- Transcript 'KH2012:KH.C9.247.v2....' >
- Transcript 'KH2012:KH.S595.1.v2....' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113966.g13274.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S113966 [7,213 / 24,060]
Amino acid sequence
Length: 2,000
>Moocul.CG.ELv1_2.S113966.g13274.01.p
MKLKWRYKVSMLLLLISICTWIKYGTATIIIPPDTAQTCSSSEFECASGDQCIDSRYQCD
RDLDCPDDSDEVECLYECSEGEFKCGNRRCISFHNRCDGMNDCGDNSDELECSIPLEPCL
PGEFQCAVVKTCISISWRCDGDRDCDDNSDEENCNMCSVGQFQCAESKRCIRLTWRCDGD
VDCLDKSDEKDCGVCAEDQFQCQDGTQCIGMHKICNGQYDCKDHSDEAPVHQCNGTQYGT
NDTSCTHDNAGCEQFCRDTKYGPICVCNVGYELAEDQKSCVDINECNTEGSCSQGCNNTI
GGYLCTCMDGYTLRPDERTCKANPPEPYLFFANRIDIRKMQTDRSEFKPILENLNNAIAL
DYHIKKNLMYWSDVSLDSIKCSFVNGSGVKEVVHTGLESPGGVSVDWIHDLLYWTDSGTS
RIEVSLLGGEHRKVLIWEELEKPRAIALHPIEGLMFWTDWGVTPQVESAAMDGSQRRTLA
NTNLLWPNGLTLDYTSNHIYWVDAKYLIIERANLDGTGRKVIVSEGLRHPFSITIFEDKL
YWTDWKTKSINSVNKFTGTDVRTVKNHLHFPMGIQTYHPQRQPLADNKCLTSGCSHLCLP
KPSGFTCDCETGFTLVNETHCSDEIKEFLIFTKKEEIRRISFDARDRTDTVLPLKKLQNT
MAIDWDSKYPGHIYWTDLTNDTINKAQWDGSQQKTIISSSLDSPTGIAVDWITGKLYWAD
DGMDRIEVALLDGSMRAVLIYKDLDHPRDIAVLPSKGMMFWTDWGHKAKIERAGMDGSGR
MEIITDHLSLPNGLAIDTETERVYWVDAGLGYISSCSLDGGHRHAVIPSNLPYPFGITLH
GDTLYWTDVVNETIFSANKFDGSNVRVVRDKLTDLMDIHYYHRNRTQSYNPCQDKNGGCS
HLCLLSPVTVAHSFINPAQVAHSCHCPTGFALDSNKKTCNTIMNKFLVIARRSDVRVISL
DVSYAADVKLSLQASLANVIDIAVDPVDAMLYWSDIGTQQIMRSNLTDLRTSEVVLKAGI
NNVDGLTIDPNTRKIYWTDAERKIVAVSELNGKNWKILIADDLDSPRAIITHYESGYLYW
TDWGRTPNIARSGMDGSNPKQIITENLMWPNGVTIDAVGNRLIWGDAHTELIESSTLEGF
DRRTLKESVRHAYSLTAMEGFLYWTDWQTRNVERLNLKNTSQIVSMRKNLINLMGIKAVS
LDRDGHERSNYCGDNNGGCTHLCLRSPVTSSGYQCACPTGIKLHADNKTCLELPEEYLLF
TSRNTIRRVSLTEDHGSYVELPIPDLENVIAIDYHYKKQKLFFTDVFLDVIRSADIDGEN
VKTIVERNLRTMDGIAVDWVADNLYWTDTGPNSISVSRLDGSCRKVLISTNLDEPRAIAV
HPTKGLMFWTDWGAKARIEKSFLDGNARKAIVDKDIVWPNGLTIDLSGDGRIFWVDAHAT
LNQIETCDLNGHGRKVVVSPVPHGFSITYLRNTLYWTDWQTHTIESSTFPHETDNRKKIL
SKVIGLMDITVVSADLQTGSSLCDSSAGYGGCKYLCLMQGANKFDCVQPDVIPPEVNDNT
TDDNDNTPSPKAPNMKPAPPAPKPPLLVPCTKPECTETKKSSSSVLPIIIGAMFVFLMIF
IVVGILLWRRMKASKQQQVAEIRVNPSCSFRNQSYTAGSQSTLLTGTSPSTPGSPQPKSN
WLSVPKLGLKSKTTIKEEEVKTLLDPQKPSNGVKGRSIVRAKNSFRKSFPGRTKYNVSNP
PDSKIKRSESNRSYHDHDSDAVFKGGLNPCKTAPADLAVEGMDEHTTVPHDIPNRMSSIS
SLHSRASDSDSISLSSLDTGTYSSDSDCAISRTNKPKKRIPGLRIFGGKGATPTKRQLRT
QHDAHPKLSVSTTHTFISVESGESDPNIHHHSNETSTSRVSTPDVLNDFDLDDTLDFDLA
NHGTNHTSHELVNGSLSDDEMQPLSASKDQVFHDDTDDDNLHGRGRKTRKYENKHDKRDS
SPSVLLKGQHLVAFGNENEV
Nucleotide sequence
Length: 6,289
>Moocul.CG.ELv1_2.S113966.g13274.01.t
