- Transcript 'KH2012:KH.C7.159.v1....' >
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- Transcript 'KH2012:KH.L170.59.v1...' >
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- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113319.g12823.01.t
Possible name(s)
LRP5; LRP6
Gene model
Location
S113319 [19,008 / 33,257]
Amino acid sequence
Length: 1,604
>Moocul.CG.ELv1_2.S113319.g12823.01.p
MEFILLFIIITVTLANDRAPNPCQPNNGGCSHLCLLSPYAPYFTCACPTGIKLKSDMKTC
EDRVQKMLLLARRPDLRMISLDTEDYTDLVLPMPDIHNCVAIDYDPVEGFVYWTDYKEPA
IKRAKLDGTRQENIITKNFNLSDGIAVDWVAGNLYWTDVERQYVAVSRLNGTSQKYLITE
TIEKPRAIVVDPIQGYMYWSDWGNVSKIERSYLDGTNRSVLVDTEIGWPNGLAIDFVNEK
LFWAEAKLDRIECMNLDGTDRRVLLHDEHIIPHVFGFSFLDGVLYWTDWQRRRVEMMDVS
SNKTKLIIDQLPDLMGLKAVSSTPIAGTNPCANSNGGCSHLCLYTPKGPQCHCPTGMEIL
SDMKSCIEPDAFLLYLLYNSPDVHMYSLETAQGVNTEIPFREKVSPSLIDFTAHDSRVYW
GDLTQKKIFRSFLNGTKLETVVDLGYQNVESMAVDWLSGNIYWVNFPSRPHIEVMKIGTN
SRRTIVWEGLDIARCLALDPENGYFYWSEWGEPGGIKRAEMDGSNVMTLVAKKHTERSNT
LTIDFEQERLYWVGIDTGIVKSTNLQGGDIETVIVEQKMEKIYTMSIFKDFIYYSDTDSL
TIKRADKLTGLNRTVVAEQKQVDDMKVYHVSRQQGLSLCMFDNGGCQHLCFPTPGGGHKC
ACPSHYSLNRDNTSCSPPDNYILLSQGIQLSQISIDESAENAEPGILPIHDLSGACTIDV
DVVRGFVYWLNCDDNEIYRAKRDGTKKSLVFPNEAFMGRKVVDFKVDGYNGYLLWSDDSY
KISITRLDNHVNGTIVQGVETASVGGHDVFLLPRKIAISPKHSLLFFTNAPTKTREDHIS
IVKASYSGSITDIFFERQLNDVDAITVDEEEERIYFTNRRIIEQCGFNGRKRRKTVGDEI
NQPIALGVANSVLYWVDKQDEEKCTIEKLESGKQKTIVQSRIEHLNALAVVSSIKGKDLG
DYLCNTDNGGCSHICLNQKDGTTSCACPNNLKIINDNTCGQPPTCAPGQFTCEHFHPDYP
PCVPYSWVCDGDEECYKGSDEKNCRICELSTSFVCGSNVDTQEDEISHLAGGILGMVADN
SLEGLQCVSNKLLCDGHKDCLDGSDEKKCPRGCQSNEFACSDGSGCIMMSQTCDDKFDCA
DGSDEKTKNCKENEDSDNSQLIPIGLTTLGGVVLFIIGLFLFKKYRSTDRHRGRHRVLTV
TDANTNMDLRVTYNVPEGINVVDHNGHRQHLANKKGGGHHSTSINLSIGHSSQRVPMVNA
QMPHAGFVPGNYPAGAGYDPGFPGDNFPLHERPHIPGASSSGSSTKYSSVTKQYLPTLNP
PPSPATDRSGSKSTGEGFYSSDSQSGRSCRCRSHRQSRRNCHHRGHPSTPCTSDTCDDFS
YHSSASGDCRHLPSKSGRPSSPPPPYCPHCCYMCHYHSGHMHGGYPCPPMSYHSHSSHRY
HGYTSSSSSSQAIVPSETGSCTRSCHHKRHHHKHRHRHPPPAYNVMSSDLNSDTDPFAPP
PTPRSQYLSDCCQTHDEDENTNIGADVVNTVEEEEPGEGSALLDNEQTSQADTEPTVVDG
RLSESETANEEEAILLTSRATSPSLTEHSYRIFNPPPSPATDSS
Nucleotide sequence
Length: 5,153
>Moocul.CG.ELv1_2.S113319.g12823.01.t
ATGGAGTTTATTCTATTATTTATCATTATCACTGTGACCTTAGCAAATGACAGAGCACCG
AACCCATGTCAACCAAACAATGGCGGCTGCTCACACTTGTGCCTCTTGTCACCGTACGCT
CCGTATTTTACTTGTGCTTGTCCGACCGGGATAAAACTAAAATCCGACATGAAAACATGT
