- Transcript 'Moocci.CG.ELv1_2.S14...' >
- Transcript 'KH2012:KH.L18.139.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113631.g12969.01.t
Possible name(s)
SOX14; SOX2; SOX21
Gene model
Location
S113631 [19,916 / 21,655]
Amino acid sequence
Length: 412
>Moocul.CG.ELv1_2.S113631.g12969.01.p
MLAVDSQATGAGWMQMPGYQQGGVLPPPPVVSGTDGNGQMLHQMDVKPVYAPTSEQMSPV
MSHMQHLVPAQMQQQAQNTNSKAAQEQRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEIS
KRLGAEWKLLTDSDKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKNMLKKDKYGASVMPQ
SSLSQASPPIRSHLSAGLDGYGHGFGGYPAPHVMQHDALTAYNAQQYGAPSTQGGQMPPR
YEVYPYSSYSTATSLPSMANMTAHPQHAASNGYPIHPTYAPLPATPPYSHMSPHSAIPVG
SQSGSSTGVKSPSGSSPEATTPGPQNETSPIQNHPINMSQSHAAPGQTQHGAPIQSMISM
YLPHGDPNAGALPPQEEGSPDAVPLVHQQQYSAMVTAAGIQMHHMQPHYAHN
Nucleotide sequence
Length: 1,239
>Moocul.CG.ELv1_2.S113631.g12969.01.t
ATGTTGGCTGTTGACTCTCAAGCTACTGGTGCCGGCTGGATGCAAATGCCTGGATATCAA
CAAGGAGGGGTCCTTCCACCACCCCCAGTTGTGTCAGGAACTGACGGCAACGGACAAATG
CTTCACCAAATGGATGTGAAACCCGTGTATGCCCCAACATCGGAACAAATGTCACCAGTG
ATGAGCCACATGCAACATCTTGTACCAGCTCAAATGCAACAACAAGCACAAAATACAAAC
AGCAAAGCTGCACAGGAACAGAGAGTGAAACGACCAATGAATGCTTTCATGGTTTGGTCA
CGTGGTCAACGACGAAAGATGGCACAAGAAAACCCCAAAATGCATAACTCAGAAATCTCG
AAAAGACTCGGAGCAGAATGGAAGTTGCTTACTGATTCCGACAAACGTCCTTTCATCGAT
GAAGCCAAAAGACTTCGCGCCCTCCACATGAAGGAACATCCCGACTACAAATACCGACCA
CGACGAAAGACCAAGAACATGTTGAAGAAAGACAAATATGGAGCCAGTGTAATGCCACAA
TCCTCCCTCTCACAAGCATCCCCTCCAATCCGATCCCATTTGTCAGCTGGTTTGGATGGA
TACGGTCATGGTTTCGGTGGATATCCTGCACCACATGTAATGCAACACGACGCTCTCACA
GCTTACAACGCACAGCAATATGGCGCGCCATCTACACAAGGCGGTCAGATGCCACCGAGA
TATGAAGTCTATCCATACAGCAGCTACTCTACTGCAACATCACTACCAAGTATGGCTAAC
ATGACAGCTCATCCACAGCATGCAGCTAGCAACGGCTATCCAATCCACCCCACATACGCT
CCCTTGCCCGCCACCCCTCCCTACTCCCACATGTCGCCACATAGCGCAATCCCAGTAGGC
TCACAATCAGGAAGCAGCACCGGAGTAAAATCTCCATCTGGTTCCAGCCCAGAAGCCACC
ACTCCCGGTCCACAAAATGAAACAAGTCCGATCCAAAACCACCCGATCAATATGAGCCAA
TCCCACGCCGCACCTGGTCAAACCCAACATGGAGCTCCCATCCAGAGCATGATCAGCATG
TACCTCCCTCATGGCGACCCAAATGCAGGCGCCCTCCCACCACAAGAGGAAGGAAGCCCG
GATGCTGTTCCGTTAGTTCACCAACAGCAATACTCTGCAATGGTTACAGCAGCGGGAATT
CAAATGCACCACATGCAACCACATTATGCTCATAATTAA
| SUPERFAMILY |
HMG_box_dom_sf (IPR036910) - T[80-161] 1.06E-27 |
| Gene3D |
HMG_box_dom_sf (IPR036910) - T[86-164] 1.7E-31 |
| SMART |
HMG_box_dom (IPR009071) - T[88-158] 2.3E-28 |
| Pfam |
HMG_box_dom (IPR009071) - T[89-157] 2.7E-27 |
| ProSiteProfiles |
HMG_box_dom (IPR009071) - T[89-157] 22.881 |
| Pfam |
SOX_fam (IPR022097) - T[158-241] 1.3E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOX2_HUMAN | 91.86 % | 178 | 8.79E-53 |
| SOX21_HUMAN | 87.64 % | 171 | 1.49E-50 |
| SOX14_HUMAN | 79 % | 171 | 5.0E-51 |