- Transcript 'KH2012:KH.C11.49.v2....' >
- Transcript 'Haaura.CG.MTP2014.S9...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S114851.g13719.01.t
Possible name(s)
MTREX; SKIV2L
Gene model
Location
S114851 [68,044 / 71,152]
Amino acid sequence
Length: 1,035
>Moocul.CG.ELv1_2.S114851.g13719.01.p
MSNFGDNLFSVFDDEETEKPCTSESLKRKSNDVPVAMETNQDKGDFGEEIKQAVLRARKD
NDDMVKKKAKLEDDFELSSILESLPQVETKPMEALISGCTHDIAYNIGMDIPPLKPREGP
PAKEYKFLLDPFQQEALLCLDNNQSVLVSAHTSAGKTVVAEYAIAMSLKKKQRVIYTTPI
KALSNQKYRELYEEFSDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVVF
DEIHYMRNKERGVVWEETIILLPDNVRYVFLSATIPNARQFAEWVCHLHRQPCHVVYTDY
RPVPLQHYVFPAGGDGLHLVVDENGNFREDNFNAAMAILRDSGDNSKSDFNRRGRKGGQT
GDSSCLKIVKMIIERSFQPVIVFSFSKKECEFYAMQVSKLDFNTEDEKNLVNEVFTNAID
SLSEEDQKLPQVEAVLPLLKKGIGIHHGGLLPLLKETIEILFSEGLIKCLFATETFAMGV
NMPARTVLFTGCRKFDGKDFRWITGGEYIQMSGRAGRRGMDDRGLVIMMVDEKMSPSVGK
NLLKGNPDPLNSAFRLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYKAIPELLTKVENLE
KKMAAIKIPDEDSAMNYFKIRQQLKKLSVQQEQFIHKPKYCLPFMQPGRLVHVRNFADDL
GWGVVVFFQKAPKTGGNDKDDEPEYIVDVLLHVASSSIDKKNTKLPKPAGFEGSDKNEMA
VIPIMINLITAISSVRLYLPKDLRQKDNRQSVLRSLNEVKKRFPDGLPLLDPVEDLGIRD
EKLKVIVQKVESFEKRMFQHEMHNKEECKNVYEQCQKKSELETDIKNSKKELKKARTVIQ
MDELKCRKRVLRRLGYAAMNDAIETKGRVACEISSSDELLLTELIFNGVFNTLTVEQTCA
LLSCFVFDEKAKDVPKLSENLAAPLRIMKETARRIAKISTEAKLDLEEEAYVERFKHTLM
DVVHAWCSGASFGEICRMTEIFEGSIIRCMRRLEELLREMCHAAKAIGNTELENKFAKGM
TTMKRDIVFAASLYL
Nucleotide sequence
Length: 3,108
>Moocul.CG.ELv1_2.S114851.g13719.01.t
ATGTCAAATTTCGGTGACAATTTGTTCAGTGTGTTTGATGATGAGGAAACTGAGAAACCA
TGCACTTCAGAATCGTTGAAGAGGAAGAGCAACGATGTGCCTGTTGCAATGGAAACGAAT
CAAGACAAAGGAGACTTTGGTGAAGAAATCAAACAAGCTGTTTTGAGAGCGAGAAAGGAC
AATGACGACATGGTAAAGAAAAAGGCAAAACTGGAGGATGATTTTGAGTTATCAAGCATT
TTGGAGTCTTTGCCTCAAGTTGAAACTAAACCAATGGAAGCTCTTATATCAGGATGTACT
CACGATATTGCTTATAATATTGGAATGGATATTCCTCCATTAAAACCAAGAGAAGGCCCA
CCCGCCAAAGAATACAAGTTTTTACTCGATCCTTTTCAGCAAGAAGCATTGCTATGCCTT
GATAATAATCAATCAGTTCTTGTTTCTGCTCATACCTCTGCTGGGAAAACTGTAGTTGCT
GAATATGCTATTGCAATGTCATTAAAGAAAAAGCAAAGAGTGATATACACAACTCCAATT
AAAGCTTTAAGTAATCAGAAATATCGGGAACTTTATGAAGAATTTTCTGATGTTGGGTTA
ATGACTGGCGATGTTACTATCAATCCAACTGCATCATGCTTGGTAATGACAACTGAAATT
TTACGTAGCATGCTGTATCGTGGATCTGAGGTTATGAGGGAAGTGGCGTGGGTCGTATTT
GATGAAATTCATTACATGAGAAACAAAGAACGAGGAGTTGTTTGGGAAGAAACAATTATT
TTACTACCGGACAATGTACGATATGTCTTTCTTTCCGCTACTATTCCAAATGCTCGTCAG
TTTGCAGAATGGGTCTGTCATCTGCATCGGCAGCCATGCCATGTTGTTTATACTGATTAC
CGACCAGTTCCTTTACAACATTATGTTTTTCCAGCTGGCGGCGATGGCCTGCATCTTGTT
GTGGATGAAAATGGAAACTTTCGGGAAGATAATTTCAACGCTGCTATGGCGATTCTTCGA
GATTCTGGTGATAATTCGAAGAGTGATTTTAACAGAAGAGGAAGAAAGGGTGGTCAAACT
GGTGACTCGAGCTGTTTAAAAATTGTTAAAATGATCATTGAAAGAAGTTTTCAACCGGTG
ATTGTCTTTAGTTTCAGCAAGAAAGAATGCGAATTTTACGCCATGCAAGTTTCTAAACTT
GATTTTAACACTGAAGATGAAAAAAACCTTGTGAATGAAGTTTTTACGAATGCTATCGAC
TCATTGTCTGAGGAAGACCAAAAACTACCACAAGTTGAAGCTGTACTGCCTTTGTTGAAA
