- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113996.g13287.04.t
Possible name(s)
CDH2; CDH4; CDH6
Gene model
Location
S113996 [7,866 / 13,602]
Amino acid sequence
Length: 704
>Moocul.CG.ELv1_2.S113996.g13287.04.p
MKDERKGLTIFFYSYMKFNFVISSFLALSAIRNMKTIFIVSLLIATVYGKFTITANNKRI
LESLVRHRAKRAWSYPDVSIIENSRSNTYPAGTYLMKIQSDKTDPGITYSVENPPAALKL
PTNENVNDWFEMIIETGSDNQNYGALYTKREFDREEYTKWKIQLAAKYANGQNVEDALVI
GVNILDVDDNKPKLKQESLDQQFSEKANAGENLFTLQYTDADDKLQGQNAVATFYKVSEY
SDGVVSDYLDIMESGVVKLKQKVDYEAVKNIELKVSMTSSGRPMVSPTSDPGETVVVTVV
DGNDNAPEMKPVPETEVEETKLVGTTVLTIQATDSDSAAINNAAYFEIIRGDPVGQWRID
NVPSDGGTSFGHLVINDQLDYEPGPRTYNLGIRAYNKKIDGTKDLDVISEMSIQIVVLDV
NEPPVFDNDNYQATVKEGTATGQKVIKITAGDGDSGEQKVTYKLSDPYSWFAINEGDGQI
TVLTPPDREMLDTHVNYNNASDRNIYYNIQVIATDDLAASSTTILKMTIEDQNDEKPILS
AGSEIVTICNKGRTTTNVSTLTAYDKDTVDSLPLTIEFAKSAENDEAVANGPWYMDKTSD
TTFSLLLAKDREFDSGQQDIELVVVIADKGHLTTTSTVTVKVCDCGGENDPQNCKLPIAA
GGFLIPIIIAIIIIIILVDAKSTKAALLLTARYLQNHSWLSYRL
Nucleotide sequence
Length: 2,115
>Moocul.CG.ELv1_2.S113996.g13287.04.t
ATGAAAGACGAAAGGAAGGGATTAACCATCTTTTTTTATTCGTACATGAAATTTAATTTT
GTAATTTCTTCATTCTTGGCGCTGAGCGCAATCCGAAACATGAAGACAATCTTCATTGTC
TCGCTGTTGATCGCAACTGTTTATGGAAAATTCACGATCACAGCCAACAACAAAAGAATT
TTAGAATCCCTTGTGAGGCACCGCGCAAAGAGAGCATGGTCGTATCCAGATGTATCAATA
ATAGAAAATTCGAGATCAAATACATATCCGGCAGGAACTTATTTAATGAAGATTCAATCT
GACAAGACAGATCCTGGCATTACATACTCTGTTGAAAATCCACCTGCTGCATTGAAACTG
CCAACAAATGAAAATGTTAACGACTGGTTTGAAATGATCATAGAAACTGGAAGCGACAAT
CAGAATTACGGTGCTTTGTATACTAAAAGAGAATTTGATCGTGAGGAATATACAAAATGG
AAGATCCAATTGGCTGCCAAATACGCAAATGGACAAAATGTGGAAGATGCACTCGTTATT
GGAGTGAATATTCTTGATGTGGATGACAATAAACCAAAGTTGAAACAGGAGTCTTTAGAT
CAGCAATTTTCGGAGAAGGCGAATGCTGGGGAAAATTTATTCACTTTGCAATACACCGAC
GCTGATGACAAGCTACAAGGCCAAAATGCCGTAGCAACATTCTACAAAGTTTCCGAATAT
TCTGATGGGGTGGTATCGGATTACTTGGACATTATGGAAAGTGGCGTGGTCAAGTTGAAA
CAGAAAGTGGACTACGAAGCTGTCAAGAATATCGAATTAAAAGTTTCCATGACGTCTTCT
GGGAGACCAATGGTTTCACCCACAAGTGATCCTGGCGAAACTGTCGTGGTAACTGTTGTT
GACGGCAACGATAATGCACCAGAAATGAAGCCGGTCCCGGAGACGGAAGTCGAAGAGACG