TGTGTGTTAGATATCACGGAGAGAACATCGTATGCAGTCGTAAATTGCTTAGGCATTAAG
ATCAGGTTCGTGAAAGTTGTCAAAATGAAGTTAAAATGGAGATATAAGGTGTCTATGCTT
CTGCTTTTGATATCGATCTGTACTTGGATAAAGTATGGAACCGCCACAATCATCATTCCA
CCAGATACAGCCCAAACATGTTCATCGTCCGAATTTGAATGCGCTTCTGGTGACCAATGT
ATTGATTCGCGATATCAATGTGACAGAGACCTCGATTGTCCGGATGATAGCGATGAAGTC
GAATGTCTGTATGAATGCAGCGAAGGTGAATTCAAATGTGGCAACAGACGTTGTATATCT
TTCCACAACAGATGTGACGGCATGAATGATTGCGGGGATAATTCAGATGAATTGGAATGC
TCCATTCCGCTGGAGCCGTGTCTTCCTGGTGAATTCCAATGTGCGGTTGTGAAGACGTGC
ATTAGCATCTCATGGAGATGCGACGGAGATCGTGACTGTGACGATAATTCAGACGAAGAA
AATTGCAACATGTGCAGTGTGGGGCAGTTTCAATGTGCGGAAAGCAAACGATGCATTCGC
TTGACGTGGAGATGCGATGGTGATGTTGATTGCTTGGATAAAAGTGACGAGAAGGATTGT
GGCGTTTGTGCCGAGGACCAATTCCAATGCCAAGACGGAACACAATGTATCGGCATGCAT
AAGATATGCAATGGACAGTATGACTGTAAGGACCATTCCGATGAAGCCCCTGTGCATCAG
TGCAATGGAACCCAATATGGGACTAATGATACCTCATGTACGCATGACAATGCTGGATGC
GAACAGTTCTGCCGCGATACGAAGTATGGGCCGATATGCGTTTGCAATGTCGGCTATGAG
CTGGCTGAAGATCAAAAGAGCTGTGTTGACATCAATGAATGCAATACTGAAGGTTCCTGC
AGTCAAGGCTGCAATAACACGATTGGAGGTTACCTGTGTACGTGTATGGATGGCTACACA
CTACGCCCAGATGAACGAACATGTAAAGCAAATCCTCCTGAACCTTACCTCTTCTTCGCT
AACAGAATCGACATCAGGAAGATGCAGACTGATCGATCCGAGTTCAAACCTATCCTGGAG
AACTTAAACAACGCGATTGCTCTTGATTATCACATCAAGAAGAATTTGATGTATTGGAGT
GATGTTTCATTGGACAGCATCAAGTGTTCATTTGTGAACGGAAGTGGGGTTAAAGAAGTC
GTTCACACAGGCTTAGAAAGTCCAGGTGGCGTGTCTGTGGACTGGATTCATGACCTGCTG
TACTGGACAGACTCTGGCACTTCAAGAATTGAAGTCTCTCTTCTTGGGGGGGAACATAGA
AAAGTGTTGATTTGGGAGGAGCTGGAGAAGCCACGTGCAATTGCCCTTCACCCAATTGAG
GGGTTGATGTTTTGGACAGACTGGGGGGTGACACCTCAAGTTGAAAGTGCTGCCATGGAC
GGGTCACAACGTCGGACGCTGGCAAACACAAATTTGTTGTGGCCAAATGGTTTGACTTTG
GATTACACAAGCAATCATATATACTGGGTCGACGCCAAGTACCTGATTATTGAACGTGCC
AACCTCGATGGAACCGGCAGAAAAGTAATCGTCAGTGAAGGTCTTCGTCATCCATTTTCC
ATTACAATCTTCGAGGATAAACTTTATTGGACGGATTGGAAGACGAAAAGTATTAACAGC
GTCAACAAATTCACCGGCACTGACGTTCGAACGGTTAAAAATCACCTCCATTTCCCCATG
GGAATTCAAACGTATCACCCACAGCGACAACCATTAGCCGACAACAAGTGTTTAACCAGT
GGTTGCAGTCATCTTTGCTTGCCAAAACCATCAGGATTCACATGCGATTGTGAAACAGGA
TTCACTCTGGTCAATGAGACACATTGCTCAGACGAAATCAAAGAATTTTTGATTTTCACT
AAGAAAGAAGAAATTAGGCGGATTTCCTTCGACGCGAGAGACAGAACAGACACAGTTCTG
CCTCTAAAGAAACTGCAAAACACCATGGCGATTGATTGGGACAGTAAATACCCTGGACAT
ATATACTGGACAGACCTGACTAACGACACCATAAACAAAGCTCAGTGGGACGGAAGCCAA
CAGAAGACAATCATCAGTTCAAGCCTGGACTCACCTACAGGCATTGCAGTGGACTGGATT
ACTGGTAAATTGTATTGGGCTGATGACGGAATGGACAGGATAGAAGTGGCGCTTTTGGAC
GGGTCAATGCGTGCCGTGTTAATCTACAAAGACCTTGACCACCCACGCGATATTGCTGTG