AAGGGAATTGGCATACATCACGGTGGTCTGTTGCCATTGTTGAAAGAAACGATTGAGATT
TTGTTCTCAGAGGGATTAATCAAATGCCTTTTTGCAACCGAGACTTTTGCGATGGGCGTT
AATATGCCGGCCAGGACAGTGTTGTTTACAGGTTGCCGGAAATTTGATGGTAAAGATTTT
CGTTGGATTACTGGTGGAGAGTATATTCAAATGAGTGGACGAGCAGGTAGAAGAGGGATG
GACGATAGAGGTCTCGTGATTATGATGGTTGATGAAAAGATGTCACCAAGTGTTGGAAAA
AATCTGTTAAAGGGAAACCCGGATCCACTGAACTCAGCTTTTCGATTGACCTACAACATG
GTTCTTAATCTTTTAAGGGTGGAAGAAATCAATCCTGAATACATGCTGGAAAAATCATTT
TATCAATTCCAGCACTACAAAGCTATCCCTGAACTTCTTACAAAAGTTGAGAACTTGGAA
AAGAAGATGGCTGCTATAAAAATTCCCGATGAAGATTCTGCCATGAATTATTTTAAAATT
CGTCAGCAGTTGAAGAAGTTATCTGTACAGCAAGAACAGTTTATTCACAAACCCAAGTAC
TGCTTGCCATTCATGCAGCCAGGTAGGTTGGTTCATGTTCGAAATTTTGCTGATGATCTT
GGTTGGGGTGTGGTTGTATTTTTTCAGAAAGCACCTAAAACTGGTGGAAACGATAAAGAC
GATGAACCAGAATATATTGTGGATGTTCTTCTTCATGTAGCAAGCAGCAGCATCGATAAG
AAGAACACAAAACTGCCAAAACCTGCTGGCTTCGAAGGATCTGATAAAAACGAAATGGCT
GTAATTCCAATCATGATCAATCTCATAACCGCAATAAGTAGCGTTAGACTTTACCTGCCA
AAAGATTTGAGACAAAAAGACAACAGACAATCTGTTTTGCGATCTTTGAATGAAGTCAAG
AAGAGATTTCCGGATGGCCTTCCCCTGTTGGATCCAGTCGAAGATCTTGGAATACGAGAT
GAAAAGTTGAAAGTGATTGTTCAGAAAGTGGAATCGTTTGAAAAGCGAATGTTTCAACAT
GAGATGCACAACAAGGAAGAATGCAAGAACGTTTATGAGCAATGTCAAAAGAAAAGTGAA
TTAGAAACTGACATCAAAAATTCAAAGAAGGAACTGAAAAAAGCACGAACTGTCATTCAG
ATGGACGAACTCAAATGCAGAAAACGAGTTTTGAGAAGGTTGGGTTATGCCGCAATGAAT
GATGCTATTGAAACCAAAGGAAGAGTTGCCTGCGAAATAAGTTCATCAGATGAATTGCTG
TTAACTGAACTTATATTTAACGGTGTTTTTAACACTCTCACTGTTGAGCAAACGTGTGCT
TTGTTGAGTTGTTTTGTGTTCGATGAAAAGGCGAAGGATGTACCAAAGTTGTCGGAAAAC
CTCGCAGCTCCGTTAAGAATCATGAAGGAAACTGCACGACGAATCGCAAAGATATCGACC
GAAGCAAAACTGGATTTGGAAGAAGAAGCTTATGTTGAGAGATTCAAACATACACTGATG
GATGTTGTTCATGCCTGGTGTTCAGGTGCAAGTTTTGGTGAAATTTGTCGAATGACGGAG
ATATTTGAAGGCAGCATCATCCGATGTATGCGAAGACTTGAAGAACTTCTTCGTGAAATG
TGCCACGCTGCAAAAGCAATTGGAAACACTGAACTTGAAAATAAATTTGCTAAAGGAATG
ACGACGATGAAACGTGATATTGTGTTTGCTGCTAGTTTATACTTATAA
| PIRSF |
Ski2-like (IPR016438) - T[6-1035] 0.0 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[125-308] 2.4E-32 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[131-276] 5.0E-17 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[137-293] 23.731 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[140-278] 4.26E-48 - T[343-399] 4.26E-48 - T[439-533] 4.26E-48 |
| CDD |
Helicase_C (IPR001650) - T[365-529] 1.82647E-15 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[396-568] 12.924 |
| Pfam |
Helicase_C (IPR001650) - T[414-519] 3.9E-6 |
| SMART |
Helicase_C (IPR001650) - T[430-519] 6.4E-18 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[573-834] 2.4E-82 |
| SMART |
Ski2_C (IPR012961) - T[858-1035] 8.2E-92 |
| Pfam |
Ski2_C (IPR012961) - T[861-1030] 5.4E-57 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ASCC3_HUMAN | 27.669 % | 119 | 6.31E-27 |
| MTREX_HUMAN | 67.018 % | 1469 | 0 |
| SKIV2_HUMAN | 36.062 % | 578 | 0 |