AAACTTGTTGGAACGACGGTGCTGACCATACAAGCCACCGATAGTGACAGCGCAGCTATA
AATAACGCGGCTTACTTTGAAATAATTCGAGGGGATCCGGTTGGTCAGTGGAGGATCGAC
AATGTACCAAGTGATGGAGGAACTAGTTTTGGCCATCTTGTAATTAATGACCAGTTAGAT
TACGAGCCTGGTCCACGAACATACAATCTCGGTATTCGAGCTTACAACAAGAAGATTGAT
GGAACAAAGGATCTGGATGTGATTTCGGAAATGTCAATCCAAATTGTAGTTTTGGACGTG
AACGAGCCTCCGGTATTCGATAATGATAATTACCAAGCAACTGTGAAGGAAGGGACAGCA
ACGGGACAGAAGGTCATAAAAATAACAGCAGGGGATGGAGATTCTGGTGAACAAAAAGTA
ACGTACAAATTGTCGGATCCATACAGCTGGTTTGCCATCAACGAAGGTGATGGCCAGATC
ACGGTCTTGACGCCACCAGATCGAGAAATGTTGGACACGCATGTGAATTATAACAATGCA
TCAGATCGGAACATTTATTACAATATTCAAGTCATAGCAACAGATGACCTTGCCGCGAGC
TCTACGACGATTCTTAAAATGACAATCGAGGATCAAAACGACGAGAAGCCCATCCTCAGC
GCAGGCAGCGAAATCGTGACAATATGCAACAAAGGACGAACGACTACCAACGTGTCGACC
TTAACAGCCTACGACAAGGACACTGTGGACAGTTTGCCACTGACCATCGAGTTTGCAAAG
TCGGCAGAAAACGACGAAGCAGTGGCCAATGGACCGTGGTATATGGACAAAACTTCCGAC
ACCACATTCAGTTTATTGCTGGCGAAAGACCGTGAATTTGATTCGGGGCAGCAGGATATC
GAGCTAGTGGTCGTGATAGCCGATAAAGGCCATCTAACAACCACCTCTACTGTTACTGTG
AAAGTTTGCGACTGTGGGGGCGAAAACGACCCTCAGAATTGCAAATTGCCGATCGCTGCC
GGCGGCTTCCTTATACCAATAATAATCGCCATTATTATTATCATTATTCTCGTTGATGCA
AAATCAACGAAAGCGGCGTTACTTTTGACTGCCCGCTACCTCCAAAACCATTCGTGGCTC
TCATACCGATTATAA
| SMART |
Cadherin (IPR002126) - T[97-192] 1.4E-4 - T[216-307] 0.0015 - T[330-425] 0.0042 - T[448-537] 9.0E-9 - T[561-651] 0.13 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[107-194] 2.88E-5 - T[182-308] 6.15E-11 - T[303-419] 1.06E-10 - T[415-542] 3.53E-18 - T[533-644] 6.02E-8 |
| PRINTS |
Cadherin (IPR002126) - T[135-154] 3.3E-14 - T[194-223] 3.3E-14 - T[288-307] 3.3E-14 - T[424-437] 3.3E-14 - T[476-502] 3.3E-14 - T[521-538] 3.3E-14 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[297-307] . |
| Pfam |
Cadherin (IPR002126) - T[315-414] 2.6E-11 - T[431-528] 1.5E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELR2_HUMAN | 27.475 % | 136 | 8.41E-33 |
| CADH4_HUMAN | 27.432 % | 153 | 1.05E-38 |
| CADH3_HUMAN | 27.432 % | 137 | 1.82E-33 |