CTACCGAGCAAAGGCATGATGTTTTGGACGGATTGGGGTCATAAAGCAAAGATTGAAAGA
GCGGGGATGGATGGATCAGGACGAATGGAAATAATAACTGACCATTTATCACTACCAAAT
GGACTGGCCATTGATACTGAAACAGAAAGGGTGTACTGGGTGGATGCAGGGTTGGGATAC
ATTTCATCATGCAGTTTGGACGGTGGTCATCGCCATGCGGTCATTCCAAGTAACCTGCCT
TATCCGTTTGGAATTACCCTTCATGGAGATACGCTATATTGGACAGACGTGGTCAATGAA
ACGATATTCTCAGCAAATAAATTTGATGGTTCGAATGTTCGCGTCGTTCGCGACAAATTG
ACTGATTTAATGGATATCCATTATTACCATCGAAACCGTACACAATCATACAATCCATGC
CAGGACAAAAACGGTGGCTGTTCACATCTATGTCTCCTCTCGCCTGTCACAGTGGCACAT
AGCTTTATAAACCCTGCCCAGGTCGCTCATAGTTGCCACTGCCCGACTGGTTTTGCGTTG
GATAGCAACAAAAAGACCTGCAATACAATCATGAACAAGTTCCTGGTAATCGCCCGAAGG
TCTGATGTCCGTGTGATATCACTGGATGTCTCTTACGCTGCCGATGTGAAATTGTCTCTT
CAAGCAAGCCTGGCGAATGTGATTGATATTGCTGTCGATCCTGTTGACGCGATGCTTTAT
TGGTCCGACATTGGAACGCAACAAATCATGCGTAGCAACCTCACTGACCTCCGAACTTCA
GAGGTGGTACTAAAAGCCGGAATAAATAACGTCGACGGATTAACGATTGACCCGAATACA
CGGAAGATTTACTGGACGGACGCAGAAAGAAAAATCGTAGCAGTCTCGGAATTGAACGGG
AAAAATTGGAAAATTTTAATAGCCGACGATCTTGACTCCCCAAGGGCTATTATTACACAT
TACGAATCTGGGTACCTTTACTGGACCGATTGGGGTCGAACCCCAAACATTGCAAGATCG
GGAATGGACGGGTCAAATCCTAAGCAGATTATAACAGAGAATTTGATGTGGCCAAATGGC
GTTACCATAGACGCTGTTGGCAACAGATTAATATGGGGTGACGCTCACACAGAGCTGATT
GAATCTTCCACATTGGAAGGATTTGACCGACGGACATTAAAGGAATCTGTCCGTCATGCC
TACAGCTTGACCGCCATGGAAGGATTTCTCTACTGGACGGACTGGCAGACCAGAAACGTT
GAAAGATTAAATTTGAAAAACACGTCACAGATTGTGTCCATGCGGAAAAATCTTATCAAT
TTAATGGGCATCAAAGCGGTCAGTTTGGACAGAGATGGACATGAAAGAAGCAATTACTGC
GGGGATAACAACGGTGGGTGCACACATTTGTGTCTTCGAAGCCCAGTGACGTCATCAGGG
TATCAATGTGCTTGTCCAACTGGCATTAAACTTCACGCAGACAACAAAACATGTCTCGAA
TTACCGGAGGAATATCTTTTGTTTACATCAAGAAATACAATCAGGCGTGTGTCACTGACG
GAGGATCATGGTAGCTATGTTGAGTTGCCCATACCGGACCTGGAAAACGTCATCGCGATT
GATTATCATTACAAAAAACAGAAATTATTTTTCACGGATGTTTTTCTGGACGTGATCCGA
AGTGCGGATATCGACGGAGAAAATGTAAAGACAATTGTGGAACGGAATTTACGAACTATG
GATGGAATCGCCGTGGATTGGGTGGCGGATAATTTATACTGGACAGACACTGGTCCGAAC
TCAATCTCTGTCAGTCGCTTGGATGGATCATGTCGGAAAGTTTTAATATCAACCAATCTG
GACGAACCACGGGCTATTGCTGTCCATCCTACCAAGGGGTTAATGTTCTGGACAGATTGG
GGTGCAAAAGCGAGAATTGAAAAGTCATTTCTAGACGGAAATGCCAGAAAGGCGATTGTT
GACAAAGATATTGTTTGGCCAAATGGACTGACCATTGACTTGAGCGGTGACGGGAGGATA
TTTTGGGTGGACGCCCACGCAACTTTGAATCAAATTGAAACTTGTGATTTGAACGGACAC
GGGAGAAAAGTTGTTGTATCACCTGTGCCTCATGGATTCTCTATCACTTATCTTCGAAAC
ACGTTGTACTGGACTGATTGGCAAACACACACAATTGAATCAAGCACATTTCCACATGAG
ACTGACAACAGAAAGAAGATCCTTTCAAAAGTTATCGGACTGATGGACATCACGGTCGTA
TCAGCGGATCTTCAAACGGGGTCGAGTTTATGCGATTCATCTGCTGGTTACGGAGGATGT
AAATACTTATGCTTGATGCAAGGTGCAAATAAGTTTGACTGCGTACAGCCTGATGTGATA
