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  1. Transcript 'Moocul.CG.ELv1_2.S11...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S113418.g12877.02.t

Possible name(s)

DST; SYNE1; SYNE3

Gene model

Moocul.CG.ELv1_2.S113418.g12877

Location

S113418 [99,086 / 102,377]

Sequences

Amino acid sequence

Length: 609

>Moocul.CG.ELv1_2.S113418.g12877.02.p
MATKNELVQKLAEWQQFESAKEELLSWMAENKAVLSGSLASAVDLKDKESHLDKYRLILE
DIVTHKDMVDICHEKAQDLNQEFNMQLYQEIVAMAKERVDFLESSVQLHEKYYDSVQDFS
SWINSAKEELHRWFDMEGSKEAVKKKLGKIQVKDISCVCSKTVTMREETFIQIIHRLRHV
LHHLQTLKTTRAHGRFKLDTLLEIGEQVLINTAEEGRGVLKAEIESLKDEWKSWDRNLIE
AEISLESRLSQLSQYEESFEVEKNNLKDTLMSFIQQLDELQEQITSETDVDISKPVKAAA
VLKACKNLRNSFDGMQESENTLKARLNSLCRSYHGSEINEISTEVTDALKRSDSMKLHLD
KLSSDAEKSLMESFHVLLKDFDGWLRSKKELVQGLGEISGNKTAVKNKLHHLQAFLSNME
EGQVKLSSLTTSGETLITVLTPEVGDEIKQQMKKHKDAWKHFLILVQEREQALSSFLEQL
TDFENSIEELSRWQKETNEKYEAEAGLKSTLGLKKSQYNSLQSMAESISDNVYKFERLKR
KAHKLGSSNELTKLNQLTTSHEALSKKIMEALKQSEQHHRHHQEYQNMLTESQEWLRDFK
HRLDTYSNI

Nucleotide sequence

Length: 1,867

>Moocul.CG.ELv1_2.S113418.g12877.02.t
CGAATTAAAAGAACTACACGACCAGCTGCTGTCGAAGTTGATGGCAACAAAGAATGAGTT
GGTGCAGAAGTTAGCAGAGTGGCAACAGTTTGAATCTGCAAAAGAAGAATTGCTGTCGTG
GATGGCAGAGAACAAAGCTGTTCTTTCCGGTTCATTGGCATCAGCTGTTGATTTGAAAGA
CAAAGAATCACATTTGGATAAATACAGGTTAATCCTTGAAGATATCGTAACTCATAAAGA
TATGGTTGATATCTGTCACGAGAAGGCACAGGACCTGAATCAGGAATTCAACATGCAGCT
CTACCAAGAGATTGTTGCCATGGCAAAGGAGCGTGTTGATTTTCTTGAATCTTCGGTTCA
ACTTCACGAGAAGTATTACGACTCCGTGCAAGACTTCAGTAGTTGGATAAACTCGGCGAA
GGAAGAGTTGCATCGATGGTTTGATATGGAAGGAAGCAAAGAAGCTGTAAAGAAGAAACT
TGGAAAGATTCAGGTGAAAGATATTTCATGTGTTTGCAGTAAAACTGTTACGATGAGAGA
AGAAACATTCATTCAAATTATACATCGTTTACGCCATGTTCTTCATCATTTGCAGACTCT
GAAAACTACTCGAGCTCATGGTCGTTTCAAACTGGACACTTTATTGGAAATTGGAGAACA
AGTCCTCATCAACACCGCCGAAGAAGGAAGGGGCGTGTTGAAGGCGGAGATTGAAAGTTT
GAAAGATGAGTGGAAATCGTGGGATCGAAATCTGATTGAAGCAGAGATTTCCCTCGAATC
TCGTTTGTCGCAATTATCGCAGTACGAGGAAAGTTTTGAAGTGGAAAAGAATAATTTGAA
AGATACTTTGATGAGTTTCATCCAACAACTTGATGAATTGCAAGAACAAATAACATCGGA
AACGGACGTGGACATTTCAAAACCTGTCAAAGCTGCTGCGGTGTTGAAAGCGTGCAAGAA
CTTGAGAAATTCATTTGATGGAATGCAGGAGAGCGAAAACACACTGAAAGCTCGTTTAAA
TTCCCTCTGTCGAAGTTATCACGGTTCAGAAATCAATGAAATATCAACGGAAGTAACTGA
TGCTCTCAAACGGTCCGACAGCATGAAACTTCACTTGGACAAACTTTCAAGCGACGCTGA
GAAAAGTTTGATGGAATCGTTTCATGTTTTGTTGAAAGATTTTGATGGATGGCTTCGTTC
AAAGAAAGAACTTGTGCAAGGTCTTGGAGAGATATCTGGCAATAAAACAGCAGTCAAAAA
CAAACTACACCATTTGCAGGCTTTTCTGTCTAACATGGAAGAAGGTCAGGTTAAACTGAG
TAGTTTGACGACAAGCGGGGAGACACTAATAACCGTACTTACTCCTGAAGTCGGAGATGA
AATCAAACAACAAATGAAAAAGCATAAAGATGCCTGGAAACATTTTCTTATTCTTGTCCA
AGAACGTGAGCAGGCATTAAGCAGTTTCTTGGAACAATTAACGGACTTTGAAAACAGCAT
CGAAGAACTTTCACGCTGGCAAAAAGAAACAAATGAAAAGTATGAAGCTGAAGCGGGCCT
CAAATCAACTCTTGGATTGAAAAAGTCGCAATATAATTCACTGCAGTCAATGGCGGAGTC
GATATCTGACAACGTTTACAAGTTTGAAAGATTGAAACGAAAAGCACACAAACTCGGAAG
CTCAAATGAACTCACAAAATTAAATCAACTTACAACAAGTCATGAAGCGTTGTCTAAGAA
AATTATGGAAGCACTGAAGCAGAGTGAACAACATCATCGTCATCATCAAGAGTATCAAAA
CATGCTCACGGAATCACAGGAGTGGCTGCGAGATTTCAAACATCGACTCGACACTTACTC
TAATATT

InterProScan

PANTHER
SYNE1 (IPR030265) - T[3-151] 1.3E-75 - T[180-283] 1.3E-75 - T[268-606] 1.3E-75
Pfam
Spectrin_repeat (IPR002017) - T[13-82] 4.0E-6 - T[370-473] 9.9E-9
SMART
Spectrin/alpha-actinin (IPR018159) - T[15-114] 0.31 - T[372-474] 3.3E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SYNE1_HUMAN 26.324 % 184 6.61E-49