GAAGATCGCGTTCAAAAGATGCTTTTGTTGGCACGACGACCAGATTTACGCATGATTTCA
CTCGACACGGAAGATTACACGGACTTGGTGTTGCCAATGCCAGATATTCATAATTGTGTT
GCTATCGACTACGATCCCGTGGAAGGATTCGTTTATTGGACGGATTACAAGGAGCCTGCG
ATTAAACGAGCAAAACTTGACGGCACACGTCAAGAAAATATCATAACAAAGAATTTTAAT
TTATCGGATGGAATCGCTGTGGATTGGGTGGCTGGCAACTTGTATTGGACCGATGTAGAA
CGACAGTATGTGGCCGTGTCACGCTTGAATGGAACCTCGCAGAAATATTTAATCACAGAA
ACCATCGAAAAACCACGAGCGATTGTGGTGGACCCCATACAAGGGTACATGTACTGGAGC
GACTGGGGTAACGTTTCAAAGATTGAGCGGTCATATTTGGATGGTACGAATCGATCAGTT
TTGGTGGACACTGAGATTGGATGGCCAAATGGTCTTGCAATTGATTTTGTGAATGAGAAG
TTGTTTTGGGCGGAAGCTAAGTTGGATCGGATCGAATGCATGAATTTGGATGGAACGGAT
CGGCGTGTGTTGCTTCATGACGAACATATCATACCACATGTGTTCGGCTTCAGCTTCTTG
GACGGCGTGTTATACTGGACAGACTGGCAACGAAGACGTGTTGAAATGATGGACGTCAGT
AGCAACAAAACCAAACTCATCATCGACCAATTGCCAGATTTGATGGGTTTAAAAGCCGTC
AGTTCAACACCTATTGCAGGAACGAACCCTTGTGCAAATTCAAATGGTGGATGTTCACAT
CTATGCCTTTATACTCCAAAGGGACCACAGTGCCACTGTCCTACCGGTATGGAAATTTTA
TCTGATATGAAGTCATGTATCGAACCGGATGCCTTTCTACTGTACCTGTTATACAATTCA
CCGGATGTTCATATGTATTCACTCGAAACTGCGCAAGGCGTCAACACGGAAATTCCGTTT
CGAGAGAAAGTTAGTCCGAGTTTGATCGACTTCACAGCGCACGATTCAAGAGTTTATTGG
GGAGATCTCACGCAGAAGAAAATTTTCCGTTCATTTTTAAACGGCACAAAACTGGAAACT
GTTGTTGATCTTGGATATCAGAATGTTGAAAGTATGGCTGTGGATTGGCTCAGTGGAAAC
ATATACTGGGTCAACTTTCCATCACGACCACATATTGAAGTCATGAAAATTGGAACGAAT
AGCCGCCGGACGATTGTTTGGGAAGGACTGGACATTGCAAGATGTCTTGCGCTTGACCCG
GAAAATGGATATTTCTATTGGTCCGAATGGGGCGAACCGGGTGGTATAAAACGTGCTGAA
ATGGACGGTAGCAACGTAATGACCCTTGTTGCTAAGAAACATACAGAACGGTCAAACACA
CTGACCATTGACTTTGAACAAGAAAGATTGTATTGGGTTGGAATTGATACTGGAATTGTA
AAAAGTACAAATTTACAAGGTGGTGATATTGAGACAGTAATTGTTGAACAGAAGATGGAA
AAGATTTACACAATGTCTATATTCAAAGATTTCATTTACTATTCTGATACTGACAGTCTG
ACAATCAAACGTGCTGATAAACTCACTGGCCTTAATAGGACTGTTGTTGCTGAGCAAAAG
CAAGTTGATGACATGAAAGTATACCACGTATCTCGACAACAGGGTCTGTCGTTATGCATG
TTCGACAATGGGGGTTGTCAACATTTATGCTTCCCAACACCAGGTGGCGGTCACAAGTGC
GCTTGTCCTTCTCATTATTCACTCAACCGCGACAATACTTCATGCTCACCTCCCGACAAC
TACATTCTGCTATCGCAAGGAATCCAACTGAGCCAGATATCAATTGATGAATCAGCAGAA
AATGCTGAACCTGGTATTTTGCCGATTCATGATTTAAGCGGAGCATGTACTATCGATGTG
GATGTCGTGAGAGGTTTTGTGTATTGGTTAAATTGCGATGACAATGAAATATATCGCGCC
AAACGAGATGGAACGAAGAAATCACTCGTTTTTCCAAATGAAGCTTTTATGGGACGTAAA
GTAGTGGACTTCAAAGTGGACGGTTACAACGGCTACTTGCTATGGTCAGATGATTCATAT
AAGATCAGTATAACACGTTTGGACAACCATGTTAATGGCACGATCGTCCAAGGTGTTGAA
ACAGCAAGTGTTGGAGGACATGATGTGTTCCTGCTTCCACGGAAGATTGCAATTTCACCA