CCGCCAGAAGTTAACGACAACACCACTGATGACAACGATAACACACCTTCTCCAAAAGCT
CCAAATATGAAACCAGCACCTCCGGCACCCAAACCACCACTTCTTGTACCATGCACCAAA
CCAGAATGTACAGAGACGAAAAAGAGCAGTTCCAGTGTGCTGCCGATCATCATTGGAGCC
ATGTTCGTATTCTTAATGATCTTCATTGTCGTTGGAATCCTCTTGTGGAGACGAATGAAA
GCTTCCAAGCAACAACAAGTGGCAGAGATTCGTGTAAATCCTTCTTGTAGCTTCAGAAAC
CAATCATACACAGCTGGAAGCCAAAGTACCCTCCTCACTGGCACCTCACCAAGTACACCT
GGAAGCCCACAACCAAAATCAAACTGGCTGTCTGTACCAAAGCTTGGTCTCAAATCAAAA
ACTACCATCAAAGAAGAGGAAGTGAAAACCCTTCTAGATCCTCAGAAACCAAGCAATGGC
GTGAAGGGCAGGAGTATTGTGAGAGCGAAAAATTCGTTTCGTAAAAGTTTTCCAGGTCGG
ACGAAGTACAATGTTTCAAACCCTCCCGATAGCAAAATCAAACGAAGTGAAAGTAACAGA
AGTTACCACGACCATGACAGTGATGCTGTGTTTAAAGGTGGTTTGAATCCTTGCAAAACT
GCGCCTGCTGATCTGGCAGTGGAAGGGATGGACGAACATACAACCGTGCCTCACGATATT
CCTAATAGAATGTCCAGCATATCAAGTCTCCACAGCAGAGCAAGTGACAGCGACAGTATC
AGTTTATCTTCGCTGGACACTGGAACCTACAGCAGTGATAGCGATTGCGCCATCTCTCGG
ACGAATAAACCAAAGAAACGTATACCAGGTTTACGTATATTTGGCGGGAAAGGAGCTACT
CCTACTAAGAGGCAATTGCGAACGCAGCATGATGCACACCCAAAACTTAGTGTGAGTACA
ACACACACATTTATATCGGTGGAAAGCGGTGAATCCGATCCTAACATACATCACCATAGC
AACGAAACTAGTACCTCTAGAGTGTCCACTCCAGACGTTTTGAACGATTTTGATTTGGAC
GATACTTTGGACTTTGACCTCGCTAACCACGGCACAAATCATACCTCACATGAGCTGGTA
AACGGCTCATTATCAGACGATGAGATGCAGCCACTCTCTGCGTCTAAAGATCAAGTATTT
CACGATGATACAGATGACGATAATTTGCATGGAAGAGGAAGAAAAACAAGAAAATATGAA
AATAAACACGACAAGAGGGACAGTTCACCTTCAGTTTTACTTAAAGGTCAACATCTGGTG
GCATTTGGCAATGAAAATGAGGTGTGAATGCAACGTCGTTATCGCAGTGCAGTGTTACTT
TGATGATACCTGCAGCATATTTTTACTTTAATTTATTTTCTACTCTTCATTGTGACTCAA
TCATTTTCACATTTTATTGTTCTTCAACAGTTATTATTATTATCGTCTAATGCAGTCGCT
TATACATATTTGTCTTTTTTTTAATATTATTAATAAAACTCTATCATAG
| PANTHER |
LRP4 (IPR030799) - T[36-1662] 0.0 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[36-75] 1.57E-7 - T[76-113] 1.2E-10 - T[116-154] 8.77E-9 - T[156-192] 1.57E-9 - T[194-230] 3.93E-8 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[37-74] 1.9E-8 - T[77-112] 3.0E-10 - T[118-154] 1.3E-11 - T[156-192] 1.9E-10 - T[195-233] 1.2E-8 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[38-76] 2.7E-9 - T[77-114] 2.3E-13 - T[118-156] 1.8E-14 - T[157-194] 1.6E-11 - T[195-235] 4.9E-8 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[38-75] 12.438 - T[77-113] 13.812 - T[118-155] 13.562 - T[156-193] 13.1 - T[194-234] 12.113 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[39-74] 1.0228E-9 - T[78-112] 1.92122E-13 - T[157-192] 7.70653E-12 - T[195-228] 2.13049E-9 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[50-71] 1.4E-32 - T[88-109] 1.4E-32 - T[130-151] 1.4E-32 - T[168-189] 1.4E-32 - T[206-227] 1.4E-32 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[90-112] . - T[208-233] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[232-322] 9.42E-11 - T[577-621] 9.42E-11 |
