- Transcript 'KH2012:KH.C10.148.v2...' >
- Transcript 'KH2012:KH.L18.18.v2....' >
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- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113996.g13287.03.t
Possible name(s)
CDH2; CDH4; CDH6
Gene model
Location
S113996 [3,486 / 13,602]
Amino acid sequence
Length: 874
>Moocul.CG.ELv1_2.S113996.g13287.03.p
MKDERKGLTIFFYSYMKFNFVISSFLALSAIRNMKTIFIVSLLIATVYGKFTITANNKRI
LESLVRHRAKRAWSYPDVSIIENSRSNTYPAGTYLMKIQSDKTDPGITYSVENPPAALKL
PTNENVNDWFEMIIETGSDNQNYGALYTKREFDREEYTKWKIQLAAKYANGQNVEDALVI
GVNILDVDDNKPKLKQESLDQQFSEKANAGENLFTLQYTDADDKLQGQNAVATFYKVSEY
SDGVVSDYLDIMESGVVKLKQKVDYEAVKNIELKVSMTSSGRPMVSPTSDPGETVVVTVV
DGNDNAPEMKPVPETEVEETKLVGTTVLTIQATDSDSAAINNAAYFEIIRGDPVGQWRID
NVPSDGGTSFGHLVINDQLDYEPGPRTYNLGIRAYNKKIDGTKDLDVISEMSIQIVVLDV
NEPPVFDNDNYQATVKEGTATGQKVIKITAGDGDSGEQKVTYKLSDPYSWFAINEGDGQI
TVLTPPDREMLDTHVNYNNASDRNIYYNIQVIATDDLAASSTTILKMTIEDQNDEKPILS
AGSEIVTICNKGRTTTNVSTLTAYDKDTVDSLPLTIEFAKSAENDEAVANGPWYMDKTSD
TTFSLLLAKDREFDSGQQDIELVVVIADKGHLTTTSTVTVKVCDCGGENDPQNCKLPIAA
GGFLIPIIIAIIIIIILVDGTPECLATQGANFPLYIGIIAAVILLLIIILAIVVYKRKQA
ADDAKGGLLYEDEDDVRENLQVYHDEGGGEEDQDAFDITALQQPLEEPRGPRVIDMKPVE
SAEPQPRLPRNIPGDDIEKYIDDAKAQADKDPTAPPFDSLLVFDYEGTGSDAGSLSSLNS
GTTDGSQDYQYLRDWGPRFENLADMYGQGSDTDE
Nucleotide sequence
Length: 3,230
>Moocul.CG.ELv1_2.S113996.g13287.03.t
ATGAAAGACGAAAGGAAGGGATTAACCATCTTTTTTTATTCGTACATGAAATTTAATTTT
GTAATTTCTTCATTCTTGGCGCTGAGCGCAATCCGAAACATGAAGACAATCTTCATTGTC
TCGCTGTTGATCGCAACTGTTTATGGAAAATTCACGATCACAGCCAACAACAAAAGAATT
TTAGAATCCCTTGTGAGGCACCGCGCAAAGAGAGCATGGTCGTATCCAGATGTATCAATA
ATAGAAAATTCGAGATCAAATACATATCCGGCAGGAACTTATTTAATGAAGATTCAATCT
GACAAGACAGATCCTGGCATTACATACTCTGTTGAAAATCCACCTGCTGCATTGAAACTG
CCAACAAATGAAAATGTTAACGACTGGTTTGAAATGATCATAGAAACTGGAAGCGACAAT
CAGAATTACGGTGCTTTGTATACTAAAAGAGAATTTGATCGTGAGGAATATACAAAATGG
AAGATCCAATTGGCTGCCAAATACGCAAATGGACAAAATGTGGAAGATGCACTCGTTATT
GGAGTGAATATTCTTGATGTGGATGACAATAAACCAAAGTTGAAACAGGAGTCTTTAGAT
CAGCAATTTTCGGAGAAGGCGAATGCTGGGGAAAATTTATTCACTTTGCAATACACCGAC
GCTGATGACAAGCTACAAGGCCAAAATGCCGTAGCAACATTCTACAAAGTTTCCGAATAT
TCTGATGGGGTGGTATCGGATTACTTGGACATTATGGAAAGTGGCGTGGTCAAGTTGAAA
CAGAAAGTGGACTACGAAGCTGTCAAGAATATCGAATTAAAAGTTTCCATGACGTCTTCT
GGGAGACCAATGGTTTCACCCACAAGTGATCCTGGCGAAACTGTCGTGGTAACTGTTGTT
GACGGCAACGATAATGCACCAGAAATGAAGCCGGTCCCGGAGACGGAAGTCGAAGAGACG
AAACTTGTTGGAACGACGGTGCTGACCATACAAGCCACCGATAGTGACAGCGCAGCTATA
AATAACGCGGCTTACTTTGAAATAATTCGAGGGGATCCGGTTGGTCAGTGGAGGATCGAC
AATGTACCAAGTGATGGAGGAACTAGTTTTGGCCATCTTGTAATTAATGACCAGTTAGAT
TACGAGCCTGGTCCACGAACATACAATCTCGGTATTCGAGCTTACAACAAGAAGATTGAT
GGAACAAAGGATCTGGATGTGATTTCGGAAATGTCAATCCAAATTGTAGTTTTGGACGTG
AACGAGCCTCCGGTATTCGATAATGATAATTACCAAGCAACTGTGAAGGAAGGGACAGCA
ACGGGACAGAAGGTCATAAAAATAACAGCAGGGGATGGAGATTCTGGTGAACAAAAAGTA