AAACACAGTTTGTTGTTCTTCACGAATGCGCCTACGAAGACACGTGAGGATCATATCAGC
ATCGTGAAGGCATCCTACAGTGGAAGTATCACCGACATCTTCTTCGAGAGACAATTAAAC
GATGTAGATGCGATTACAGTTGATGAAGAAGAGGAGAGGATTTACTTTACGAATCGCCGC
ATCATCGAACAATGCGGATTCAACGGAAGAAAACGAAGAAAGACTGTCGGCGATGAAATC
AATCAACCGATCGCTCTCGGTGTCGCTAACTCCGTACTTTATTGGGTCGATAAACAAGAT
GAAGAGAAATGCACAATTGAAAAACTTGAATCTGGCAAACAAAAGACAATCGTACAAAGT
CGAATCGAACATCTCAACGCGTTGGCAGTCGTCAGTTCGATTAAAGGAAAAGATTTAGGT
GATTATCTCTGCAACACGGACAACGGTGGATGTTCTCATATATGTCTCAATCAAAAAGAC
GGGACGACAAGTTGCGCTTGTCCGAATAACTTGAAGATCATAAACGATAATACTTGTGGT
CAACCACCAACGTGTGCTCCGGGGCAATTCACGTGCGAACATTTTCATCCGGACTATCCT
CCGTGTGTTCCGTACTCGTGGGTGTGCGACGGAGATGAAGAATGTTATAAAGGAAGCGAT
GAAAAGAATTGTCGGATCTGTGAACTCAGTACAAGTTTTGTATGTGGCAGCAACGTTGAC
ACGCAGGAAGATGAGATATCACATCTGGCTGGTGGTATCCTCGGTATGGTCGCTGATAAC
AGTTTGGAAGGTCTTCAATGTGTTTCAAATAAACTGCTTTGCGACGGACATAAAGATTGT
TTGGATGGTTCCGATGAAAAGAAATGTCCGCGAGGTTGTCAGTCGAATGAATTTGCATGC
AGCGATGGTTCCGGTTGCATTATGATGTCACAAACGTGCGATGATAAGTTCGATTGCGCT
GACGGTTCAGATGAGAAAACAAAAAACTGCAAAGAAAATGAAGACAGTGACAACTCTCAG
CTTATACCGATTGGTTTGACAACATTGGGTGGAGTGGTGCTATTCATTATAGGACTTTTC
CTCTTTAAGAAATATCGGTCAACGGACCGGCACCGCGGACGGCACAGAGTTTTAACAGTG
ACTGATGCCAACACCAACATGGACTTGCGTGTCACGTACAACGTACCTGAAGGTATCAAT
GTGGTCGATCATAATGGACACAGACAACACTTGGCCAATAAGAAAGGTGGTGGACATCAT
AGCACCAGTATTAACCTTTCAATTGGTCATTCATCACAACGAGTACCAATGGTCAACGCA
CAAATGCCCCATGCAGGTTTTGTGCCGGGAAATTACCCTGCGGGTGCGGGATATGATCCT
GGTTTCCCTGGTGATAACTTCCCTCTCCATGAACGACCTCATATTCCTGGTGCATCATCA
AGTGGCTCCAGCACAAAATATAGTTCAGTTACAAAACAATATTTACCGACATTAAACCCA
CCTCCATCGCCTGCAACTGACAGATCCGGTTCAAAAAGTACAGGTGAAGGTTTTTACTCA
TCTGACAGCCAATCAGGTCGATCATGCAGGTGTCGCTCACACAGACAAAGCAGGAGGAAT
TGTCATCATCGCGGACATCCATCTACTCCATGTACATCGGATACTTGTGACGATTTCTCT
TATCACAGCAGCGCTAGCGGAGATTGCAGACATTTACCATCCAAATCTGGTCGGCCATCA
TCTCCGCCACCTCCATACTGCCCACACTGCTGTTACATGTGCCACTACCACTCTGGACAC
ATGCATGGTGGATATCCATGCCCGCCGATGTCCTATCACTCACATTCATCTCACCGTTAC
CACGGTTACACATCAAGTTCGTCGAGTTCGCAAGCGATCGTTCCGTCGGAAACCGGATCA
TGCACACGTTCATGCCACCACAAGAGGCATCATCACAAACATCGACATCGTCATCCTCCG
CCGGCTTACAATGTAATGTCGTCCGATCTCAACTCGGATACCGATCCATTTGCTCCTCCA
CCAACACCTCGCAGTCAATATCTGTCCGACTGCTGTCAAACACACGACGAGGATGAAAAC
ACGAACATCGGCGCAGACGTCGTTAATACTGTTGAAGAGGAGGAGCCAGGTGAAGGTTCC
GCCCTCTTAGACAACGAACAAACTTCACAGGCCGATACCGAACCTACGGTCGTGGATGGT
CGATTATCTGAATCTGAAACGGCCAATGAGGAAGAAGCTATTTTACTGACGTCACGAGCT
