T[217-239] 7.188 - T[240-262] 6.18 - T[263-284] 5.063 - T[286-307] 7.535 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SCRIB_HUMAN | 34.973 % | 102 | 8.91E-24 |
| MFHA1_HUMAN | 36.123 % | 116 | 1.64E-28 |
| LRC30_HUMAN | 31.915 % | 108 | 4.7E-27 |