| SMART |
EGF-like_dom (IPR000742) - T[244-281] 0.47 - T[285-321] 0.072 - T[588-622] 0.0038 - T[891-940] 0.045 - T[1211-1251] 0.69 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[282-305] . |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[282-321] 8.012 - T[585-622] 7.104 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[282-321] 9.0E-9 - T[587-622] 0.039 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[282-320] 9.7E-7 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[296-307] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[305-320] . - T[607-621] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[325-626] 1.8E-127 - T[627-942] 1.4E-112 - T[943-1248] 1.1E-96 - T[1249-1564] 5.2E-96 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[347-389] 1.1E-4 - T[390-432] 2.0E-9 - T[433-476] 4.0E-10 - T[477-519] 6.4E-15 - T[520-561] 2.0E-9 - T[650-693] 0.011 - T[694-736] 5.6E-16 - T[737-780] 4.6E-13 - T[781-823] 3.0E-11 - T[824-865] 0.0014 - T[969-1011] 0.0033 - T[1013-1055] 1.3E-7 - T[1056-1099] 4.6E-11 - T[1100-1142] 7.3E-9 - T[1143-1182] 1.6 - T[1279-1321] 1.1E-5 - T[1322-1364] 4.5E-12 - T[1365-1408] 9.9E-14 - T[1409-1454] 1.8E-8 - T[1455-1494] 1.8 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[367-409] 13.196 - T[410-452] 14.635 - T[453-496] 14.774 - T[497-539] 15.47 - T[540-580] 6.397 - T[671-713] 17.094 - T[714-756] 15.029 - T[757-800] 15.586 - T[801-843] 13.753 - T[844-868] 5.121 - T[989-1032] 11.154 - T[1033-1075] 13.451 - T[1076-1119] 14.704 - T[1120-1145] 7.998 - T[1160-1205] 8.857 - T[1299-1341] 12.825 - T[1342-1384] 15.981 - T[1385-1428] 14.333 - T[1430-1459] 9.089 - T[1472-1518] 7.673 |
| Pfam |
LDLR_classB_rpt (IPR000033) - T[411-450] 4.7E-8 - T[453-494] 2.9E-11 - T[497-536] 7.5E-7 - T[671-711] 1.8E-10 - T[714-752] 4.3E-7 - T[758-797] 2.2E-8 - T[802-840] 6.7E-8 - T[1033-1072] 1.9E-8 - T[1076-1116] 3.1E-11 - T[1299-1339] 3.2E-7 - T[1343-1382] 2.2E-11 - T[1385-1425] 1.5E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 33.525 % | 836 | 0 |
| LRP4_HUMAN | 50.125 % | 1613 | 0 |
| LRP6_HUMAN | 38.548 % | 857 | 0 |