ACTTCGCCATCGTTAACTGAACATAGTTATCGTATTTTTAACCCACCACCATCGCCAGCT
ACAGATTCCTCATAAACATTTATCGTGGCACTTATGCTTTATGTTTGCATTCGACTCTGC
CAATATTCGTAACCAGGCACAGTTGTTAAGTGCCTTTATACACTTGCCTTATTTCCGCCT
TCTTATACATCACTCACTTTACCGACCAATCATTGTTGTATTTTATTTTTTTGTTATTTC
AAGCACTAAGTACAAAAGAGGCCAACTGCTTCCAAGGTGTACAATATTTTCCCTTTGACC
TCACACATATAAGCTATATTTATCGTTGTATGTTACTTTTACTTGCTGACTAATGGTACC
TACTACTTTTGCAATTTTATAAGAAACTAAATAAATTTGTATAAATATTTTAA
| SMART |
EGF-like_dom (IPR000742) - T[22-61] 0.55 - T[330-367] 0.028 - T[638-676] 0.61 - T[963-1000] 32.0 |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[58-367] 9.5E-124 - T[368-664] 5.2E-84 - T[665-1003] 3.5E-62 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[87-131] 1.1E-7 - T[132-174] 6.1E-9 - T[175-218] 2.9E-13 - T[219-261] 2.0E-14 - T[262-304] 2.1 - T[397-438] 1.6 - T[439-482] 5.8E-5 - T[483-526] 1.1E-7 - T[527-570] 2.1 - T[572-613] 7.7 - T[705-747] 1.3 - T[852-892] 0.057 - T[893-934] 140.0 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[109-151] 14.82 - T[152-194] 14.704 - T[195-238] 16.305 - T[239-281] 12.082 - T[282-326] 8.044 - T[416-458] 12.407 - T[459-502] 9.854 - T[503-547] 11.131 - T[548-591] 7.928 - T[725-770] 7.279 - T[771-797] 4.889 - T[823-871] 5.144 - T[872-908] 6.095 - T[911-954] 7.928 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[109-149] 5.4E-8 - T[152-192] 2.4E-10 - T[195-235] 6.5E-10 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[1002-1045] 6.94E-8 - T[1086-1109] 4.97E-6 - T[1112-1148] 1.96E-7 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[1004-1044] 1.1E-9 - T[1086-1109] 3.7E-7 - T[1113-1150] 2.0E-8 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[1004-1046] 2.8E-10 - T[1079-1111] 0.0082 - T[1112-1152] 2.3E-10 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[1004-1045] 12.713 - T[1046-1110] 11.075 - T[1112-1151] 12.25 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[1005-1044] 2.22304E-8 - T[1086-1109] 1.02599E-6 - T[1113-1150] 2.05552E-8 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[1020-1041] 1.9E-17 - T[1085-1106] 1.9E-17 - T[1124-1145] 1.9E-17 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[1126-1150] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP4_HUMAN | 33.734 % | 567 | 4.02E-172 |
| LRP6_HUMAN | 38.874 % | 972 | 0 |
| LRP5_HUMAN | 40.847 % | 914 | 0 |