ACGTACAAATTGTCGGATCCATACAGCTGGTTTGCCATCAACGAAGGTGATGGCCAGATC
ACGGTCTTGACGCCACCAGATCGAGAAATGTTGGACACGCATGTGAATTATAACAATGCA
TCAGATCGGAACATTTATTACAATATTCAAGTCATAGCAACAGATGACCTTGCCGCGAGC
TCTACGACGATTCTTAAAATGACAATCGAGGATCAAAACGACGAGAAGCCCATCCTCAGC
GCAGGCAGCGAAATCGTGACAATATGCAACAAAGGACGAACGACTACCAACGTGTCGACC
TTAACAGCCTACGACAAGGACACTGTGGACAGTTTGCCACTGACCATCGAGTTTGCAAAG
TCGGCAGAAAACGACGAAGCAGTGGCCAATGGACCGTGGTATATGGACAAAACTTCCGAC
ACCACATTCAGTTTATTGCTGGCGAAAGACCGTGAATTTGATTCGGGGCAGCAGGATATC
GAGCTAGTGGTCGTGATAGCCGATAAAGGCCATCTAACAACCACCTCTACTGTTACTGTG
AAAGTTTGCGACTGTGGGGGCGAAAACGACCCTCAGAATTGCAAATTGCCGATCGCTGCC
GGCGGCTTCCTTATACCAATAATAATCGCCATTATTATTATCATTATTCTCGTTGATGGA
ACACCTGAATGTCTTGCCACGCAAGGTGCTAACTTCCCGTTATACATCGGGATAATTGCC
GCGGTTATTCTCTTGTTAATAATCATCCTTGCAATCGTCGTTTACAAGAGGAAGCAAGCA
GCAGATGATGCTAAAGGAGGACTTCTATATGAAGATGAGGATGATGTTCGAGAGAATCTT
CAAGTTTATCATGATGAAGGAGGTGGAGAGGAGGACCAGGATGCCTTCGATATCACAGCA
TTACAACAACCACTAGAGGAGCCACGTGGTCCGCGTGTCATTGACATGAAACCTGTAGAA
AGCGCTGAACCGCAACCACGACTTCCACGGAACATCCCCGGGGACGATATCGAGAAATAT
ATCGACGATGCAAAAGCTCAGGCAGACAAAGACCCAACTGCCCCGCCATTTGATTCATTG
TTGGTGTTTGACTACGAGGGTACCGGGTCGGATGCCGGGTCACTTTCCTCTTTGAACTCT
GGCACAACGGACGGTTCCCAGGACTACCAGTACTTGAGAGATTGGGGACCAAGGTTCGAA
AATCTTGCCGATATGTACGGGCAGGGATCGGACACGGATGAATAAGCAGAAACAACGGCA
GTGAAATAAATGGACAATTTGACAAACTTCTGCCACGCGTCAATCAAATTCCAACTGAAA
CAAAACGCTTTTATAACTTTTTCTAACGAATGAACTGAGCAAAGGTCATTCCATATTGTT
ACATCACTGTTACCTTTCCAATATTCATATTTTTTACAAACGGCCAAATTTTAACCCCAA
CTTTTTAGTTTTAAAATTTTAATAATCTTAGGGCAATTGACTGACATTCATATCATTTAT
TGACATATAATAATTATTATTTAATTGTACTTGTGAAGTTTTCTGGCAAAACTTTTAACT
CGGAGGTACGCGACTTGACATGGCTTATATGGTACAAAGATTGCGAAATTTGTGATCGTT
CAAAACAGAATGCAATTATTTCATCACACAGTTTCATTGTTAGACATTTCTGTACATAAT
CGTTTATTATTAATTGACAATCCTTATTGTGATGGAAAGTACTTTTTGTATTTTTCTCTG
TTCTTATTTGCAATGTGTTCTGTATCTTTTGGTAGTGACGGGCTAAACTTGTGTTAAACC
ACATTTAAACCTGAAGAACTTTTATTAATAAACGCTGGTAATATTTCTAA
| SMART |
Cadherin (IPR002126) - T[97-192] 1.4E-4 - T[216-307] 0.0015 - T[330-425] 0.0042 - T[448-537] 9.0E-9 - T[561-651] 0.13 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[107-194] 4.06E-5 - T[182-308] 1.1E-10 - T[303-419] 1.57E-10 - T[415-546] 3.66E-18 - T[533-644] 8.25E-8 |
| PRINTS |
Cadherin (IPR002126) - T[135-154] 1.1E-13 - T[194-223] 1.1E-13 - T[288-307] 1.1E-13 - T[424-437] 1.1E-13 - T[476-502] 1.1E-13 - T[521-538] 1.1E-13 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[297-307] . |
| Pfam |
Cadherin (IPR002126) - T[315-414] 3.7E-11 - T[431-528] 2.1E-8 |
| Pfam |
Cadherin_cytoplasmic-dom (IPR000233) - T[726-868] 8.5E-48 |
| Gene3D |
Catenin_binding_dom_sf (IPR027397) - T[775-872] 2.1E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADH4_HUMAN | 31.384 % | 276 | 1.35E-79 |
| CADH6_HUMAN | 28.777 % | 244 | 6.18E-69 |
| CADH2_HUMAN | 31.325 % | 246 | 4.12E-69 |